BLASTX nr result

ID: Coptis25_contig00021661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021661
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vi...   208   7e-52
emb|CBI17857.3| unnamed protein product [Vitis vinifera]              208   7e-52
ref|XP_002324461.1| predicted protein [Populus trichocarpa] gi|2...   204   7e-51
gb|ABK93411.1| unknown [Populus trichocarpa]                          204   7e-51
ref|XP_002329670.1| predicted protein [Populus trichocarpa] gi|2...   196   3e-48

>ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vitis vinifera]
          Length = 1002

 Score =  208 bits (529), Expect = 7e-52
 Identities = 121/195 (62%), Positives = 131/195 (67%), Gaps = 1/195 (0%)
 Frame = -3

Query: 598  SQRSRSMSFSPDRVRVRGRSPAFNALAATFEXXXXXXXXXXXPVVRKLYPKSATPDSAKL 419
            SQRSRSMSFSPDRVRVRGRSPAFNALAA FE           P+VRKLYPKS TPDS+KL
Sbjct: 808  SQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNSRNLSTPPPMVRKLYPKSVTPDSSKL 867

Query: 418  ASRSATISALMAGFEQPTPENNVPRPLKGRPXXXXXXXXXXXXXXXXXXXSRIEALTI-Q 242
             SRSA I+AL A FEQP  E  VP+  K                      SRIEALTI +
Sbjct: 868  DSRSAAIAALSASFEQPAREPVVPKTPKVTEEAPKPKPKPETNSKEKAMSSRIEALTIEE 927

Query: 241  XXXXXXXXXXXGLPTYPYERLKTTSTDPVTEIEVTKREIYLSSGEFREKLGMTKDAFYKV 62
                       GLP YPYERLKTTS +PV EI+VTKRE YLSS EFR+K GMTKDAFYK+
Sbjct: 928  DVKEGEAEDEEGLPIYPYERLKTTSIEPVAEIDVTKRETYLSSEEFRQKFGMTKDAFYKL 987

Query: 61   PKWKQN*MKMALQLF 17
            PKWKQN +KMALQLF
Sbjct: 988  PKWKQNKLKMALQLF 1002


>emb|CBI17857.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  208 bits (529), Expect = 7e-52
 Identities = 121/195 (62%), Positives = 131/195 (67%), Gaps = 1/195 (0%)
 Frame = -3

Query: 598  SQRSRSMSFSPDRVRVRGRSPAFNALAATFEXXXXXXXXXXXPVVRKLYPKSATPDSAKL 419
            SQRSRSMSFSPDRVRVRGRSPAFNALAA FE           P+VRKLYPKS TPDS+KL
Sbjct: 767  SQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNSRNLSTPPPMVRKLYPKSVTPDSSKL 826

Query: 418  ASRSATISALMAGFEQPTPENNVPRPLKGRPXXXXXXXXXXXXXXXXXXXSRIEALTI-Q 242
             SRSA I+AL A FEQP  E  VP+  K                      SRIEALTI +
Sbjct: 827  DSRSAAIAALSASFEQPAREPVVPKTPKVTEEAPKPKPKPETNSKEKAMSSRIEALTIEE 886

Query: 241  XXXXXXXXXXXGLPTYPYERLKTTSTDPVTEIEVTKREIYLSSGEFREKLGMTKDAFYKV 62
                       GLP YPYERLKTTS +PV EI+VTKRE YLSS EFR+K GMTKDAFYK+
Sbjct: 887  DVKEGEAEDEEGLPIYPYERLKTTSIEPVAEIDVTKRETYLSSEEFRQKFGMTKDAFYKL 946

Query: 61   PKWKQN*MKMALQLF 17
            PKWKQN +KMALQLF
Sbjct: 947  PKWKQNKLKMALQLF 961


>ref|XP_002324461.1| predicted protein [Populus trichocarpa] gi|222865895|gb|EEF03026.1|
            predicted protein [Populus trichocarpa]
          Length = 961

 Score =  204 bits (520), Expect = 7e-51
 Identities = 117/195 (60%), Positives = 127/195 (65%), Gaps = 1/195 (0%)
 Frame = -3

Query: 598  SQRSRSMSFSPDRVRVRGRSPAFNALAATFEXXXXXXXXXXXPVVRKLYPKSATPDSAKL 419
            SQRSRSMSFSPDRVRVRGRSPAFNALAA FE           PVVRK+YPKS +PDSAKL
Sbjct: 767  SQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPVVRKVYPKSVSPDSAKL 826

Query: 418  ASRSATISALMAGFEQPTPENNVPRPLKGRPXXXXXXXXXXXXXXXXXXXSRIEALTIQ- 242
            AS+SA I+AL A FEQP P   V  P   +                     RIE+LTIQ 
Sbjct: 827  ASKSAAIAALTASFEQPPPARQVIMPRSVKVSPETPKSTPESNSKEKPISIRIESLTIQE 886

Query: 241  XXXXXXXXXXXGLPTYPYERLKTTSTDPVTEIEVTKREIYLSSGEFREKLGMTKDAFYKV 62
                       GLP YPYE LK  S DPVTEI+VTKRE YLS+ EFREK GM KDAFYK+
Sbjct: 887  DVKEGEAEDEEGLPIYPYEGLKVNSPDPVTEIDVTKRETYLSAAEFREKFGMAKDAFYKL 946

Query: 61   PKWKQN*MKMALQLF 17
            PKWKQN +KMALQLF
Sbjct: 947  PKWKQNKLKMALQLF 961


>gb|ABK93411.1| unknown [Populus trichocarpa]
          Length = 376

 Score =  204 bits (520), Expect = 7e-51
 Identities = 117/195 (60%), Positives = 127/195 (65%), Gaps = 1/195 (0%)
 Frame = -3

Query: 598 SQRSRSMSFSPDRVRVRGRSPAFNALAATFEXXXXXXXXXXXPVVRKLYPKSATPDSAKL 419
           SQRSRSMSFSPDRVRVRGRSPAFNALAA FE           PVVRK+YPKS +PDSAKL
Sbjct: 182 SQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPVVRKVYPKSVSPDSAKL 241

Query: 418 ASRSATISALMAGFEQPTPENNVPRPLKGRPXXXXXXXXXXXXXXXXXXXSRIEALTIQ- 242
           AS+SA I+AL A FEQP P   V  P   +                     RIE+LTIQ 
Sbjct: 242 ASKSAAIAALTASFEQPPPARQVIMPRSVKVSPETPKSTPESNSKEKPISIRIESLTIQE 301

Query: 241 XXXXXXXXXXXGLPTYPYERLKTTSTDPVTEIEVTKREIYLSSGEFREKLGMTKDAFYKV 62
                      GLP YPYE LK  S DPVTEI+VTKRE YLS+ EFREK GM KDAFYK+
Sbjct: 302 DVKEGEAEDEEGLPIYPYEGLKVNSPDPVTEIDVTKRETYLSAAEFREKFGMAKDAFYKL 361

Query: 61  PKWKQN*MKMALQLF 17
           PKWKQN +KMALQLF
Sbjct: 362 PKWKQNKLKMALQLF 376


>ref|XP_002329670.1| predicted protein [Populus trichocarpa] gi|222870551|gb|EEF07682.1|
            predicted protein [Populus trichocarpa]
          Length = 977

 Score =  196 bits (498), Expect = 3e-48
 Identities = 114/195 (58%), Positives = 126/195 (64%), Gaps = 1/195 (0%)
 Frame = -3

Query: 598  SQRSRSMSFSPDRVRVRGRSPAFNALAATFEXXXXXXXXXXXPVVRKLYPKSATPDSAKL 419
            SQRSRSMSFSPDRVRVRGRSPAF+ALAA FE           PVVRK+YPKS +PDSAKL
Sbjct: 783  SQRSRSMSFSPDRVRVRGRSPAFSALAANFESPSARNLSTPPPVVRKVYPKSVSPDSAKL 842

Query: 418  ASRSATISALMAGFEQPTPENNVPRPLKGRPXXXXXXXXXXXXXXXXXXXSRIEALTIQ- 242
            AS S+ I+AL A FEQP P   V  P   +                    SRIE+LTIQ 
Sbjct: 843  ASNSSAIAALTASFEQPPPARQVIMPRSVKASPEAPKLTPESNSKENSMSSRIESLTIQE 902

Query: 241  XXXXXXXXXXXGLPTYPYERLKTTSTDPVTEIEVTKREIYLSSGEFREKLGMTKDAFYKV 62
                       GLP YPYE LK  S+DP TEI+VTKRE YLS+ EFREK GM K AFYK+
Sbjct: 903  DVKEDEAEDEEGLPIYPYESLKVNSSDPATEIDVTKRETYLSAVEFREKFGMAKYAFYKL 962

Query: 61   PKWKQN*MKMALQLF 17
            PKWKQN +KMALQLF
Sbjct: 963  PKWKQNKLKMALQLF 977


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