BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021641
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protei...    82   1e-25
ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana] g...    82   1e-25
ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arab...    82   1e-25
dbj|BAD94038.1| pseudogene [Arabidopsis thaliana]                      82   1e-25
ref|XP_002531123.1| chromodomain helicase DNA binding protein, p...    81   2e-25

>gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis
           thaliana]
          Length = 1738

 Score = 82.0 bits (201), Expect(2) = 1e-25
 Identities = 43/53 (81%), Positives = 43/53 (81%)
 Frame = -2

Query: 328 YTILKSIMLSSLLNLHTELRPHILRRVIKDVEKSLPPKIERILRVVMSPLQKQ 170
           Y  L S   S L NLH ELRPHILRRVIKDVEKSLPPKIERILRV MSPLQKQ
Sbjct: 835 YKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQ 887



 Score = 59.7 bits (143), Expect(2) = 1e-25
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -1

Query: 86  RYYKWILERNFHDLNKGVHGNQVSLLNI 3
           +YYKWILERNFHDLNKGV GNQVSLLNI
Sbjct: 887 QYYKWILERNFHDLNKGVRGNQVSLLNI 914


>ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana]
           gi|330251136|gb|AEC06230.1| chromatin remodeling 5
           [Arabidopsis thaliana]
          Length = 1724

 Score = 82.0 bits (201), Expect(2) = 1e-25
 Identities = 43/53 (81%), Positives = 43/53 (81%)
 Frame = -2

Query: 328 YTILKSIMLSSLLNLHTELRPHILRRVIKDVEKSLPPKIERILRVVMSPLQKQ 170
           Y  L S   S L NLH ELRPHILRRVIKDVEKSLPPKIERILRV MSPLQKQ
Sbjct: 821 YKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQ 873



 Score = 59.7 bits (143), Expect(2) = 1e-25
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -1

Query: 86  RYYKWILERNFHDLNKGVHGNQVSLLNI 3
           +YYKWILERNFHDLNKGV GNQVSLLNI
Sbjct: 873 QYYKWILERNFHDLNKGVRGNQVSLLNI 900


>ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
           lyrata] gi|297331712|gb|EFH62131.1| hypothetical protein
           ARALYDRAFT_480306 [Arabidopsis lyrata subsp. lyrata]
          Length = 1721

 Score = 82.0 bits (201), Expect(2) = 1e-25
 Identities = 43/53 (81%), Positives = 43/53 (81%)
 Frame = -2

Query: 328 YTILKSIMLSSLLNLHTELRPHILRRVIKDVEKSLPPKIERILRVVMSPLQKQ 170
           Y  L S   S L NLH ELRPHILRRVIKDVEKSLPPKIERILRV MSPLQKQ
Sbjct: 818 YKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQ 870



 Score = 59.7 bits (143), Expect(2) = 1e-25
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -1

Query: 86  RYYKWILERNFHDLNKGVHGNQVSLLNI 3
           +YYKWILERNFHDLNKGV GNQVSLLNI
Sbjct: 870 QYYKWILERNFHDLNKGVRGNQVSLLNI 897


>dbj|BAD94038.1| pseudogene [Arabidopsis thaliana]
          Length = 1221

 Score = 82.0 bits (201), Expect(2) = 1e-25
 Identities = 43/53 (81%), Positives = 43/53 (81%)
 Frame = -2

Query: 328 YTILKSIMLSSLLNLHTELRPHILRRVIKDVEKSLPPKIERILRVVMSPLQKQ 170
           Y  L S   S L NLH ELRPHILRRVIKDVEKSLPPKIERILRV MSPLQKQ
Sbjct: 821 YKNLNSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQ 873



 Score = 59.7 bits (143), Expect(2) = 1e-25
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -1

Query: 86  RYYKWILERNFHDLNKGVHGNQVSLLNI 3
           +YYKWILERNFHDLNKGV GNQVSLLNI
Sbjct: 873 QYYKWILERNFHDLNKGVRGNQVSLLNI 900


>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
           communis] gi|223529287|gb|EEF31257.1| chromodomain
           helicase DNA binding protein, putative [Ricinus
           communis]
          Length = 1718

 Score = 81.3 bits (199), Expect(2) = 2e-25
 Identities = 41/44 (93%), Positives = 41/44 (93%)
 Frame = -2

Query: 301 SSLLNLHTELRPHILRRVIKDVEKSLPPKIERILRVVMSPLQKQ 170
           SSL NLH ELRPHILRRVIKDVEKSLPPKIERILRV MSPLQKQ
Sbjct: 791 SSLANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQ 834



 Score = 59.7 bits (143), Expect(2) = 2e-25
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -1

Query: 86  RYYKWILERNFHDLNKGVHGNQVSLLNI 3
           +YYKWILERNFHDLNKGV GNQVSLLNI
Sbjct: 834 QYYKWILERNFHDLNKGVRGNQVSLLNI 861