BLASTX nr result

ID: Coptis25_contig00021682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021682
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34594.3| unnamed protein product [Vitis vinifera]              234   7e-60
ref|XP_002299423.1| predicted protein [Populus trichocarpa] gi|2...   231   5e-59
gb|AFZ78635.1| korrigan [Populus tomentosa]                           230   1e-58
dbj|BAA06877.1| cellulase precursor [Populus alba]                    230   1e-58
gb|AAB65155.1| acidic cellulase [Citrus sinensis]                     227   9e-58

>emb|CBI34594.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  234 bits (596), Expect = 7e-60
 Identities = 111/131 (84%), Positives = 123/131 (93%)
 Frame = +2

Query: 110 MLSLCCSAFTSEDYSNALGKSILFFEGQRSGKLPSSQRLTWRGDSALSDGTSYHVDLVGG 289
           +L+L CSAFTS+DY++AL KSILF+EGQRSGKLPSSQRLTWRGDS LSDG+SYHVDLVGG
Sbjct: 20  LLTLSCSAFTSKDYADALAKSILFYEGQRSGKLPSSQRLTWRGDSGLSDGSSYHVDLVGG 79

Query: 290 YYDAGDNVKFGLPMAFTTTMLSWSVIEFGSLMRGEVQNARAAIRWSTDYLLKAATATPNT 469
           YYDAGDNVKFGLPMAFTTT+L+WSVIEFG+ M  ++ NARAAIRWSTDYLLKAATATP T
Sbjct: 80  YYDAGDNVKFGLPMAFTTTLLAWSVIEFGNSMPSQIGNARAAIRWSTDYLLKAATATPGT 139

Query: 470 LYVQVGDPNMD 502
           LYVQVGDPNMD
Sbjct: 140 LYVQVGDPNMD 150


>ref|XP_002299423.1| predicted protein [Populus trichocarpa] gi|222846681|gb|EEE84228.1|
           predicted protein [Populus trichocarpa]
           gi|347466577|gb|AEO97201.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466631|gb|AEO97228.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 494

 Score =  231 bits (589), Expect = 5e-59
 Identities = 113/150 (75%), Positives = 130/150 (86%), Gaps = 5/150 (3%)
 Frame = +2

Query: 68  MAFNRIFWLMQLTWMLSLCCS-----AFTSEDYSNALGKSILFFEGQRSGKLPSSQRLTW 232
           MA    F LM   + ++ CC      AFTS+DY+NAL KSILFFEGQRSGKLPS+QRLTW
Sbjct: 1   MANATTFSLMLQFFFITFCCLSYFSFAFTSQDYANALEKSILFFEGQRSGKLPSNQRLTW 60

Query: 233 RGDSALSDGTSYHVDLVGGYYDAGDNVKFGLPMAFTTTMLSWSVIEFGSLMRGEVQNARA 412
           RGDS LSDG++YHV+LVGGYYDAGDNVKFGLPMAFTTT+L+WSVIEFGS M+ +++NA+A
Sbjct: 61  RGDSGLSDGSTYHVNLVGGYYDAGDNVKFGLPMAFTTTLLAWSVIEFGSSMQNQIENAKA 120

Query: 413 AIRWSTDYLLKAATATPNTLYVQVGDPNMD 502
           AIRWSTDYLLKAATATP+TLYVQVGDPNMD
Sbjct: 121 AIRWSTDYLLKAATATPDTLYVQVGDPNMD 150


>gb|AFZ78635.1| korrigan [Populus tomentosa]
          Length = 494

 Score =  230 bits (586), Expect = 1e-58
 Identities = 112/150 (74%), Positives = 129/150 (86%), Gaps = 5/150 (3%)
 Frame = +2

Query: 68  MAFNRIFWLMQLTWMLSLCCS-----AFTSEDYSNALGKSILFFEGQRSGKLPSSQRLTW 232
           MA    F LM   + ++ CC      AFTS+DY+NAL KSILFFEGQRSGKLPS+QRLTW
Sbjct: 1   MASATTFSLMLQFFFITFCCLSYFSFAFTSQDYANALEKSILFFEGQRSGKLPSNQRLTW 60

Query: 233 RGDSALSDGTSYHVDLVGGYYDAGDNVKFGLPMAFTTTMLSWSVIEFGSLMRGEVQNARA 412
           RGDS LSDG++YHV+LVGGYYDAGDNVKFGLPMAFTTT+L+WSVIEFGS M+ ++ NA+A
Sbjct: 61  RGDSGLSDGSTYHVNLVGGYYDAGDNVKFGLPMAFTTTLLAWSVIEFGSSMQNQITNAKA 120

Query: 413 AIRWSTDYLLKAATATPNTLYVQVGDPNMD 502
           AIRWSTDYLLKAATATP+TLY+QVGDPNMD
Sbjct: 121 AIRWSTDYLLKAATATPDTLYIQVGDPNMD 150


>dbj|BAA06877.1| cellulase precursor [Populus alba]
          Length = 494

 Score =  230 bits (586), Expect = 1e-58
 Identities = 112/150 (74%), Positives = 130/150 (86%), Gaps = 5/150 (3%)
 Frame = +2

Query: 68  MAFNRIFWLMQLTWMLSLCCS-----AFTSEDYSNALGKSILFFEGQRSGKLPSSQRLTW 232
           MA    F LM   + ++ CC      AFTS+DY+NAL KSILFFEGQRSGKLPS+QRL W
Sbjct: 1   MANATTFSLMLQFFFVTFCCLSYFSFAFTSQDYANALEKSILFFEGQRSGKLPSNQRLAW 60

Query: 233 RGDSALSDGTSYHVDLVGGYYDAGDNVKFGLPMAFTTTMLSWSVIEFGSLMRGEVQNARA 412
           RGDS LSDG++YHV+LVGGYYDAGDNVKFGLPMAFTTT+L+WSVIEFG+LM+ +++NA+A
Sbjct: 61  RGDSGLSDGSTYHVNLVGGYYDAGDNVKFGLPMAFTTTLLAWSVIEFGTLMQNQIENAKA 120

Query: 413 AIRWSTDYLLKAATATPNTLYVQVGDPNMD 502
           AIRWSTDYLLKAATATP+TLYVQVGDPNMD
Sbjct: 121 AIRWSTDYLLKAATATPDTLYVQVGDPNMD 150


>gb|AAB65155.1| acidic cellulase [Citrus sinensis]
          Length = 505

 Score =  227 bits (578), Expect = 9e-58
 Identities = 107/130 (82%), Positives = 120/130 (92%)
 Frame = +2

Query: 113 LSLCCSAFTSEDYSNALGKSILFFEGQRSGKLPSSQRLTWRGDSALSDGTSYHVDLVGGY 292
           LSL CSAFT +DYS+ALGKSILFFEGQRSG+LP +Q+LTWRG+S LSDG+SYHVDLVGGY
Sbjct: 29  LSLLCSAFTFQDYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDLVGGY 88

Query: 293 YDAGDNVKFGLPMAFTTTMLSWSVIEFGSLMRGEVQNARAAIRWSTDYLLKAATATPNTL 472
           YDAGDNVKFGLPMAFTTT+LSWSVIEFGS M+  ++NA+AAIRW TDYLLKA+TATP  L
Sbjct: 89  YDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGAL 148

Query: 473 YVQVGDPNMD 502
           YVQVGDPNMD
Sbjct: 149 YVQVGDPNMD 158


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