BLASTX nr result
ID: Coptis25_contig00021643
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00021643
(1256 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi... 187 6e-45
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm... 174 3e-41
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2... 160 8e-37
gb|ABK92768.1| unknown [Populus trichocarpa] 160 8e-37
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc... 157 7e-36
>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
gi|296088512|emb|CBI37503.3| unnamed protein product
[Vitis vinifera]
Length = 378
Score = 187 bits (474), Expect = 6e-45
Identities = 121/348 (34%), Positives = 185/348 (53%), Gaps = 13/348 (3%)
Frame = -3
Query: 1218 SGFFFQDTW-----DVPYPVKYFSVKNDQAILQDTVLDFLPEMVELIASSNGLLCCKSCD 1054
+GFFFQ+ + D+ + Y + +Q T+ FLPE V ++ S NGL+CC+S
Sbjct: 50 AGFFFQERYQWCDEDIS-TISYIPATMEGTQVQQTIFSFLPEDVVILGSCNGLVCCRSVF 108
Query: 1053 DSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAFDPFCYPVDELSNFKLACVCKET 874
S D I+VCNP K+++++ + LAF+PF P+D +NFK+ V +
Sbjct: 109 PSP--DPSIFVCNPSNKQWIRL-LETTPDKESSYGLAFNPFQSPIDMPTNFKVVRVSQAQ 165
Query: 873 L-----LTILLQVYSSKTKEWSKLELRVCGDNYNCVPDGQVVFASGMLYWMTYGDVILAF 709
++YSS+ W K + +C N+N + + +F G+L+W+T GD +L+F
Sbjct: 166 TDMDDDSYFSFEIYSSQAGAWKKSK-EICQCNHNLFKN-KGIFVGGILHWLTDGDQVLSF 223
Query: 708 DVVTEEFCFVGLPVERIYRSQGLCEVCIGESNDRLHFIVISEAGFQVWLMDS--EPKWVL 535
++ E + P I+ + + E+CIGES RLH+I+ISE G QVW ++ + W L
Sbjct: 224 NIENELSWLISAPFPTIHLT-AIPEMCIGESRGRLHYIMISEDGLQVWALEDYYDSNWSL 282
Query: 534 KHLISLSEMEEGNPHFLYNDAKRAARLVPDDFVIPTWIEPLVYKDGTLLVKLRCNYSYQN 355
H +L MEE N LYN R A+ + D + W++PL +KDG LL++
Sbjct: 283 VHSTTLEVMEEENSQLLYNTRDRVAQRISIDSI--PWMDPLAFKDGLLLMR--------- 331
Query: 354 EELEVCTKIYLYNFETRTMLELFSIDKLGSQLGF-LRALPYSMSLAPL 214
V TKI LY TR M EL ++ KLG F +PYS++LAPL
Sbjct: 332 ----VSTKIILYCIGTRKMEELCNLSKLGRNSIFGPLVIPYSLNLAPL 375
>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
gi|223535221|gb|EEF36899.1| conserved hypothetical
protein [Ricinus communis]
Length = 375
Score = 174 bits (442), Expect = 3e-41
Identities = 121/343 (35%), Positives = 175/343 (51%), Gaps = 8/343 (2%)
Frame = -3
Query: 1218 SGFFFQDT-----WDVPYPVKYFSVKNDQAILQDTVLDFLPEMVELIASSNGLLCCKSCD 1054
SGFFFQ +D+ + Y VK + L V DFLP+ V L+ + NGL+CC+SC
Sbjct: 56 SGFFFQQRFQWSEYDIE-TINYIPVKWEGLELHKKVFDFLPQDVVLLTTCNGLVCCRSCF 114
Query: 1053 DSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAFDPFCYPVDELSNFKLACVCKET 874
I+VCNP+ KE+V+++W + H ALAFDP +NFKL +
