BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021620
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi...   411   e-112
ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containi...   411   e-112
ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containi...   410   e-112
ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containi...   408   e-111
gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsu...   407   e-111

>ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like
            [Cucumis sativus]
          Length = 663

 Score =  411 bits (1057), Expect = e-112
 Identities = 183/294 (62%), Positives = 245/294 (83%)
 Frame = -2

Query: 965  GYGKEAIELFHQMRTCGPRPNDVTFIAVLSACAHAGLVEKGREVLTCMKQMYGLVPRVEH 786
            GYG++A+ELF +MR  GPRPN++TF+AVLSACAH+GL++ GR V + MK+ YGLVP VEH
Sbjct: 370  GYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEH 429

Query: 785  HVCMVDMLGRAGFLNEAFQYIEESFHGKPPAAVCTAMLGACKMHKKYELGVQVAEHLPTI 606
            +VCMVDM GRAG LN+A+Q+I++    +P  AV T+MLGAC+MH+ ++LGV+VAEH+ ++
Sbjct: 430  NVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSV 489

Query: 605  EPDNPGHYVLLSDMYALAGRMDRVEVIRKLMRRKGLKKQVGYTVIEVDNVSHMFCLGDTS 426
            EP+NPGHYV+LS++YALAGRMDRVE++R +M R+ LKKQVGY+ IE++  +++F +GD S
Sbjct: 490  EPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKS 549

Query: 425  HPHTAEIYKYLENLMWKCKQAGYIPETDSMMHDLXXXXXEFALRFHSEKLAIAFGLMKTS 246
            HP T  IY+YL+ LM +C ++GY+P  +S+MHDL     ++ALR+HSEKLA+AFGL+KT+
Sbjct: 550  HPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTN 609

Query: 245  QGSTIRIIKNLRMCDDCHSTIKFISTVTCREIIVRDKHRFHHFTEGSCSCLDYW 84
            QG TIRI+KNLR+C+DCHS IK IS +  REIIVRDK RFHHF +GSCSCLDYW
Sbjct: 610  QGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663


>ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like
            [Cucumis sativus]
          Length = 599

 Score =  411 bits (1057), Expect = e-112
 Identities = 183/294 (62%), Positives = 245/294 (83%)
 Frame = -2

Query: 965  GYGKEAIELFHQMRTCGPRPNDVTFIAVLSACAHAGLVEKGREVLTCMKQMYGLVPRVEH 786
            GYG++A+ELF +MR  GPRPN++TF+AVLSACAH+GL++ GR V + MK+ YGLVP VEH
Sbjct: 306  GYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEH 365

Query: 785  HVCMVDMLGRAGFLNEAFQYIEESFHGKPPAAVCTAMLGACKMHKKYELGVQVAEHLPTI 606
            +VCMVDM GRAG LN+A+Q+I++    +P  AV T+MLGAC+MH+ ++LGV+VAEH+ ++
Sbjct: 366  NVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSV 425

Query: 605  EPDNPGHYVLLSDMYALAGRMDRVEVIRKLMRRKGLKKQVGYTVIEVDNVSHMFCLGDTS 426
            EP+NPGHYV+LS++YALAGRMDRVE++R +M R+ LKKQVGY+ IE++  +++F +GD S
Sbjct: 426  EPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKS 485

Query: 425  HPHTAEIYKYLENLMWKCKQAGYIPETDSMMHDLXXXXXEFALRFHSEKLAIAFGLMKTS 246
            HP T  IY+YL+ LM +C ++GY+P  +S+MHDL     ++ALR+HSEKLA+AFGL+KT+
Sbjct: 486  HPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTN 545

Query: 245  QGSTIRIIKNLRMCDDCHSTIKFISTVTCREIIVRDKHRFHHFTEGSCSCLDYW 84
            QG TIRI+KNLR+C+DCHS IK IS +  REIIVRDK RFHHF +GSCSCLDYW
Sbjct: 546  QGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599


>ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like
            [Glycine max]
          Length = 582

 Score =  410 bits (1054), Expect = e-112
 Identities = 194/294 (65%), Positives = 235/294 (79%)
 Frame = -2

Query: 965  GYGKEAIELFHQMRTCGPRPNDVTFIAVLSACAHAGLVEKGREVLTCMKQMYGLVPRVEH 786
            GYG EA+E+FH+M+ CG  PN VT++AVLSACAHAGL+ +GR V   MKQ YG+VP VEH
Sbjct: 289  GYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEH 348

Query: 785  HVCMVDMLGRAGFLNEAFQYIEESFHGKPPAAVCTAMLGACKMHKKYELGVQVAEHLPTI 606
            HVCMVDM GR G LNEA+Q++      +   AV TAMLGACKMHK ++LGV+VAE+L + 
Sbjct: 349  HVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISA 408

Query: 605  EPDNPGHYVLLSDMYALAGRMDRVEVIRKLMRRKGLKKQVGYTVIEVDNVSHMFCLGDTS 426
            EP+NPGHYVLLS+MYALAGRMDRVE +R +M ++GLKKQVGY+ I+V+N S++F +GD S
Sbjct: 409  EPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKS 468

