BLASTX nr result
ID: Coptis25_contig00021645
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00021645
(1368 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19268.3| unnamed protein product [Vitis vinifera] 65 1e-18
ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF... 65 1e-18
ref|XP_003518261.1| PREDICTED: chromosome-associated kinesin KIF... 67 6e-18
ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putativ... 67 3e-17
ref|XP_003544246.1| PREDICTED: chromosome-associated kinesin KIF... 67 4e-17
>emb|CBI19268.3| unnamed protein product [Vitis vinifera]
Length = 1279
Score = 65.1 bits (157), Expect(2) = 1e-18
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -1
Query: 1221 LVDALFHGYNATGLAYVQTGYGKTYTMGTNYTGE 1120
L+DALFHGYNAT LAY QTG GKTYTMGTNYTGE
Sbjct: 92 LLDALFHGYNATVLAYGQTGSGKTYTMGTNYTGE 125
Score = 55.5 bits (132), Expect(2) = 1e-18
Identities = 45/130 (34%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Frame = -2
Query: 1124 ERHSGGIIPKVMETIFLKIGDMKDNVGFLIKMTFIEVNHLHFLFIAS*FNI*NITFEAXX 945
E SGGIIPKVME+IF ++ MKD+ FLI+++FIE+ F F++ + A
Sbjct: 125 EESSGGIIPKVMESIFSRVEAMKDSTEFLIRVSFIEI------FKEEVFDLLDPNSSATS 178
Query: 944 XXXXXXXXXXXXXXXXXXXXXXXXXXLEVSATKVAAPVRNPIQIRET------------- 804
V TK P R PIQIRET
Sbjct: 179 KVEG------------------------VCVTKPTGPARVPIQIRETVSGGITLAGVTEA 214
Query: 803 EVRTKEDMAA 774
EVRTKE+MA+
Sbjct: 215 EVRTKEEMAS 224
>ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera]
Length = 1261
Score = 65.1 bits (157), Expect(2) = 1e-18
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -1
Query: 1221 LVDALFHGYNATGLAYVQTGYGKTYTMGTNYTGE 1120
L+DALFHGYNAT LAY QTG GKTYTMGTNYTGE
Sbjct: 71 LLDALFHGYNATVLAYGQTGSGKTYTMGTNYTGE 104
Score = 55.5 bits (132), Expect(2) = 1e-18
Identities = 45/130 (34%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Frame = -2
Query: 1124 ERHSGGIIPKVMETIFLKIGDMKDNVGFLIKMTFIEVNHLHFLFIAS*FNI*NITFEAXX 945
E SGGIIPKVME+IF ++ MKD+ FLI+++FIE+ F F++ + A
Sbjct: 104 EESSGGIIPKVMESIFSRVEAMKDSTEFLIRVSFIEI------FKEEVFDLLDPNSSATS 157
Query: 944 XXXXXXXXXXXXXXXXXXXXXXXXXXLEVSATKVAAPVRNPIQIRET------------- 804
V TK P R PIQIRET
Sbjct: 158 KVEG------------------------VCVTKPTGPARVPIQIRETVSGGITLAGVTEA 193
Query: 803 EVRTKEDMAA 774
EVRTKE+MA+
Sbjct: 194 EVRTKEEMAS 203
>ref|XP_003518261.1| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max]
Length = 1299
Score = 67.4 bits (163), Expect(2) = 6e-18
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -1
Query: 1227 ASLVDALFHGYNATGLAYVQTGYGKTYTMGTNYTGE 1120
A LVDALFHGYNAT LAY QTG GKTYTMGTNYTGE
Sbjct: 69 APLVDALFHGYNATVLAYGQTGSGKTYTMGTNYTGE 104
Score = 50.8 bits (120), Expect(2) = 6e-18
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Frame = -2
Query: 1124 ERHSGGIIPKVMETIFLKIGDMKDNVGFLIKMTFIEVNHLHFLFIAS*FNI*NITFEAXX 945
E ++GGIIPKVMETIF ++ MK++ FLI+++FIE+ F F++
Sbjct: 104 EDNAGGIIPKVMETIFKRVQTMKESSEFLIRVSFIEI------FKEEVFDL--------- 148
Query: 944 XXXXXXXXXXXXXXXXXXXXXXXXXXLEVSATKVAAPVRNPIQIRET------------- 804
S K AAP R PIQIRET
Sbjct: 149 ------------------LDPNSARGDMASTAKPAAPSRVPIQIRETVNGGITLAGVTEA 190
Query: 803 EVRTKEDMAA 774
EV+TKE+M++
Sbjct: 191 EVKTKEEMSS 200
>ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
gi|223547129|gb|EEF48626.1| Chromosome-associated kinesin
KIF4A, putative [Ricinus communis]
Length = 1290
Score = 66.6 bits (161), Expect(2) = 3e-17
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = -1
Query: 1227 ASLVDALFHGYNATGLAYVQTGYGKTYTMGTNYTGE 1120
A LVDA+FHGYNAT LAY QTG GKTYTMGTNYTGE
Sbjct: 73 APLVDAIFHGYNATVLAYGQTGSGKTYTMGTNYTGE 108
Score = 49.3 bits (116), Expect(2) = 3e-17
Identities = 42/125 (33%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Frame = -2
Query: 1109 GIIPKVMETIFLKIGDMKDNVGFLIKMTFIEVNHLHFLFIAS*FNI*NITFEAXXXXXXX 930
GIIPKVMETIF ++ MKD+ FLI+++FIE+ F F++ + A
Sbjct: 113 GIIPKVMETIFQRVETMKDSTEFLIRVSFIEI------FKEEVFDLLDSNLGASSKGEGA 166
Query: 929 XXXXXXXXXXXXXXXXXXXXXLEVSATKVAAPVRNPIQIRET-------------EVRTK 789
A A P R PIQIRET EVRTK
Sbjct: 167 VYI----------------------AKPAALPTRVPIQIRETVNGGITLAGVTEAEVRTK 204
Query: 788 EDMAA 774
E+MA+
Sbjct: 205 EEMAS 209
>ref|XP_003544246.1| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max]
Length = 1317
Score = 67.4 bits (163), Expect(2) = 4e-17
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -1
Query: 1227 ASLVDALFHGYNATGLAYVQTGYGKTYTMGTNYTGE 1120
A LVDALFHGYNAT LAY QTG GKTYTMGTNYTGE
Sbjct: 94 APLVDALFHGYNATVLAYGQTGSGKTYTMGTNYTGE 129
Score = 48.1 bits (113), Expect(2) = 4e-17
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Frame = -2
Query: 1124 ERHSGGIIPKVMETIFLKIGDMKDNVGFLIKMTFIEVNHLHFLFIAS*FNI*NITFEAXX 945
E ++GGIIPKVMETIF ++ MK++ FLI+++FIE+ F F++
Sbjct: 129 EDNAGGIIPKVMETIFKRVQTMKESSEFLIRVSFIEI------FKEEVFDL--------- 173
Query: 944 XXXXXXXXXXXXXXXXXXXXXXXXXXLEVSAT-KVAAPVRNPIQIRET------------ 804
+V+ T K A P R PIQIRET
Sbjct: 174 -------------------LDHNSSRGDVAPTAKPAVPSRVPIQIRETVNGGITLAGVTE 214
Query: 803 -EVRTKEDMAA 774
EV+TKE+M++
Sbjct: 215 AEVKTKEEMSS 225