BLASTX nr result
ID: Coptis25_contig00021620
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021620 (966 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi... 411 e-112 ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containi... 411 e-112 ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containi... 410 e-112 ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containi... 408 e-111 gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsu... 407 e-111 >ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Cucumis sativus] Length = 663 Score = 411 bits (1057), Expect = e-112 Identities = 183/294 (62%), Positives = 245/294 (83%) Frame = -2 Query: 965 GYGKEAIELFHQMRTCGPRPNDVTFIAVLSACAHAGLVEKGREVLTCMKQMYGLVPRVEH 786 GYG++A+ELF +MR GPRPN++TF+AVLSACAH+GL++ GR V + MK+ YGLVP VEH Sbjct: 370 GYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEH 429 Query: 785 HVCMVDMLGRAGFLNEAFQYIEESFHGKPPAAVCTAMLGACKMHKKYELGVQVAEHLPTI 606 +VCMVDM GRAG LN+A+Q+I++ +P AV T+MLGAC+MH+ ++LGV+VAEH+ ++ Sbjct: 430 NVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSV 489 Query: 605 EPDNPGHYVLLSDMYALAGRMDRVEVIRKLMRRKGLKKQVGYTVIEVDNVSHMFCLGDTS 426 EP+NPGHYV+LS++YALAGRMDRVE++R +M R+ LKKQVGY+ IE++ +++F +GD S Sbjct: 490 EPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKS 549 Query: 425 HPHTAEIYKYLENLMWKCKQAGYIPETDSMMHDLXXXXXEFALRFHSEKLAIAFGLMKTS 246 HP T IY+YL+ LM +C ++GY+P +S+MHDL ++ALR+HSEKLA+AFGL+KT+ Sbjct: 550 HPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTN 609 Query: 245 QGSTIRIIKNLRMCDDCHSTIKFISTVTCREIIVRDKHRFHHFTEGSCSCLDYW 84 QG TIRI+KNLR+C+DCHS IK IS + REIIVRDK RFHHF +GSCSCLDYW Sbjct: 610 QGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663 >ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Cucumis sativus] Length = 599 Score = 411 bits (1057), Expect = e-112 Identities = 183/294 (62%), Positives = 245/294 (83%) Frame = -2 Query: 965 GYGKEAIELFHQMRTCGPRPNDVTFIAVLSACAHAGLVEKGREVLTCMKQMYGLVPRVEH 786 GYG++A+ELF +MR GPRPN++TF+AVLSACAH+GL++ GR V + MK+ YGLVP VEH Sbjct: 306 GYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEH 365 Query: 785 HVCMVDMLGRAGFLNEAFQYIEESFHGKPPAAVCTAMLGACKMHKKYELGVQVAEHLPTI 606 +VCMVDM GRAG LN+A+Q+I++ +P AV T+MLGAC+MH+ ++LGV+VAEH+ ++ Sbjct: 366 NVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSV 425 Query: 605 EPDNPGHYVLLSDMYALAGRMDRVEVIRKLMRRKGLKKQVGYTVIEVDNVSHMFCLGDTS 426 EP+NPGHYV+LS++YALAGRMDRVE++R +M R+ LKKQVGY+ IE++ +++F +GD S Sbjct: 426 EPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKS 485 Query: 425 HPHTAEIYKYLENLMWKCKQAGYIPETDSMMHDLXXXXXEFALRFHSEKLAIAFGLMKTS 246 HP T IY+YL+ LM +C ++GY+P +S+MHDL ++ALR+HSEKLA+AFGL+KT+ Sbjct: 486 HPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTN 545 Query: 245 QGSTIRIIKNLRMCDDCHSTIKFISTVTCREIIVRDKHRFHHFTEGSCSCLDYW 84 QG TIRI+KNLR+C+DCHS IK IS + REIIVRDK RFHHF +GSCSCLDYW Sbjct: 546 QGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599 >ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Glycine max] Length = 582 Score = 410 bits (1054), Expect = e-112 Identities = 194/294 (65%), Positives = 235/294 (79%) Frame = -2 Query: 965 GYGKEAIELFHQMRTCGPRPNDVTFIAVLSACAHAGLVEKGREVLTCMKQMYGLVPRVEH 786 GYG EA+E+FH+M+ CG PN VT++AVLSACAHAGL+ +GR V MKQ YG+VP VEH Sbjct: 289 GYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEH 348 Query: 785 