Sbjct: 115 PFEL--PAIFVCNPLNKEWVKLDWTEPDKEH-SIALAFDPLLDISGNSANFKL-----DE 166
Query: 873 LLTILLQVYSSKTKEWSKLELRVCGDNYNCVPDGQVVFASGMLYWMTYGDVILAFDVVTE 694
L +YSS+T W+ L +C N N + + V+ G+L+W+T D IL FDV E
Sbjct: 167 QLYFSFDIYSSRTGSWN-LSKDICWCNSN-LHKNKGVYIRGVLHWLTDEDQILTFDVDNE 224
Query: 693 EFCFVGLPVERIYRSQGLCEVCIGESNDRLHFIVISEAGFQVWLMDS--EPKWVLKHLIS 520
+ PV S + CIGE LH+++ISE GF +W ++ E W+LK+ +
Sbjct: 225 LAFLISAPVPAAEFSTA-PKACIGELEGCLHYVMISEEGFHIWSLEDYFELNWLLKYSKT 283
Query: 519 LSEMEEGNPHFLYNDAKRAARLVPDDFVIPTWIEPLVYKDGTLLVKLRCNYSYQNEELEV 340
L+EME+ +P FL N + + DD + W++ L +KDG L+ L V
Sbjct: 284 LAEMEQEHPKFLLNMQELVKLQMTDD--VSPWVDSLAFKDGILV-------------LRV 328
Query: 339 CTKIYLYNFETRTMLELFSIDKLG-SQLGFLRALPYSMSLAPL 214
T +YLY+ M E+ K G S + LPYSM+L PL
Sbjct: 329 STIVYLYDIIRSKMQEVCDNSKFGTSSMYCPTVLPYSMTLVPL 371
>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
predicted protein [Populus trichocarpa]
Length = 424
Score = 160 bits (404), Expect = 8e-37
Identities = 117/354 (33%), Positives = 180/354 (50%), Gaps = 14/354 (3%)
Frame = -3
Query: 1230 KTVTSGFFFQDTW----DVPYPVKYFSVKNDQAILQDTVLDFLPEMVELIASSNGLLCCK 1063
K SGFFFQ D + YF V+ ++ LQ V FLP+ V ++A NGL+CC+
Sbjct: 51 KEPLSGFFFQQRHRYCPDDIKTITYFPVERNR--LQQDVFAFLPQDVVVLALCNGLVCCR 108
Query: 1062 SCDDSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAFDPFCYPVDELSNFKLA--- 892
SC D IYVCNP+ E+ +++W K ALAF+PF L+NFK+
Sbjct: 109 SC--YPFEDPAIYVCNPLNSEWWKLDW-KEPGKESFIALAFNPFQDISVNLTNFKVVRPR 165
Query: 891 -CVCKETLLTILLQVYSSKTKEWSKLELRVCGDNYNCVPDGQVVFASGMLYWMTYGDVIL 715
++ ++Y+S+T+ W KL VC + N + + +F+ G+L+W+T GD IL
Sbjct: 166 QFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCD-NSLSKNEGIFSGGILHWLTDGDQIL 223
Query: 714 AFDVVTEEFCFVGLPVERIYRSQGLCEVCIGESNDRLHFIVISEAGFQVWLMDS--EPKW 541
F+V E + P+ CIGES +L++++ISE G VW+++ + W
Sbjct: 224 TFNVENELALLISTPLP-AGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTW 282
Query: 540 VLKHLISLSEMEEGNPHF---LYNDAKRAARLVPDDFVIPTWIEPLVYKDGTLLVKLRCN 370
LK+ +L+++E+ + LYN R+ DD W++PL +KDG L+V+
Sbjct: 283 SLKYSKTLAQIEKEHSDIMINLYNRVMLWQRI--DD---RPWMDPLAFKDGVLVVR---- 333
Query: 369 YSYQNEELEVCTKIYLYNFETRTMLELFSIDKLGSQLGFLR-ALPYSMSLAPLG 211
+ IYLY+ +T M E+ K G+ LPY+MSL PLG
Sbjct: 334 ---------ISNTIYLYHVDTSKMEEVGETSKFGAMSWVSPIVLPYTMSLVPLG 378
>gb|ABK92768.1| unknown [Populus trichocarpa]
Length = 384
Score = 160 bits (404), Expect = 8e-37
Identities = 117/354 (33%), Positives = 180/354 (50%), Gaps = 14/354 (3%)
Frame = -3
Query: 1230 KTVTSGFFFQDTW----DVPYPVKYFSVKNDQAILQDTVLDFLPEMVELIASSNGLLCCK 1063
