BLASTX nr result

ID: Coptis25_contig00021639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021639
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vit...   117   7e-25
emb|CBI21358.3| unnamed protein product [Vitis vinifera]              117   7e-25
ref|XP_002298621.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002509525.1| ATP binding protein, putative [Ricinus commu...   104   8e-21
ref|XP_003524613.1| PREDICTED: fidgetin-like protein 1-like [Gly...    97   1e-18

>ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vitis vinifera]
          Length = 668

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
 Frame = +2

Query: 38  KNHGIPASVQIEDEERHQENSLATKRAHLVISSPKNENMKSPSCIEE--NDASGNGFVTA 211
           K  G  A +++E+EER   N L TKR H+ ISSP N+  KSPS  EE  ND  G GFVTA
Sbjct: 208 KGQGASAFLKVEEEERAHGNGLGTKRGHMEISSPGNDIAKSPSSNEETQNDGFGKGFVTA 267

Query: 212 RTKLEMDARQRRGLAGSPNASGSPQNENNINSRSYGIRSGGF 337
           R KLEMDARQRRG AGSP+AS SPQ++NN  SR YG +S GF
Sbjct: 268 RAKLEMDARQRRGSAGSPSASVSPQSDNNFTSRGYGAKSYGF 309


>emb|CBI21358.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
 Frame = +2

Query: 38  KNHGIPASVQIEDEERHQENSLATKRAHLVISSPKNENMKSPSCIEE--NDASGNGFVTA 211
           K  G  A +++E+EER   N L TKR H+ ISSP N+  KSPS  EE  ND  G GFVTA
Sbjct: 193 KGQGASAFLKVEEEERAHGNGLGTKRGHMEISSPGNDIAKSPSSNEETQNDGFGKGFVTA 252

Query: 212 RTKLEMDARQRRGLAGSPNASGSPQNENNINSRSYGIRSGGF 337
           R KLEMDARQRRG AGSP+AS SPQ++NN  SR YG +S GF
Sbjct: 253 RAKLEMDARQRRGSAGSPSASVSPQSDNNFTSRGYGAKSYGF 294


>ref|XP_002298621.1| predicted protein [Populus trichocarpa] gi|222845879|gb|EEE83426.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/114 (49%), Positives = 81/114 (71%), Gaps = 2/114 (1%)
 Frame = +2

Query: 2   IGNTHTDNQNLHKNHGIPASVQIEDEERHQENSLATKRAHLVISSPKNENMKSPSCIEEN 181
           I   H+ N N  K + + + +++++EER   N++ +KR+H+ ISSP+N++  SP+  EEN
Sbjct: 208 IEKPHSHN-NHPKGYSLSSFIKLQEEERGYGNAVGSKRSHVEISSPRNDSANSPTNNEEN 266

Query: 182 --DASGNGFVTARTKLEMDARQRRGLAGSPNASGSPQNENNINSRSYGIRSGGF 337
             D SGNGFVTAR KLEMDA+Q+ GLAGSP+ S SPQ+++   +R YG RS GF
Sbjct: 267 NTDGSGNGFVTARAKLEMDAKQKHGLAGSPSTSVSPQSDS--TNRGYGARSYGF 318


>ref|XP_002509525.1| ATP binding protein, putative [Ricinus communis]
           gi|223549424|gb|EEF50912.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 660

 Score =  104 bits (259), Expect = 8e-21
 Identities = 57/102 (55%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
 Frame = +2

Query: 38  KNHGIPASVQIEDEERHQENSLATKRAHLVISSPKNENMKSPSCIEE--NDASGNGFVTA 211
           KNHG+   ++ E+EER   ++L +KR+H  I SPK++  KSP+  EE   D SGNGFVTA
Sbjct: 202 KNHGLSTYMKNEEEERGFGSTLGSKRSHEEIRSPKSDIAKSPTNNEEANTDVSGNGFVTA 261

Query: 212 RTKLEMDARQRRGLAGSPNASGSPQNENNINSRSYGIRSGGF 337
           R KLEMDARQ+RGL GSP+AS SPQ ++  ++R+YG RS GF
Sbjct: 262 RAKLEMDARQKRGLMGSPSASVSPQGDS--SNRNYGARSYGF 301


>ref|XP_003524613.1| PREDICTED: fidgetin-like protein 1-like [Glycine max]
          Length = 659

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 6/111 (5%)
 Frame = +2

Query: 20  DNQNLHKNH----GIPASVQIEDEERHQENSLATKRAHLVISSPKNENMKSPSCIEE--N 181
           D    H +H    G  + +Q+E EER   N+ +TKR H+  +SP+   +KSPS  E+   
Sbjct: 189 DRPQSHASHTKGPGFSSILQVEGEERAFGNTFSTKRVHMENNSPRVGFVKSPSSKEDVNP 248

Query: 182 DASGNGFVTARTKLEMDARQRRGLAGSPNASGSPQNENNINSRSYGIRSGG 334
           DA GNGFVTAR KLEM+A+Q+RG+ GSP+AS SPQ +NN  +R YG RS G
Sbjct: 249 DACGNGFVTARAKLEMEAKQKRGVGGSPSASVSPQCDNNSANRLYGGRSYG 299


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