BLASTX nr result

ID: Coptis25_contig00021630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021630
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36913.1| unknown [Medicago truncatula]                          102   4e-20
gb|ACU24220.1| unknown [Glycine max]                                   99   4e-19
ref|NP_001242179.1| uncharacterized protein LOC100818762 [Glycin...    97   1e-18
gb|AFK44366.1| unknown [Lotus japonicus]                               97   2e-18
gb|AFK35812.1| unknown [Lotus japonicus]                               97   2e-18

>gb|AFK36913.1| unknown [Medicago truncatula]
          Length = 239

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/77 (68%), Positives = 62/77 (80%)
 Frame = -1

Query: 232 MGMATETQYHVLAVDDNFIDRKLVERLFKISSFHVTTVDSGSKALEFLGLVDNDHVNKSS 53
           MGMA E+Q+HVLAVDD+ IDRKL+ERL K SS+ VTTVDSGSKALEFLGL +ND  N ++
Sbjct: 1   MGMAAESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNT 60

Query: 52  CPPSVPSALHQEMEVNL 2
             PSV    HQE+EVNL
Sbjct: 61  --PSVFPNNHQEVEVNL 75


>gb|ACU24220.1| unknown [Glycine max]
          Length = 191

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/77 (63%), Positives = 60/77 (77%)
 Frame = -1

Query: 232 MGMATETQYHVLAVDDNFIDRKLVERLFKISSFHVTTVDSGSKALEFLGLVDNDHVNKSS 53
           MGMA E Q+HVLAVDD+ IDR L+ERL K SSFHVT +DSGSKAL+FLGL +++  NK  
Sbjct: 1   MGMAAEAQFHVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLAEDEQRNKE- 59

Query: 52  CPPSVPSALHQEMEVNL 2
            PPS+    HQ++EVNL
Sbjct: 60  -PPSIALESHQDVEVNL 75


>ref|NP_001242179.1| uncharacterized protein LOC100818762 [Glycine max]
           gi|255633210|gb|ACU16961.1| unknown [Glycine max]
          Length = 172

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/77 (63%), Positives = 60/77 (77%)
 Frame = -1

Query: 232 MGMATETQYHVLAVDDNFIDRKLVERLFKISSFHVTTVDSGSKALEFLGLVDNDHVNKSS 53
           MGMA E Q+ VLAVDD+ IDR L+ERL K SSFHVT +DSGSKAL+FLGLV+++  NK  
Sbjct: 1   MGMAAEAQFQVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLVEDEQRNKE- 59

Query: 52  CPPSVPSALHQEMEVNL 2
            PPS+    HQ++EVNL
Sbjct: 60  -PPSIALESHQDVEVNL 75


>gb|AFK44366.1| unknown [Lotus japonicus]
          Length = 239

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = -1

Query: 232 MGMAT-ETQYHVLAVDDNFIDRKLVERLFKISSFHVTTVDSGSKALEFLGLVDNDHVNKS 56
           MGMA  E+QYHVLAVDD+ IDRKL+ERL K SS+ VTTVDSGSKALEFLGL +N+  N +
Sbjct: 1   MGMAAAESQYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPN 60

Query: 55  SCPPSVPSALHQEMEVNL 2
           +  PS+    HQE+EVNL
Sbjct: 61  T--PSISPNNHQEVEVNL 76


>gb|AFK35812.1| unknown [Lotus japonicus]
          Length = 239

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = -1

Query: 232 MGMAT-ETQYHVLAVDDNFIDRKLVERLFKISSFHVTTVDSGSKALEFLGLVDNDHVNKS 56
           MGMA  E+QYHVLAVDD+ IDRKL+ERL K SS+ VTTVDSGSKALEFLGL +N+  N +
Sbjct: 1   MGMAAAESQYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPN 60

Query: 55  SCPPSVPSALHQEMEVNL 2
           +  PS+    HQE+EVNL
Sbjct: 61  T--PSISPNNHQEVEVNL 76


Top