BLASTX nr result

ID: Coptis25_contig00021608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021608
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285725.2| PREDICTED: protein TRANSPARENT TESTA 12-like...   117   1e-24
emb|CAN67847.1| hypothetical protein VITISV_025689 [Vitis vinifera]   117   1e-24
ref|XP_002306557.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002302326.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002513991.1| multidrug resistance pump, putative [Ricinus...   109   3e-22

>ref|XP_002285725.2| PREDICTED: protein TRANSPARENT TESTA 12-like [Vitis vinifera]
           gi|302142015|emb|CBI19218.3| unnamed protein product
           [Vitis vinifera]
          Length = 484

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/78 (73%), Positives = 67/78 (85%)
 Frame = -1

Query: 235 EEDSLSARVWNESKKMWKVAGPAIFSRVALFSMTLISQSFAGHLSALDLASFSIATTVII 56
           +  SL    W ESKKMWK+A P+IFSR+A+FSMTL++Q+FAGHL  LDLA+ SIATTVII
Sbjct: 24  QAQSLILETWLESKKMWKIAAPSIFSRLAMFSMTLLTQAFAGHLGDLDLAAISIATTVII 83

Query: 55  TISFGFLLGMASALETLC 2
           +ISFGFLLGMASALETLC
Sbjct: 84  SISFGFLLGMASALETLC 101


>emb|CAN67847.1| hypothetical protein VITISV_025689 [Vitis vinifera]
          Length = 528

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/78 (73%), Positives = 67/78 (85%)
 Frame = -1

Query: 235 EEDSLSARVWNESKKMWKVAGPAIFSRVALFSMTLISQSFAGHLSALDLASFSIATTVII 56
           +  SL    W ESKKMWK+A P+IFSR+A+FSMTL++Q+FAGHL  LDLA+ SIATTVII
Sbjct: 68  QAQSLILETWLESKKMWKIAAPSIFSRLAMFSMTLLTQAFAGHLGDLDLAAISIATTVII 127

Query: 55  TISFGFLLGMASALETLC 2
           +ISFGFLLGMASALETLC
Sbjct: 128 SISFGFLLGMASALETLC 145


>ref|XP_002306557.1| predicted protein [Populus trichocarpa] gi|222856006|gb|EEE93553.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/70 (75%), Positives = 66/70 (94%)
 Frame = -1

Query: 211 VWNESKKMWKVAGPAIFSRVALFSMTLISQSFAGHLSALDLASFSIATTVIITISFGFLL 32
           +W ESK++W++AGP+IFSR+A+FSMT+I+QSFAGHL  L+LAS SIATT+II+ISFGFLL
Sbjct: 39  IWLESKELWQIAGPSIFSRLAMFSMTVITQSFAGHLGDLNLASISIATTLIISISFGFLL 98

Query: 31  GMASALETLC 2
           GMASALETLC
Sbjct: 99  GMASALETLC 108


>ref|XP_002302326.1| predicted protein [Populus trichocarpa] gi|222844052|gb|EEE81599.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/80 (63%), Positives = 67/80 (83%)
 Frame = -1

Query: 241 EEEEDSLSARVWNESKKMWKVAGPAIFSRVALFSMTLISQSFAGHLSALDLASFSIATTV 62
           +E +D L++RVW E+KK+W++ GPAIFSRVA FSM +I+Q+FAGHL  ++LA+ SIA TV
Sbjct: 27  QENQDPLASRVWTETKKLWEIVGPAIFSRVATFSMNIITQAFAGHLGDVELAAISIANTV 86

Query: 61  IITISFGFLLGMASALETLC 2
           I+  +FG LLGMASALETLC
Sbjct: 87  IVGFNFGLLLGMASALETLC 106


>ref|XP_002513991.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223547077|gb|EEF48574.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 490

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/75 (69%), Positives = 66/75 (88%)
 Frame = -1

Query: 226 SLSARVWNESKKMWKVAGPAIFSRVALFSMTLISQSFAGHLSALDLASFSIATTVIITIS 47
           +L    W ES K+W++AGP+IFSR+A+FSMT+I+Q+FAGHLS ++LA+ SIATTVII +S
Sbjct: 35  TLVQETWLESIKIWEIAGPSIFSRLAMFSMTVITQAFAGHLSDINLAAISIATTVIIAVS 94

Query: 46  FGFLLGMASALETLC 2
           FGFLLGMASALETLC
Sbjct: 95  FGFLLGMASALETLC 109


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