BLASTX nr result
ID: Coptis25_contig00021653
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021653 (781 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI38165.3| unnamed protein product [Vitis vinifera] 314 2e-83 ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi... 314 2e-83 ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|2... 313 3e-83 ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ... 307 2e-81 ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi... 300 2e-79 >emb|CBI38165.3| unnamed protein product [Vitis vinifera] Length = 654 Score = 314 bits (804), Expect = 2e-83 Identities = 146/213 (68%), Positives = 177/213 (83%) Frame = -2 Query: 780 QNGKGSEALALFSRMLRSGERPDHVTMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSK 601 QNG G+EAL +F +ML GE+PDHVTMIGVL ACSHAG+VEEG+ YF+SM +EHGL+P K Sbjct: 435 QNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLK 493 Query: 600 DHYTCMVDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLLE 421 DHYTCMVDLLGRAGC+ EAK IE+MP+ D V+WGSLLA+CKVHGN+EMG H AEKLLE Sbjct: 494 DHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLE 553 Query: 420 LDPSNSGPYVLLSNMYAELKQWGEVARVRTLMRRRGVVKQPGRSWIEINNQVHVFMVKDK 241 +DP NSGPYVLLSNMYAEL +WG+V RVR LMR++GV KQPG SWIE+ ++VHVF+VKDK Sbjct: 554 IDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDK 613 Query: 240 THPQRKEVYKLLNILAAQMKRTRYVLDVGHPES 142 +HP RK++Y +L +L QMKR Y+ D E+ Sbjct: 614 SHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEA 646 >ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Vitis vinifera] Length = 684 Score = 314 bits (804), Expect = 2e-83 Identities = 146/213 (68%), Positives = 177/213 (83%) Frame = -2 Query: 780 QNGKGSEALALFSRMLRSGERPDHVTMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSK 601 QNG G+EAL +F +ML GE+PDHVTMIGVL ACSHAG+VEEG+ YF+SM +EHGL+P K Sbjct: 465 QNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLK 523 Query: 600 DHYTCMVDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLLE 421 DHYTCMVDLLGRAGC+ EAK IE+MP+ D V+WGSLLA+CKVHGN+EMG H AEKLLE Sbjct: 524 DHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLE 583 Query: 420 LDPSNSGPYVLLSNMYAELKQWGEVARVRTLMRRRGVVKQPGRSWIEINNQVHVFMVKDK 241 +DP NSGPYVLLSNMYAEL +WG+V RVR LMR++GV KQPG SWIE+ ++VHVF+VKDK Sbjct: 584 IDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDK 643 Query: 240 THPQRKEVYKLLNILAAQMKRTRYVLDVGHPES 142 +HP RK++Y +L +L QMKR Y+ D E+ Sbjct: 644 SHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEA 676 >ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa] Length = 710 Score = 313 bits (802), Expect = 3e-83 Identities = 145/223 (65%), Positives = 180/223 (80%) Frame = -2 Query: 780 QNGKGSEALALFSRMLRSGERPDHVTMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSK 601 QNG G EAL LF +ML SGE+PDHVTMIG L ACSHAG+VEEG+RYF+SMT+EHGL+P K Sbjct: 474 QNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVK 533 Query: 600 DHYTCMVDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLLE 421 DHYTCMVDLLGRAGC+ EAK IESMP + D V+W SLL++CKVH N+ +G +VAEK+ E Sbjct: 534 DHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFE 593 Query: 420 LDPSNSGPYVLLSNMYAELKQWGEVARVRTLMRRRGVVKQPGRSWIEINNQVHVFMVKDK 241 +DP++SGPYVLL+NMY+EL +WG+ VR LMRRRGVVKQPG SWI+I + VHVFMVKDK Sbjct: 594 IDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDK 653 Query: 240 THPQRKEVYKLLNILAAQMKRTRYVLDVGHPESKTYKEPMEMD 112 HPQ+KE+Y +L +L M++ YV D E+ Y+EP E++ Sbjct: 654 RHPQKKEIYSILKLLTKHMRQAGYVPDASDHEA--YEEPSELE 694 >ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 705 Score = 307 bits (786), Expect = 2e-81 Identities = 147/224 (65%), Positives = 178/224 (79%) Frame = -2 Query: 780 QNGKGSEALALFSRMLRSGERPDHVTMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSK 601 QNG G+EAL +F ML SGERPDHVTMIGVLSACSHAG+VEEG+ YF SMT EHGLVP K Sbjct: 469 QNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVK 528 Query: 600 DHYTCMVDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLLE 421 DHYTCMVDLLGRAGC+ EA I++MPME D V+WGSLLA+CKVHGN+ +G +VAE+LLE Sbjct: 529 DHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLE 588 Query: 420 LDPSNSGPYVLLSNMYAELKQWGEVARVRTLMRRRGVVKQPGRSWIEINNQVHVFMVKDK 241 +DP NSGPYVLLSNMYAEL +W +V RVR MR+ GV+KQPG SWI I + +HVFMVKDK Sbjct: 589 IDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDK 648 Query: 240 THPQRKEVYKLLNILAAQMKRTRYVLDVGHPESKTYKEPMEMDI 109 HP +K++Y +L IL QMKR YV + + + Y+E + ++ Sbjct: 649 RHPHKKDIYLILKILTEQMKRVGYVPEA--DDDEPYEEESDSEL 690 >ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Glycine max] Length = 705 Score = 300 bits (768), Expect = 2e-79 Identities = 148/243 (60%), Positives = 183/243 (75%) Frame = -2 Query: 780 QNGKGSEALALFSRMLRSGERPDHVTMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSK 601 QNG G+ AL +F +ML SG++PDHVTMIGVLSACSHAG+VEEG+RYF+SM E GL P K Sbjct: 469 QNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMK 528 Query: 600 DHYTCMVDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLLE 421 DH+TCMVDLLGRAGC+ EA I++MPM+ D V+WGSLLA+CKVHGN+E+G +VAEKL+E Sbjct: 529 DHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLME 588 Query: 420 LDPSNSGPYVLLSNMYAELKQWGEVARVRTLMRRRGVVKQPGRSWIEINNQVHVFMVKDK 241 +DP NSGPYVLLSNMYAEL +W +V RVR MR+RGV+KQPG SWIEI ++VHVFMVKDK Sbjct: 589 IDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDK 648 Query: 240 THPQRKEVYKLLNILAAQMKRTRYVLDVGHPESKTYKEPMEMDIREGCIAE*FSQMVVQF 61 HP +K+++ +L L QMK YV E D E C E S++V+ F Sbjct: 649 RHPLKKDIHLVLKFLTEQMKWAGYV--------------PEADDDEICEEESDSELVLHF 694 Query: 60 ETD 52 E + Sbjct: 695 EME 697