BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021604
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            66   3e-09
emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]    65   6e-09
emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]    65   7e-09
emb|CAN77982.1| hypothetical protein VITISV_043417 [Vitis vinifera]    63   3e-08
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    62   4e-08

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = +2

Query: 86   KMTYIRVVLGLTASMNLEVE*LDVKTTFLHGDLEEDVYMDQ 208
            KMT IR VLGL AS+NLEVE +DVKT FLHGDLEE++YM+Q
Sbjct: 901  KMTSIRTVLGLAASLNLEVEQMDVKTAFLHGDLEEEIYMEQ 941


>emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]
          Length = 809

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/41 (68%), Positives = 39/41 (95%)
 Frame = +2

Query: 86  KMTYIRVVLGLTASMNLEVE*LDVKTTFLHGDLEEDVYMDQ 208
           KM++IRVVLGL AS++LE+E +DVKTTFLHGDL++++YM+Q
Sbjct: 379 KMSFIRVVLGLAASLDLEIEQMDVKTTFLHGDLDKEIYMEQ 419


>emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]
          Length = 623

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = +2

Query: 86  KMTYIRVVLGLTASMNLEVE*LDVKTTFLHGDLEEDVYMDQ 208
           KM+ IRVVLGL ASMNLE+E LD KT FLHGDLEE++YM+Q
Sbjct: 447 KMSLIRVVLGLVASMNLEIEQLDGKTAFLHGDLEEEMYMEQ 487


>emb|CAN77982.1| hypothetical protein VITISV_043417 [Vitis vinifera]
          Length = 440

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = +2

Query: 86  KMTYIRVVLGLTASMNLEVE*LDVKTTFLHGDLEEDVYMDQ 208
           KM  IRVVLGL AS+NLE+E LDVKTTFLHG LEE++Y++Q
Sbjct: 67  KMFSIRVVLGLAASINLEIEQLDVKTTFLHGHLEEEIYIEQ 107


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +2

Query: 86   KMTYIRVVLGLTASMNLEVE*LDVKTTFLHGDLEEDVYMDQ 208
            KMT IR +L L AS++LEVE LDVKT FLHGDLEE++YM+Q
Sbjct: 900  KMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQ 940