BLASTX nr result

ID: Coptis25_contig00021611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021611
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280184.1| PREDICTED: uncharacterized protein LOC100252...    75   6e-12
ref|XP_003534235.1| PREDICTED: uncharacterized protein LOC100815...    70   2e-10
ref|XP_002521719.1| conserved hypothetical protein [Ricinus comm...    69   3e-10
ref|XP_002307214.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
gb|AFK41533.1| unknown [Lotus japonicus]                               67   1e-09

>ref|XP_002280184.1| PREDICTED: uncharacterized protein LOC100252414 [Vitis vinifera]
           gi|296088655|emb|CBI37646.3| unnamed protein product
           [Vitis vinifera]
          Length = 176

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 33/44 (75%), Positives = 40/44 (90%)
 Frame = -3

Query: 497 QLLQPFGKVLSWRAGDLDNDHIMVGIIPWLIVSNRVSKFICQKL 366
           QL+QPFGKVLSWR+G   ND++MVGIIPWLI+S RVSKFIC+K+
Sbjct: 131 QLVQPFGKVLSWRSGVSSNDNVMVGIIPWLILSTRVSKFICRKV 174


>ref|XP_003534235.1| PREDICTED: uncharacterized protein LOC100815853 [Glycine max]
          Length = 175

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = -3

Query: 497 QLLQPFGKVLSWRAGDLDNDHIMVGIIPWLIVSNRVSKFICQ 372
           QL+QPFG++LSWR G + N +IMVGIIPWLIVS RVS+FIC+
Sbjct: 129 QLVQPFGRLLSWRTGGVQNSNIMVGIIPWLIVSTRVSRFICR 170


>ref|XP_002521719.1| conserved hypothetical protein [Ricinus communis]
           gi|223539110|gb|EEF40706.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 180

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/42 (69%), Positives = 38/42 (90%)
 Frame = -3

Query: 497 QLLQPFGKVLSWRAGDLDNDHIMVGIIPWLIVSNRVSKFICQ 372
           QL+QPFG++LSW AG L ND+++VGIIPWLI+S RVSKF+C+
Sbjct: 136 QLVQPFGRMLSWGAGGLFNDNVLVGIIPWLILSTRVSKFVCR 177


>ref|XP_002307214.1| predicted protein [Populus trichocarpa] gi|222856663|gb|EEE94210.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/42 (69%), Positives = 37/42 (88%)
 Frame = -3

Query: 497 QLLQPFGKVLSWRAGDLDNDHIMVGIIPWLIVSNRVSKFICQ 372
           QL+QPFG+ LSWRAG   N+++MVGIIPWLI+S RVSKF+C+
Sbjct: 136 QLVQPFGRFLSWRAGGRLNNNVMVGIIPWLILSTRVSKFVCR 177


>gb|AFK41533.1| unknown [Lotus japonicus]
          Length = 174

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 28/42 (66%), Positives = 37/42 (88%)
 Frame = -3

Query: 497 QLLQPFGKVLSWRAGDLDNDHIMVGIIPWLIVSNRVSKFICQ 372
           QL+QPFG++LSWR G + N++IMVGIIPWL+V  RVS+FIC+
Sbjct: 128 QLVQPFGRLLSWRTGGVQNNNIMVGIIPWLVVCCRVSRFICR 169


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