HVCMVDMLGRAGFLNEAFQYIEESFHGKPPAAVCTAMLGACKMHKKYELGVQVAEHLPTI 606 HVCMVDM GR G LNEA+Q++ + AV TAMLGACKMHK ++LGV+VAE+L + Sbjct: 349 HVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISA 408 Query: 605 EPDNPGHYVLLSDMYALAGRMDRVEVIRKLMRRKGLKKQVGYTVIEVDNVSHMFCLGDTS 426 EP+NPGHYVLLS+MYALAGRMDRVE +R +M ++GLKKQVGY+ I+V+N S++F +GD S Sbjct: 409 EPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKS 468 Query: 425 HPHTAEIYKYLENLMWKCKQAGYIPETDSMMHDLXXXXXEFALRFHSEKLAIAFGLMKTS 246 HP T EIY YL+ LMW+CK AGY P +S MH+L E+ALR+HSEKLA+AFGLMKT Sbjct: 469 HPETNEIYCYLDELMWRCKDAGYAPAPESAMHELEEEEREYALRYHSEKLAVAFGLMKTC 528 Query: 245 QGSTIRIIKNLRMCDDCHSTIKFISTVTCREIIVRDKHRFHHFTEGSCSCLDYW 84 G T+RI+KNLR+C+DCHS IKFIS V REIIVRDK RFHHF EGSCSC DYW Sbjct: 529 HGVTLRIVKNLRICEDCHSAIKFISVVMNREIIVRDKLRFHHFREGSCSCSDYW 582 >ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Glycine max] Length = 582 Score = 408 bits (1048), Expect = e-111 Identities = 193/294 (65%), Positives = 235/294 (79%) Frame = -2 Query: 965 GYGKEAIELFHQMRTCGPRPNDVTFIAVLSACAHAGLVEKGREVLTCMKQMYGLVPRVEH 786 GYG EA+E+FH+M+ G PN VTF+AVLSACAHAGL+++GR V MKQ YG+VP VEH Sbjct: 289 GYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEH 348 Query: 785 HVCMVDMLGRAGFLNEAFQYIEESFHGKPPAAVCTAMLGACKMHKKYELGVQVAEHLPTI 606 HVCMVDM GR G LNEA+Q+++ + AV TAMLGACKMHK ++LGV+VAE+L Sbjct: 349 HVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINA 408 Query: 605 EPDNPGHYVLLSDMYALAGRMDRVEVIRKLMRRKGLKKQVGYTVIEVDNVSHMFCLGDTS 426 EP+NPGHYVLLS+MYALAGRMDRVE +R +M ++GLKKQVGY+ I+VDN S++F +GD S Sbjct: 409 EPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKS 468 Query: 425 HPHTAEIYKYLENLMWKCKQAGYIPETDSMMHDLXXXXXEFALRFHSEKLAIAFGLMKTS 246 HP T EIY +L+ L+W+CK AGY P +S MH+L E+ALR+HSEKLA+AFGLMKT Sbjct: 469 HPETNEIYCFLDELIWRCKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTG 528 Query: 245 QGSTIRIIKNLRMCDDCHSTIKFISTVTCREIIVRDKHRFHHFTEGSCSCLDYW 84 G T+RI+KNLR+C+DCHS IKFIS V REIIVRDK RFHHF EGSCSC DYW Sbjct: 529 DGVTLRIVKNLRICEDCHSAIKFISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582 >gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum] gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum] Length = 592 Score = 407 bits (1047), Expect = e-111 Identities = 191/294 (64%), Positives = 242/294 (82%) Frame = -2 Query: 965 GYGKEAIELFHQMRTCGPRPNDVTFIAVLSACAHAGLVEKGREVLTCMKQMYGLVPRVEH 786 G+G +AIELF++M GPRPN+VTF+AVLSACAHAGLV++GR++ T MKQ YGLVP VEH Sbjct: 299 GHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEH 358 Query: 785 HVCMVDMLGRAGFLNEAFQYIEESFHGKPPAAVCTAMLGACKMHKKYELGVQVAEHLPTI 606 VCMVDMLGRAG LNEA+Q+I+ + +P AV TAMLGACKMHK ++LGV+VAEHL +I Sbjct: 359 QVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSI 418 Query: 605 EPDNPGHYVLLSDMYALAGRMDRVEVIRKLMRRKGLKKQVGYTVIEVDNVSHMFCLGDTS 426 EP+NPGHYV+LS++YALAGRMDRVE IR +M R LKK+VGY+ I+VD+ ++F +GD S Sbjct: 419 EPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKS 478 Query: 425 HPHTAEIYKYLENLMWKCKQAGYIPETDSMMHDLXXXXXEFALRFHSEKLAIAFGLMKTS 246 HP T +IY YL+ LM +C++AGYIP ++S+MH++ E+ALR+HSEKLAIAFGL+KT Sbjct: 479 HPKTNQIYLYLDELMSRCREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTG 538 Query: 245 QGSTIRIIKNLRMCDDCHSTIKFISTVTCREIIVRDKHRFHHFTEGSCSCLDYW 84 G IRI+KNLRMC+DCH+ IK+IS + REI VRD+ RFHHF +GSCSC DYW Sbjct: 539 SGVAIRIVKNLRMCEDCHTAIKYISIIANREINVRDRLRFHHFKDGSCSCQDYW 592