BLASTX nr result

ID: Coptis25_contig00021670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021670
         (1845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-27
ref|XP_002306048.1| predicted protein [Populus trichocarpa] gi|2...   127   8e-27
ref|XP_002534013.1| transcription factor, putative [Ricinus comm...   122   4e-25
ref|XP_002283546.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   119   2e-24
gb|EIW56296.1| hypothetical protein TRAVEDRAFT_150795, partial [...   119   3e-24

>ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|222866857|gb|EEF03988.1|
            predicted protein [Populus trichocarpa]
          Length = 96

 Score =  129 bits (323), Expect = 3e-27
 Identities = 56/66 (84%), Positives = 60/66 (90%)
 Frame = -2

Query: 1442 YGECQKNHAAKIGGYAVDGCREFMASGEEGTSGALKCAACSCHRNFHRREVDYEVVCECS 1263
            YGECQKNHAA +GGYAVDGCREFMASGEEGT+ AL CAAC CHRNFHRREV+ EV C+CS
Sbjct: 30   YGECQKNHAAGVGGYAVDGCREFMASGEEGTAAALTCAACGCHRNFHRREVETEVACDCS 89

Query: 1262 SPSSNG 1245
            SPSSNG
Sbjct: 90   SPSSNG 95


>ref|XP_002306048.1| predicted protein [Populus trichocarpa] gi|222849012|gb|EEE86559.1|
            predicted protein [Populus trichocarpa]
          Length = 130

 Score =  127 bits (320), Expect = 8e-27
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = -2

Query: 1442 YGECQKNHAAKIGGYAVDGCREFMASGEEGTSGALKCAACSCHRNFHRREVDYEVVCECS 1263
            YGEC KNHAA +GGYAVDGCREFMASGEEGT+ AL CAAC CHRNFHRREV+ EV+C+CS
Sbjct: 64   YGECLKNHAASVGGYAVDGCREFMASGEEGTADALTCAACGCHRNFHRREVETEVICDCS 123

Query: 1262 SPSSNG 1245
            SPSSNG
Sbjct: 124  SPSSNG 129


>ref|XP_002534013.1| transcription factor, putative [Ricinus communis]
            gi|223525986|gb|EEF28371.1| transcription factor,
            putative [Ricinus communis]
          Length = 98

 Score =  122 bits (305), Expect = 4e-25
 Identities = 57/68 (83%), Positives = 61/68 (89%), Gaps = 2/68 (2%)
 Frame = -2

Query: 1442 YGECQKNHAAKIGGYAVDGCREFMAS-GEEGTSGALKCAACSCHRNFHRREVDYE-VVCE 1269
            YGECQKNHAA +GGYAVDGCREFMAS GEEGT+ AL CAAC CHRNFHRREV+ E VVC+
Sbjct: 30   YGECQKNHAANVGGYAVDGCREFMASNGEEGTTAALTCAACGCHRNFHRREVETEQVVCD 89

Query: 1268 CSSPSSNG 1245
            CSSPSSNG
Sbjct: 90   CSSPSSNG 97


>ref|XP_002283546.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Vitis vinifera]
          Length = 95

 Score =  119 bits (299), Expect = 2e-24
 Identities = 53/67 (79%), Positives = 58/67 (86%)
 Frame = -2

Query: 1442 YGECQKNHAAKIGGYAVDGCREFMASGEEGTSGALKCAACSCHRNFHRREVDYEVVCECS 1263
            YGECQKNHAA IGG+AVDGCREFMASG+EGTS  L CAAC CHRNFHRREV+ EV+C CS
Sbjct: 29   YGECQKNHAAGIGGHAVDGCREFMASGQEGTSSELICAACGCHRNFHRREVETEVLCPCS 88

Query: 1262 SPSSNGK 1242
            S  SNG+
Sbjct: 89   SAPSNGR 95


>gb|EIW56296.1| hypothetical protein TRAVEDRAFT_150795, partial [Trametes
           versicolor FP-101664 SS1]
          Length = 490

 Score =  119 bits (298), Expect = 3e-24
 Identities = 75/194 (38%), Positives = 102/194 (52%), Gaps = 3/194 (1%)
 Frame = -2

Query: 575 RKRAHKW*KQQANKKEL--RSRPSKFIHVSMSSHIDTQSEMDVDDYFQPLTAGVNMAEPA 402
           R  AH+  K+  + KE   RSR  +  H   +S     + +   D      + V  A   
Sbjct: 134 RMTAHESEKRTTHSKEAIRRSRKLRDRHCESASRASDPAPVAHAD---EADSQVPPARRT 190

Query: 401 NMHNNVR-HYLGKMDVECSFFCKALHWKDERLANTSVKRPFFGMCFKQGKVXXXXXXXXX 225
            +  +V+ H LG+MDVECS  C ALHW DERL+ ++   P FG C   G+V         
Sbjct: 191 YVERSVQLHTLGRMDVECSI-CGALHWLDERLSKSTATSPRFGFCCDSGRVLLPALPPPP 249

Query: 224 PAIQDLYDGSDAKARSFRQHLRQYNLANAFTSLGCQPDDQIFSGSGLIPFTVHGELRHQI 45
           P ++ L  G+D+ AR FR H+RQYN A +F SLG +  + I  G G   F +HGEL H +
Sbjct: 250 PLLRQLLSGNDSAAREFRTHIRQYNAALSFVSLGVRVQESINDGRGPYVFRIHGELHHLM 309

Query: 44  GSLLPEPEKDPTYA 3
           GSLLP P   P+YA
Sbjct: 310 GSLLPVPGVTPSYA 323


Top