BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021632
         (1589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   142   2e-31
gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thal...   135   3e-29
ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thalian...   135   3e-29
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...   135   4e-29
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...   131   4e-28

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score =  142 bits (358), Expect = 2e-31
 Identities = 111/377 (29%), Positives = 186/377 (49%), Gaps = 17/377 (4%)
 Frame = -3

Query: 1566 LPHEIIIEILSRLPAKTLITFRCVSKPWRSLTYDTNFIKMHLTRALERDDLNLFVTETSL 1387
            LP E+I EIL RLPAK L+  R VSKPW +L    NF+K+HL  +++    NL++   + 
Sbjct: 4    LPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSS-NLYIILRTT 62

Query: 1386 NHKKVELKGVDDDGNEVESRLVSGFECHTHLYCIDGTLFDKLVELRNPLGMTFTNLFGPP 1207
            +H    +  +D + N V +  V+                  L EL +PL M + +     
Sbjct: 63   SH----VHYMDFEQNLVLNDCVT------------------LKELNHPL-MCYNH----- 94

Query: 1206 FDDSKVMGTCNGIVCLAR-RNIVLLLNPTTREFKVVRFGEEFDFDYHQNN-------GFG 1051
                KV+G+ NG++C++   + + + NP+TR+ +VV F       Y           GFG
Sbjct: 95   --GIKVLGSVNGLLCISNVVDDIAVWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFG 152

Query: 1050 YDGSTDDYVLVKFINGNG-----CESSINVYSVNDTLCSTVSDVPYTIADDKALGIFLNG 886
            YD   DDY LV+     G      ES + VYS+       + D+PY +    A G+F NG
Sbjct: 153  YDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANG 212

Query: 885  AFYWLA--YGKGKYSKAIILFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLWGKLCMYC 712
            A +W+     +   +  ++  D+  + +REV +P    K   + +GV    L G LC   
Sbjct: 213  ALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYKDKNFYIDLGV----LRGCLCFLA 268

Query: 711  KYYDETGIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTMNSVPICFAKNDEVV 532
             +  E  +++W+M++YG + SW KL ++ +       Y++   +  +  P+ ++K+ + V
Sbjct: 269  NFLGER-VDVWMMKEYGVKESWTKLFSVAQ-------YEVIG-FLRSLKPLAYSKSGDEV 319

Query: 531  LMDKSN--LVFYDLKQK 487
            L++  N  L +YDLK+K
Sbjct: 320  LIEHDNLDLCWYDLKRK 336


>gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thaliana]
            gi|21536665|gb|AAM60997.1| unknown [Arabidopsis thaliana]
          Length = 416

 Score =  135 bits (340), Expect = 3e-29
 Identities = 119/397 (29%), Positives = 180/397 (45%), Gaps = 30/397 (7%)
 Frame = -3

Query: 1566 LPHEIIIEILSRLPAKTLITFRCVSKPWRSLTYDTNFIKMHLTRALERDDLNLFVTETSL 1387
            LP EII EIL RLPAK++  FRCVSK + +L+ D  F K+HL   L  + +       SL
Sbjct: 25   LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVR------SL 78

Query: 1386 NHKKV----ELKGVDDDGNEVESRLVSGFECHTHLYCIDGTLFDKLVELRNPLGMTFTNL 1219
            + K +     L  +D +      R ++  E H +    D ++F +++  RN +G      
Sbjct: 79   HRKLIVSSHNLYSLDFNSIGDGIRDLAAVE-HNYPLKDDPSIFSEMI--RNYVGDHL--- 132

Query: 1218 FGPPFDDSKVM----------------GTCNGIVCLA-RRNIVLLLNPTTREFKVVRFGE 1090
                +DD +VM                G+ NG+VC++     V L NPTT + K  R  E
Sbjct: 133  ----YDDRRVMLKLNAKSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSK--RLPE 186

Query: 1089 -------EFDFDYHQNNGFGYDGSTDDYVLVKFINGNGCESSINVYSVNDTLCSTVSDVP 931
                   E++ D  Q  GFG+DG TDDY LVK +  +      +VYS+       + ++ 
Sbjct: 187  NFRPKSVEYERDNFQTYGFGFDGLTDDYKLVKLVATSEDILDASVYSLKADSWRRICNLN 246

Query: 930  YTIADDK-ALGIFLNGAFYWLAYGKGKYSKAIILFDIEQKAFREVQKPVCMGKLAEVTIG 754
            Y   D     G+  NGA +W+        + ++ FDI+ + FRE+  P      +     
Sbjct: 247  YEHNDGSYTSGVHFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSN 306

Query: 753  VTIGKLWGKLCMYCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTM 574
              +G L G+LC+    YD    +IWVM +YG   SW ++       YR            
Sbjct: 307  FVVGSLNGRLCVVNSCYD-VHDDIWVMSEYGEAKSWSRIRI--NLLYRSMK--------- 354

Query: 573  NSVPICFAKNDEVVLMD-KSNLVFYDLKQKTGRRLEI 466
               P+C  KNDE VL++   +LV Y+ +      L I
Sbjct: 355  ---PLCSTKNDEEVLLELDGDLVLYNFETNASSNLGI 388


>ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thaliana]
            gi|75151183|sp|Q8GXC7.1|FBK50_ARATH RecName:
            Full=F-box/kelch-repeat protein At3g06240
            gi|26451648|dbj|BAC42921.1| unknown protein [Arabidopsis
            thaliana] gi|29824145|gb|AAP04033.1| putative F-box
            protein family [Arabidopsis thaliana]
            gi|332640843|gb|AEE74364.1| F-box/kelch-repeat protein
            [Arabidopsis thaliana]
          Length = 427

 Score =  135 bits (340), Expect = 3e-29
 Identities = 119/397 (29%), Positives = 180/397 (45%), Gaps = 30/397 (7%)
 Frame = -3

Query: 1566 LPHEIIIEILSRLPAKTLITFRCVSKPWRSLTYDTNFIKMHLTRALERDDLNLFVTETSL 1387
            LP EII EIL RLPAK++  FRCVSK + +L+ D  F K+HL   L  + +       SL
Sbjct: 36   LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVR------SL 89

Query: 1386 NHKKV----ELKGVDDDGNEVESRLVSGFECHTHLYCIDGTLFDKLVELRNPLGMTFTNL 1219
            + K +     L  +D +      R ++  E H +    D ++F +++  RN +G      
Sbjct: 90   HRKLIVSSHNLYSLDFNSIGDGIRDLAAVE-HNYPLKDDPSIFSEMI--RNYVGDHL--- 143

Query: 1218 FGPPFDDSKVM----------------GTCNGIVCLA-RRNIVLLLNPTTREFKVVRFGE 1090
                +DD +VM                G+ NG+VC++     V L NPTT + K  R  E
Sbjct: 144  ----YDDRRVMLKLNAKSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSK--RLPE 197

Query: 1089 -------EFDFDYHQNNGFGYDGSTDDYVLVKFINGNGCESSINVYSVNDTLCSTVSDVP 931
                   E++ D  Q  GFG+DG TDDY LVK +  +      +VYS+       + ++ 
Sbjct: 198  NFRPKSVEYERDNFQTYGFGFDGLTDDYKLVKLVATSEDILDASVYSLKADSWRRICNLN 257

Query: 930  YTIADDK-ALGIFLNGAFYWLAYGKGKYSKAIILFDIEQKAFREVQKPVCMGKLAEVTIG 754
            Y   D     G+  NGA +W+        + ++ FDI+ + FRE+  P      +     
Sbjct: 258  YEHNDGSYTSGVHFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSN 317

Query: 753  VTIGKLWGKLCMYCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTM 574
              +G L G+LC+    YD    +IWVM +YG   SW ++       YR            
Sbjct: 318  FVVGSLNGRLCVVNSCYD-VHDDIWVMSEYGEAKSWSRIRI--NLLYRSMK--------- 365

Query: 573  NSVPICFAKNDEVVLMD-KSNLVFYDLKQKTGRRLEI 466
               P+C  KNDE VL++   +LV Y+ +      L I
Sbjct: 366  ---PLCSTKNDEEVLLELDGDLVLYNFETNASSNLGI 399


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score =  135 bits (339), Expect = 4e-29
 Identities = 115/395 (29%), Positives = 179/395 (45%), Gaps = 12/395 (3%)
 Frame = -3

Query: 1566 LPHEIIIEILSRLPAKTLITFRCVSKPWRSLTYDTNFIKMHLTRALERDDLNLFVTETSL 1387
            LP E+++EILSRLP K+L+ FRCV K W SL YD  F+K H         L+L    T  
Sbjct: 49   LPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKH---------LHLSSRSTHF 99

Query: 1386 NHKKVELKGVDDDGNEVESRLVSGFECHTHL-YCIDGTLFDKLVELRNPLGMTFTNLFGP 1210
             H ++               ++S      HL  C   +LF+ L  + + L     N    
Sbjct: 100  THHRI---------------ILSATTAEFHLKSCSLSSLFNNLSTVCDELNYPVKN---- 140

