BLASTX nr result

ID: Coptis25_contig00021642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021642
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32,...   347   2e-93
emb|CAN65621.1| hypothetical protein VITISV_040853 [Vitis vinifera]   340   3e-91
ref|XP_002509816.1| short-chain dehydrogenase, putative [Ricinus...   337   2e-90
ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32,...   336   3e-90
ref|NP_849428.1| Rossmann-fold NAD(P)-binding domain-containing ...   335   8e-90

>ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|302143828|emb|CBI22689.3| unnamed protein
           product [Vitis vinifera]
          Length = 313

 Score =  347 bits (890), Expect = 2e-93
 Identities = 177/222 (79%), Positives = 196/222 (88%)
 Frame = +1

Query: 106 FFFNKKGASGFSSSSTALEVTQGIDGTNFTAIVTGASSGIGAETARVLSLRGVHVVMAVR 285
           ++F++KG SGFS+SSTA EVTQGIDGT  TAIVTGASSGIG ET RVL+LRGVHVVM VR
Sbjct: 2   WWFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGVR 61

Query: 286 NMDAGNKVKEAILKENPGAKVDVMELDLSSMASVNKFASEYTSAGLPLNILINNAGVMAP 465
           NM AG +VKEAI+KE P AKVD MELDLSSMASV KFASEY S+GLPLNILINNAG+MA 
Sbjct: 62  NMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMAV 121

Query: 466 PFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAEKNNIQGRIVNVSSDAHRMTYREGI 645
           P+MLS+DNIEMQFATNH+GHFLLTNLLL+TMK T  K+  +GRIVNVSS AHR  YREGI
Sbjct: 122 PYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPYREGI 181

Query: 646 QFDKINEKSGYSSLYAYGQSKLANVLHANELVRRLKEDGVQI 771
           +FDKIN+KSGYSSL+AYGQSKLANVLHANEL RR KEDGV I
Sbjct: 182 RFDKINDKSGYSSLFAYGQSKLANVLHANELARRFKEDGVDI 223


>emb|CAN65621.1| hypothetical protein VITISV_040853 [Vitis vinifera]
          Length = 231

 Score =  340 bits (871), Expect = 3e-91
 Identities = 174/214 (81%), Positives = 190/214 (88%)
 Frame = +1

Query: 112 FNKKGASGFSSSSTALEVTQGIDGTNFTAIVTGASSGIGAETARVLSLRGVHVVMAVRNM 291
           F++KGASGFSSSSTA EVTQGIDGT  TAIVTGASSGIG ET RVL+LRGVHVVM VRNM
Sbjct: 4   FSRKGASGFSSSSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGVRNM 63

Query: 292 DAGNKVKEAILKENPGAKVDVMELDLSSMASVNKFASEYTSAGLPLNILINNAGVMAPPF 471
            AG +VKEAI+KE P AKVD MELDLSSMASV KFASEY S+GLPLNILINNAG+MA P+
Sbjct: 64  SAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMAVPY 123

Query: 472 MLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAEKNNIQGRIVNVSSDAHRMTYREGIQF 651
           MLS+DNIEMQFATNH+GHFLLTNLLL+TMK T  K+  +GRIVNVSS AHR  YREGI+F
Sbjct: 124 MLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPYREGIRF 183

Query: 652 DKINEKSGYSSLYAYGQSKLANVLHANELVRRLK 753
           DKIN+KSGYSSL+AYGQSKLANVLHANEL RR K
Sbjct: 184 DKINDKSGYSSLFAYGQSKLANVLHANELARRFK 217


>ref|XP_002509816.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223549715|gb|EEF51203.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 315

 Score =  337 bits (864), Expect = 2e-90
 Identities = 170/222 (76%), Positives = 195/222 (87%)
 Frame = +1

Query: 106 FFFNKKGASGFSSSSTALEVTQGIDGTNFTAIVTGASSGIGAETARVLSLRGVHVVMAVR 285
           + F  KG SGFS++STA +VTQGIDGT  TAIVTGASSGIG ETARVL+LR VHVVMAVR
Sbjct: 2   WIFGWKGPSGFSANSTAEQVTQGIDGTGLTAIVTGASSGIGVETARVLALRDVHVVMAVR 61

Query: 286 NMDAGNKVKEAILKENPGAKVDVMELDLSSMASVNKFASEYTSAGLPLNILINNAGVMAP 465
           N+DAG  VKE+ILKE P AK+DVM+ DLSSMASV KFASEY S+GLPLN+LINNAGVMA 
Sbjct: 62  NVDAGRNVKESILKEIPTAKIDVMQFDLSSMASVRKFASEYISSGLPLNLLINNAGVMAT 121