K SGFFFQ D + YF V+ ++ LQ V FLP+ V ++A NGL+CC+
Sbjct: 51 KEPLSGFFFQQRHRYCPDDIKTITYFPVERNR--LQQDVFAFLPQDVVVLALCNGLVCCR 108
Query: 1062 SCDDSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAFDPFCYPVDELSNFKLA--- 892
SC D IYVCNP+ E+ +++W K ALAF+PF L+NFK+
Sbjct: 109 SC--YPFEDPAIYVCNPLNSEWWKLDW-KEPGKESFIALAFNPFQDISVNLTNFKVVRPR 165
Query: 891 -CVCKETLLTILLQVYSSKTKEWSKLELRVCGDNYNCVPDGQVVFASGMLYWMTYGDVIL 715
++ ++Y+S+T+ W KL VC + N + + +F+ G+L+W+T GD IL
Sbjct: 166 QFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCD-NSLSKNEGIFSGGILHWLTDGDQIL 223
Query: 714 AFDVVTEEFCFVGLPVERIYRSQGLCEVCIGESNDRLHFIVISEAGFQVWLMDS--EPKW 541
F+V E + P+ CIGES +L++++ISE G VW+++ + W
Sbjct: 224 TFNVENELALLISTPLP-AGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTW 282
Query: 540 VLKHLISLSEMEEGNPHF---LYNDAKRAARLVPDDFVIPTWIEPLVYKDGTLLVKLRCN 370
LK+ +L+++E+ + LYN R+ DD W++PL +KDG L+V+
Sbjct: 283 SLKYSKTLAQIEKEHSDIMINLYNRVMLWQRI--DD---RPWMDPLAFKDGVLVVR---- 333
Query: 369 YSYQNEELEVCTKIYLYNFETRTMLELFSIDKLGSQLGFLR-ALPYSMSLAPLG 211
+ IYLY+ +T M E+ K G+ LPY+MSL PLG
Sbjct: 334 ---------ISNTIYLYHVDTSKMEEVGETSKFGAMSWVSPIVLPYTMSLVPLG 378
>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
Length = 398
Score = 157 bits (396), Expect = 7e-36
Identities = 114/349 (32%), Positives = 173/349 (49%), Gaps = 14/349 (4%)
Frame = -3
Query: 1218 SGFFFQDTW-DVPYPVKYFSVK--NDQAILQDTVLDFLPEMVELIASSNGLLCCKSC--- 1057
SGF FQ+ + P + F+ + + +Q V FLPE V ++ S NGL+CC+SC
Sbjct: 52 SGFMFQEKYRKCPIDISTFTYMPIDADSKVQKMVFGFLPEDVVILQSCNGLVCCRSCFRT 111
Query: 1056 DDSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAFDPFCYPVDELSNFKLACVCK- 880
S IYVCNP+ K++V E + ALAFDP PV+ +NFK+ + +
Sbjct: 112 QHSTTHSTTIYVCNPLFKKWVSFEVAQLDSF-SSIALAFDPILDPVNTATNFKVVRIQQL 170
Query: 879 ---ETLLTILLQVYSSKTKEWSKLELRVCGDNYNCVPDGQVVFASGMLYWMTYGDVILAF 709
+ + ++YSS+T W K VC + N + + +A G+L+W+T D ILAF
Sbjct: 171 ENEQEEMYYTFEIYSSETGTW-KESSEVCYSDGNLL-NNNGTYAKGVLHWLTDTDQILAF 228
Query: 708 DVVTEEFCFVGLPVERIYRSQGLCEVCIGESNDRLHFIVISEAGFQVWLMDS--EPKWVL 535
D E V P+ + CIGES LHFI+I E G VW +D E KW L
Sbjct: 229 DTEKELSLLVPSPIPALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLDDYFEAKWTL 288
Query: 534 KHLISLSEMEEGNPHFLYNDAK-RAARLVPDDFVIPTWIEPLVYKDGTLLVKLRCNYSYQ 358
KH L +E+ NP+ + K R +P + +++P +KD LL++
Sbjct: 289 KHSKQLQMIEDENPNMFFKLYKIMQRRRLPG---MEPYMDPWAFKDEVLLMR-------- 337
Query: 357 NEELEVCTKIYLYNFETRTMLELFSIDKLG-SQLGFLRALPYSMSLAPL 214
V + +Y Y+ ET ++E+ ++ LG + +PYS+SL PL
Sbjct: 338 -----VFSTVYFYHIETGKVVEVCNVASLGPNPFVSPPVIPYSLSLIPL 381