BLASTX nr result

ID: Coptis25_contig00021658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021658
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327157.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002301174.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002284845.1| PREDICTED: uncharacterized protein LOC100254...   158   6e-37
ref|XP_002510197.1| conserved hypothetical protein [Ricinus comm...   152   2e-35
emb|CBI19503.3| unnamed protein product [Vitis vinifera]              152   4e-35

>ref|XP_002327157.1| predicted protein [Populus trichocarpa] gi|222835472|gb|EEE73907.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score =  162 bits (410), Expect = 3e-38
 Identities = 88/159 (55%), Positives = 91/159 (57%)
 Frame = +3

Query: 69  MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 248
           MHAKTDSEVTSLAPSSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 249 XXXXXXXXXXXXXXXXXXXXXXXXXKILPNDGSRGNRKGQKPWKECDVIXXXXXXXXXXR 428
                                    KI PND SRG RKGQK WKECDVI          R
Sbjct: 61  HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGGRKGQKQWKECDVIEEEGLLDDEER 120

Query: 429 HSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKI 545
             G PR+CYF A              IL+GAS+ QKPKI
Sbjct: 121 RKGLPRKCYFLAFVLGFFILFSFFSLILWGASKQQKPKI 159


>ref|XP_002301174.1| predicted protein [Populus trichocarpa] gi|222842900|gb|EEE80447.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  160 bits (405), Expect = 1e-37
 Identities = 89/160 (55%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
 Frame = +3

Query: 69  MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 248
           MHAKTDSEVTSLAPSSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 249 XXXXXXXXXXXXXXXXXXXXXXXXXKILPNDGSRGNR-KGQKPWKECDVIXXXXXXXXXX 425
                                    KI PND SRG + KGQK WKECDVI          
Sbjct: 61  HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQGKGQKQWKECDVIEEEGLLEDEE 120

Query: 426 RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKI 545
           R  G PRRCYF A              IL+GAS+PQKPKI
Sbjct: 121 RRKGLPRRCYFLAFVLGFFILFSLFSLILWGASKPQKPKI 160


>ref|XP_002284845.1| PREDICTED: uncharacterized protein LOC100254049 [Vitis vinifera]
          Length = 319

 Score =  158 bits (399), Expect = 6e-37
 Identities = 88/160 (55%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
 Frame = +3

Query: 69  MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 248
           MHAKTDSEVTSLA SSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1   MHAKTDSEVTSLAASSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 249 XXXXXXXXXXXXXXXXXXXXXXXXXKILPNDGSR-GNRKGQKPWKECDVIXXXXXXXXXX 425
                                    KI PND SR G+RKG+KPWKEC VI          
Sbjct: 61  HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGGHRKGEKPWKECAVIEEEGLLEDEE 120

Query: 426 RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKI 545
           R  G PRRCYF A              IL+GAS+PQKPKI
Sbjct: 121 RQKGLPRRCYFLAFVVGFFVLFSLFSLILWGASKPQKPKI 160


>ref|XP_002510197.1| conserved hypothetical protein [Ricinus communis]
           gi|223550898|gb|EEF52384.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 319

 Score =  152 bits (385), Expect = 2e-35
 Identities = 84/160 (52%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
 Frame = +3

Query: 69  MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 248
           MHAKTDSEVTSLAPSSPTRSPRR VY+VQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYFVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 249 XXXXXXXXXXXXXXXXXXXXXXXXXKILPNDGSR-GNRKGQKPWKECDVIXXXXXXXXXX 425
                                    KI PND S+  +RKGQK WK+C VI          
Sbjct: 61  HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASKSSHRKGQKQWKDCAVIEEEGLLEDEA 120

Query: 426 RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKI 545
           R  G PRRCYF A              +L+GAS+PQKPKI
Sbjct: 121 REKGLPRRCYFLAFLLGFFVLFSFFSLVLWGASKPQKPKI 160


>emb|CBI19503.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  152 bits (383), Expect = 4e-35
 Identities = 87/160 (54%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
 Frame = +3

Query: 69  MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 248
           MHAKTDSEVTSLA SSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1   MHAKTDSEVTSLAASSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVL--------- 51

Query: 249 XXXXXXXXXXXXXXXXXXXXXXXXXKILPNDGSR-GNRKGQKPWKECDVIXXXXXXXXXX 425
                                     I PND SR G+RKG+KPWKEC VI          
Sbjct: 52  --------------SPMGSPPHSHSSISPNDASRGGHRKGEKPWKECAVIEEEGLLEDEE 97

Query: 426 RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKI 545
           R  G PRRCYF A              IL+GAS+PQKPKI
Sbjct: 98  RQKGLPRRCYFLAFVVGFFVLFSLFSLILWGASKPQKPKI 137


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