BLASTX nr result
ID: Coptis25_contig00021681
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021681 (397 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632018.1| PREDICTED: uncharacterized protein LOC100853... 97 2e-18 emb|CAN66891.1| hypothetical protein VITISV_042965 [Vitis vinifera] 97 2e-18 gb|AAL58216.1|AC090882_19 putative transposon protein [Oryza sat... 96 4e-18 ref|NP_001051075.2| Os03g0714800 [Oryza sativa Japonica Group] g... 96 4e-18 gb|ABF98547.1| retrotransposon protein, putative, Ty3-gypsy subc... 96 4e-18 >ref|XP_003632018.1| PREDICTED: uncharacterized protein LOC100853148 [Vitis vinifera] Length = 989 Score = 96.7 bits (239), Expect = 2e-18 Identities = 51/131 (38%), Positives = 67/131 (51%) Frame = +3 Query: 3 KQAYMGHRCFLPDNHPFRSQKSQFNGKEEHGKTPKRLTGDKVLEKVKNLQNVFGKVASRK 182 K +Y GHR FLP NHPFR QK FNG++E PK LTGD++ KV + N +GK K Sbjct: 355 KNSYTGHRRFLPCNHPFRKQKKAFNGEQEFRLPPKELTGDEIFTKVDMIHNSWGKKKKAK 414 Query: 183 RKKREDDDETAWSKRSILFELPYWEVQF*NSLLSIVV*CLSFKL**TITFVFLQLLVVRN 362 + + + + W K+SI FEL YW + +R+ Sbjct: 415 QCESFANPTSCWKKKSIFFELEYW-----------------------------RYFYIRH 445 Query: 363 NLDVMHVEKNV 395 NLDVMH+EKNV Sbjct: 446 NLDVMHIEKNV 456 >emb|CAN66891.1| hypothetical protein VITISV_042965 [Vitis vinifera] Length = 1736 Score = 96.7 bits (239), Expect = 2e-18 Identities = 51/131 (38%), Positives = 67/131 (51%) Frame = +3 Query: 3 KQAYMGHRCFLPDNHPFRSQKSQFNGKEEHGKTPKRLTGDKVLEKVKNLQNVFGKVASRK 182 K +Y GHR FLP NHPFR QK FNG++E PK LTGD++ KV + N +GK K Sbjct: 440 KNSYTGHRRFLPCNHPFRKQKKAFNGEQEFRLPPKELTGDEIFTKVDMIHNSWGKKKKAK 499 Query: 183 RKKREDDDETAWSKRSILFELPYWEVQF*NSLLSIVV*CLSFKL**TITFVFLQLLVVRN 362 + + + + W K+SI FEL YW + +R+ Sbjct: 500 QCESFANPTSCWKKKSIFFELEYW-----------------------------RYFYIRH 530 Query: 363 NLDVMHVEKNV 395 NLDVMH+EKNV Sbjct: 531 NLDVMHIEKNV 541 >gb|AAL58216.1|AC090882_19 putative transposon protein [Oryza sativa Japonica Group] Length = 1451 Score = 95.5 bits (236), Expect = 4e-18 Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 5/136 (3%) Frame = +3 Query: 3 KQAYMGHRCFLPDNHPFRSQKSQFNGKEEHGKTPKRLTGDKVLEKVKNLQNVFGKVASRK 182 K Y+GHR FLP NH FR + F+G +E P + +G +L++ +NL VFGK +K Sbjct: 263 KTCYLGHRRFLPQNHSFRFDEKSFDGTKELRDAPVQPSGHDILKETENLNVVFGKAEKKK 322 Query: 183 RKKREDDDE-----TAWSKRSILFELPYWEVQF*NSLLSIVV*CLSFKL**TITFVFLQL 347 RK+++DD+ W KRS F LPYWE Sbjct: 323 RKRKDDDNNDGGSTVIWKKRSCFFRLPYWE-----------------------------H 353 Query: 348 LVVRNNLDVMHVEKNV 395 L+VR+NLD+MH+EKNV Sbjct: 354 LLVRHNLDIMHIEKNV 369 >ref|NP_001051075.2| Os03g0714800 [Oryza sativa Japonica Group] gi|255674839|dbj|BAF12989.2| Os03g0714800 [Oryza sativa Japonica Group] Length = 738 Score = 95.5 bits (236), Expect = 4e-18 Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 5/136 (3%) Frame = +3 Query: 3 KQAYMGHRCFLPDNHPFRSQKSQFNGKEEHGKTPKRLTGDKVLEKVKNLQNVFGKVASRK 182 K Y+GHR FLP NH FR + F+G +E P + +G +L++ +NL VFGK +K Sbjct: 76 KTCYLGHRRFLPQNHSFRFDEKSFDGTKELRDAPVQPSGHDILKETENLNVVFGKAEKKK 135 Query: 183 RKKREDDDE-----TAWSKRSILFELPYWEVQF*NSLLSIVV*CLSFKL**TITFVFLQL 347 RK+++DD+ W KRS F LPYWE Sbjct: 136 RKRKDDDNNDGGSTVIWKKRSCFFRLPYWE-----------------------------H 166 Query: 348 LVVRNNLDVMHVEKNV 395 L+VR+NLD+MH+EKNV Sbjct: 167 LLVRHNLDIMHIEKNV 182 >gb|ABF98547.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1449 Score = 95.5 bits (236), Expect = 4e-18 Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 5/136 (3%) Frame = +3 Query: 3 KQAYMGHRCFLPDNHPFRSQKSQFNGKEEHGKTPKRLTGDKVLEKVKNLQNVFGKVASRK 182 K Y+GHR FLP NH FR + F+G +E P + +G +L++ +NL VFGK +K Sbjct: 263 KTCYLGHRRFLPQNHSFRFDEKSFDGTKELRDAPVQPSGHDILKETENLNVVFGKAEKKK 322 Query: 183 RKKREDDDE-----TAWSKRSILFELPYWEVQF*NSLLSIVV*CLSFKL**TITFVFLQL 347 RK+++DD+ W KRS F LPYWE Sbjct: 323 RKRKDDDNNDGGSTVIWKKRSCFFRLPYWE-----------------------------H 353 Query: 348 LVVRNNLDVMHVEKNV 395 L+VR+NLD+MH+EKNV Sbjct: 354 LLVRHNLDIMHIEKNV 369