Query: 466 PFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAEKNNIQGRIVNVSSDAHRMTYREGI 645
           PFMLSQDNIE QFATNH+GHFLLT+LLLETMKNTA +++ +GRIVNVSS  HR TYREGI
Sbjct: 122 PFMLSQDNIERQFATNHVGHFLLTDLLLETMKNTARESSREGRIVNVSSAGHRFTYREGI 181

Query: 646 QFDKINEKSGYSSLYAYGQSKLANVLHANELVRRLKEDGVQI 771
           +FDK+N+++GY+S+ AYGQSKLAN+LHA EL RRLKEDGV I
Sbjct: 182 RFDKLNDEAGYNSILAYGQSKLANILHAGELARRLKEDGVDI 223


>ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like
           [Vitis vinifera] gi|147792549|emb|CAN65620.1|
           hypothetical protein VITISV_040852 [Vitis vinifera]
           gi|302143827|emb|CBI22688.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  336 bits (862), Expect = 3e-90
 Identities = 171/222 (77%), Positives = 195/222 (87%)
 Frame = +1

Query: 106 FFFNKKGASGFSSSSTALEVTQGIDGTNFTAIVTGASSGIGAETARVLSLRGVHVVMAVR 285
           ++F + GASGFS+SSTA+EVT GIDGT  TAIVTGASSGIG ETARVL+LRGVHVVMAVR
Sbjct: 2   WWFGRNGASGFSASSTAVEVTHGIDGTGLTAIVTGASSGIGTETARVLALRGVHVVMAVR 61

Query: 286 NMDAGNKVKEAILKENPGAKVDVMELDLSSMASVNKFASEYTSAGLPLNILINNAGVMAP 465
           NM AG +VKEAI KE P AK+D MELDLSSMASV KFASE++S+GLPLN+LINNAG+MA 
Sbjct: 62  NMAAGREVKEAIAKEIPTAKIDAMELDLSSMASVRKFASEFSSSGLPLNLLINNAGLMAT 121

Query: 466 PFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAEKNNIQGRIVNVSSDAHRMTYREGI 645
           PFMLS+DNIE+QFATNHIGHFLLTNLLLETMK TA ++N +GRIVNVSS  HR +Y EGI
Sbjct: 122 PFMLSKDNIELQFATNHIGHFLLTNLLLETMKKTARESNKEGRIVNVSSRRHRFSYHEGI 181

Query: 646 QFDKINEKSGYSSLYAYGQSKLANVLHANELVRRLKEDGVQI 771
           +FD IN++SGY+ L AYGQSKLANVLHANEL RRLK+DG  I
Sbjct: 182 RFDMINDQSGYNRLSAYGQSKLANVLHANELSRRLKDDGANI 223


>ref|NP_849428.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana] gi|353678136|sp|A2RVM0.1|TIC32_ARATH RecName:
           Full=Short-chain dehydrogenase TIC 32, chloroplastic;
           AltName: Full=Translocon at the inner envelope membrane
           of chloroplasts 32; Short=AtTIC32
           gi|124300994|gb|ABN04749.1| At4g23430 [Arabidopsis
           thaliana] gi|332659354|gb|AEE84754.1| Rossmann-fold
           NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 322

 Score =  335 bits (858), Expect = 8e-90
 Identities = 168/222 (75%), Positives = 194/222 (87%)
 Frame = +1

Query: 106 FFFNKKGASGFSSSSTALEVTQGIDGTNFTAIVTGASSGIGAETARVLSLRGVHVVMAVR 285
           +FF  KGASGFSS STA EVT G+DGT  TAIVTGASSGIG ETARVLSLRGVHVVMAVR
Sbjct: 2   WFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAVR 61

Query: 286 NMDAGNKVKEAILKENPGAKVDVMELDLSSMASVNKFASEYTSAGLPLNILINNAGVMAP 465
           N D+G KVKE I+K+ PGAK+DVMELDLSSM SV KFASEY S GLPLN+LINNAG+MA 
Sbjct: 62  NTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMAC 121

Query: 466 PFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAEKNNIQGRIVNVSSDAHRMTYREGI 645
           PFMLS+DNIE+QFATNH+GHFLLT LLL+TMK+T+ ++  +GRIVN+SS+AHR +Y EG+
Sbjct: 122 PFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGV 181

Query: 646 QFDKINEKSGYSSLYAYGQSKLANVLHANELVRRLKEDGVQI 771
           +FDKIN+KS YSS+ AYGQSKL NVLHANEL ++LKEDGV I
Sbjct: 182 RFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNI 223


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