Query: 425  HPHTAEIYKYLENLMWKCKQAGYIPETDSMMHDLXXXXXEFALRFHSEKLAIAFGLMKTS 246
            HP T EIY YL+ LMW+CK AGY P  +S MH+L     E+ALR+HSEKLA+AFGLMKT 
Sbjct: 469  HPETNEIYCYLDELMWRCKDAGYAPAPESAMHELEEEEREYALRYHSEKLAVAFGLMKTC 528

Query: 245  QGSTIRIIKNLRMCDDCHSTIKFISTVTCREIIVRDKHRFHHFTEGSCSCLDYW 84
             G T+RI+KNLR+C+DCHS IKFIS V  REIIVRDK RFHHF EGSCSC DYW
Sbjct: 529  HGVTLRIVKNLRICEDCHSAIKFISVVMNREIIVRDKLRFHHFREGSCSCSDYW 582


>ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like
            [Glycine max]
          Length = 582

 Score =  408 bits (1048), Expect = e-111
 Identities = 193/294 (65%), Positives = 235/294 (79%)
 Frame = -2

Query: 965  GYGKEAIELFHQMRTCGPRPNDVTFIAVLSACAHAGLVEKGREVLTCMKQMYGLVPRVEH 786
            GYG EA+E+FH+M+  G  PN VTF+AVLSACAHAGL+++GR V   MKQ YG+VP VEH
Sbjct: 289  GYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEH 348

Query: 785  HVCMVDMLGRAGFLNEAFQYIEESFHGKPPAAVCTAMLGACKMHKKYELGVQVAEHLPTI 606
            HVCMVDM GR G LNEA+Q+++     +   AV TAMLGACKMHK ++LGV+VAE+L   
Sbjct: 349  HVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINA 408

Query: 605  EPDNPGHYVLLSDMYALAGRMDRVEVIRKLMRRKGLKKQVGYTVIEVDNVSHMFCLGDTS 426
            EP+NPGHYVLLS+MYALAGRMDRVE +R +M ++GLKKQVGY+ I+VDN S++F +GD S
Sbjct: 409  EPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKS 468

Query: 425  HPHTAEIYKYLENLMWKCKQAGYIPETDSMMHDLXXXXXEFALRFHSEKLAIAFGLMKTS 246
            HP T EIY +L+ L+W+CK AGY P  +S MH+L     E+ALR+HSEKLA+AFGLMKT 
Sbjct: 469  HPETNEIYCFLDELIWRCKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTG 528

Query: 245  QGSTIRIIKNLRMCDDCHSTIKFISTVTCREIIVRDKHRFHHFTEGSCSCLDYW 84
             G T+RI+KNLR+C+DCHS IKFIS V  REIIVRDK RFHHF EGSCSC DYW
Sbjct: 529  DGVTLRIVKNLRICEDCHSAIKFISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582


>gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
            gi|227463002|gb|ACP39953.1| pentatricopeptide repeat
            protein [Gossypium hirsutum]
          Length = 592

 Score =  407 bits (1047), Expect = e-111
 Identities = 191/294 (64%), Positives = 242/294 (82%)
 Frame = -2

Query: 965  GYGKEAIELFHQMRTCGPRPNDVTFIAVLSACAHAGLVEKGREVLTCMKQMYGLVPRVEH 786
            G+G +AIELF++M   GPRPN+VTF+AVLSACAHAGLV++GR++ T MKQ YGLVP VEH
Sbjct: 299  GHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEH 358

Query: 785  HVCMVDMLGRAGFLNEAFQYIEESFHGKPPAAVCTAMLGACKMHKKYELGVQVAEHLPTI 606
             VCMVDMLGRAG LNEA+Q+I+ +   +P  AV TAMLGACKMHK ++LGV+VAEHL +I
Sbjct: 359  QVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSI 418

Query: 605  EPDNPGHYVLLSDMYALAGRMDRVEVIRKLMRRKGLKKQVGYTVIEVDNVSHMFCLGDTS 426
            EP+NPGHYV+LS++YALAGRMDRVE IR +M R  LKK+VGY+ I+VD+  ++F +GD S
Sbjct: 419  EPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKS 478

Query: 425  HPHTAEIYKYLENLMWKCKQAGYIPETDSMMHDLXXXXXEFALRFHSEKLAIAFGLMKTS 246
            HP T +IY YL+ LM +C++AGYIP ++S+MH++     E+ALR+HSEKLAIAFGL+KT 
Sbjct: 479  HPKTNQIYLYLDELMSRCREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTG 538

Query: 245  QGSTIRIIKNLRMCDDCHSTIKFISTVTCREIIVRDKHRFHHFTEGSCSCLDYW 84
             G  IRI+KNLRMC+DCH+ IK+IS +  REI VRD+ RFHHF +GSCSC DYW
Sbjct: 539  SGVAIRIVKNLRMCEDCHTAIKYISIIANREINVRDRLRFHHFKDGSCSCQDYW 592