Query: 1209 PFDDSKVMGTCNGIVCLA-RRNIVLLLNPTTR-EFKVVRFGEEFDFDYHQNNGFGYDGST 1036
             F    ++G+CNG++C A + + VLL NP+ R   K    G  +        G GYD   
Sbjct: 141  KFRHDGIVGSCNGLLCFAIKGDCVLLWNPSIRVSKKSPPLGNNWRPGCFTAFGLGYDHVN 200

Query: 1035 DDYVLVKFI---NGNGCESSINVYSVNDTLCSTVSDVPYTIADDKALGIFLNGAFYWLA- 868
            +DY +V      +    E  + VYS+       + D P+  +  +  G F++G   W A 
Sbjct: 201  EDYKVVAVFCDPSEYFIECKVKVYSMATNSWRKIQDFPHGFSPFQNSGKFVSGTLNWAAN 260

Query: 867  YGKGKYSK-AIILFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLWGKLCMYCKYYDETG 691
            +  G  S   I+  D+ ++ +REV  P       E      +G L G LCM    Y +T 
Sbjct: 261  HSIGSSSLWVIVSLDLHKETYREVLPP---DYEKEDCSTPGLGVLQGCLCMNYD-YKKTH 316

Query: 690  IEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTMNSVPICFAKNDEVVLMDKSNL 511
              +W+M+DYG R SW KL++IP        Y         S P   ++N EV+LM + +L
Sbjct: 317  FVVWMMKDYGARESWVKLVSIP--------YVPNPENFSYSGPYYISENGEVLLMFEFDL 368

Query: 510  VFYDLKQKTGRRLEIHNNLDWSK----IDRLVTPV 418
            + Y+ +  + +  +I +   W      ++ LV+P+
Sbjct: 369  ILYNPRDNSFKYPKIESGKGWFDAEVYVETLVSPM 403


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 366

 Score =  131 bits (330), Expect = 4e-28
 Identities = 118/396 (29%), Positives = 180/396 (45%), Gaps = 13/396 (3%)
 Frame = -3

Query: 1566 LPHEIIIEILSRLPAKTLITFRCVSKPWRSLTYDTNFIKMHLTRALERDDLNLFVTETSL 1387
            LP E+I+EIL +LP K+L+ FRCV K W  +  +  FIK  L  + +        T  + 
Sbjct: 8    LPEELILEILIKLPIKSLLRFRCVCKSWLHIISNPYFIKKQLHFSTQN-------THFTT 60

Query: 1386 NHKKVELKGVDDDGNEVESRLVSGFECHTHL-YCIDGTLFDKLVELRNPLGMTFTNLFGP 1210
            NH+ +                +S      HL  C   +LF+    + + L     N    
Sbjct: 61   NHRII----------------LSATTAEFHLKSCSITSLFNNPSTVSDDLNYPVKN---- 100

Query: 1209 PFDDSKVMGTCNGIVCLA-RRNIVLLLNPTTR-EFKVVRFGEEFDFDYHQNNGFGYDGST 1036
             F    ++G+CNG++C A + + VLL NP+ R   K    G  +        G GYD   
Sbjct: 101  KFRHDGIVGSCNGLLCFAIKGDCVLLWNPSIRVSKKSPPLGNNWRPGCFTCFGLGYDHVN 160

Query: 1035 DDY-VLVKFINGNG--CESSINVYSVNDTLCSTVSDVPYTIAD-DKALGIFLNGAFYWLA 868
            DDY V+  F + N    ES + VYS+       + D P+ ++    + G F++G   W +
Sbjct: 161  DDYKVVAVFCDPNEFFSESKVKVYSMATNTWRKIHDFPHGVSPYQNSSGKFVSGTLNWAS 220

Query: 867  -YGKGKYS-KAIILFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLWGKLCMYCKYYDET 694
             Y  G  S   I+  D+E++ +REV  P       E     ++  L G LCM    Y +T
Sbjct: 221  NYSIGSSSFWTIVSLDLEKETYREVLPP---DYEKEECSTPSLSVLKGCLCMNYD-YKKT 276

Query: 693  GIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTMNSVPICFAKNDEVVLMDKSN 514
               +W+M+DYG R SW KLL IP   Y     D +      S P C ++N EV+LM + +
Sbjct: 277  DFVVWLMKDYGVRESWIKLLTIP---YLPNPEDFS-----YSGPYCISENGEVLLMFEFD 328

Query: 513  LVFYDLKQKTGRRLEIHNNLDWSK----IDRLVTPV 418
            L+ YD +  + R   I     W      ++ LV+P+
Sbjct: 329  LILYDPRDHSFRYPRIEGGKGWFDAEVYVESLVSPM 364