BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021603
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   153   8e-35
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   147   7e-33
ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|2...   146   9e-33
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   132   2e-28
ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-27

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  153 bits (387), Expect = 8e-35
 Identities = 121/388 (31%), Positives = 181/388 (46%), Gaps = 33/388 (8%)
 Frame = -1

Query: 1122 PDEISISILSWLHIRYLMRCRCVSRNWRLLISDPIFVDMHLNNQRLLQLNDMVDTDLVVI 943
            P EI+  ILS L I  L++ +CV R WR L+ DP  VD++L+           DTD   +
Sbjct: 29   PREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQ-------DTDHPCL 81

Query: 942  VRETFLPV--NFYMLENIGCTNES--VKPFPVP-PSHLTKCKVVNSCNGLLCLRGITMLN 778
            +     P+  N Y ++      E   VK  P P  S + + +VV SCNGLLCL   ++ N
Sbjct: 82   ILHCDFPIRNNLYFVDFAAHEEEKEKVKRIPAPFSSMMPEFEVVGSCNGLLCLSD-SLYN 140

Query: 777  QLIYIWNPFTGEILDIPLSPDLMEVRIFC-FGYDSTSNVYKVVVISY-----PGIPLLDD 616
              +YI+NPFTG   ++P S    +  +   FG++  +  YKV+ I Y      G P    
Sbjct: 141  DSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRR 200

Query: 615  DTEFLVVAEVWTLGSGSWRKIEKVPFLPVNQQFS--MEGSLYWKSYESYESDVVGIGSFH 442
                L   ++ TLG   WR + KV +  V +     + G L+W S          + SF 
Sbjct: 201  IIYPLSEVQILTLGCPEWRSLGKVSYRLVRRASGALVNGRLHWISRPCRNKPARRLVSFD 260

Query: 441  VRTEEFQFVSLPPSFNSVLNTGYVDIGALGGCIALVDYYASPGHAEIWIMKHLGVQESWT 262
            +  E+F+ VS P      LN     +  L GC++    Y + G  EIW+MK   V+ESW 
Sbjct: 261  LTDEQFREVSKPDCGG--LNRCNYHLVVLRGCLSAA-VYCNYGRLEIWVMKEYNVKESWV 317

Query: 261  KQYVL--------------------LMEDFKYINLLCLLKSGEILFLYNGAKLVSYDPRN 142
            K+Y +                       + + +  LC+LK+GEIL  Y    LVSYDP+N
Sbjct: 318  KEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYDPKN 377

Query: 141  GQIREVGVSSVSHNADYLIERFVFVGTL 58
            G+ +++ +      A    +  V VG+L
Sbjct: 378  GKFKDIEL----QGAPNWFQTVVHVGSL 401


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  147 bits (370), Expect = 7e-33
 Identities = 121/368 (32%), Positives = 178/368 (48%), Gaps = 35/368 (9%)
 Frame = -1

Query: 1122 PDEISISILSWLHIRYLMRCRCVSRNWRLLISDPIFVDMHLNNQRLLQLNDMVDTDLVVI 943
            P EI+  ILS L I  L++ +CV R WR +  DP  V+++L+           +TD  VI
Sbjct: 29   PREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQ-------ETDPCVI 81

Query: 942  VRETFLPV--NFYMLENIGCTNES--VKPFPVP-PSHLTKCKVVNSCNGLLCLRGITMLN 778
            +   F P+  N Y ++      E   VK    P  S + + +VV SCNGLLCL   ++ N
Sbjct: 82   LHCDF-PIRNNLYFVDFAAHEEEKEKVKRIRAPFSSMMPEFEVVGSCNGLLCLSD-SLFN 139

Query: 777  QLIYIWNPFTGEILDIPLS---PDLMEVRIFCFGYDSTSNVYKVVVISY-----PGIPLL 622
              +YI+NPFTG   ++P S   PD  EV +F FG++  +N YKV+ I Y        P  
Sbjct: 140  DSLYIYNPFTGRYKELPKSLQYPD-QEV-VFGFGFNPKTNEYKVIRIVYYRNGHGRYPRS 197

Query: 621  DDDTEFLVVAEVWTLGSGSWRKIEKVPFLPVNQ--QFSMEGSLYWKSYESYESDVVGIGS 448
                  L   ++ TLG   WR + KV +  V +  +  + G L+W S          + S
Sbjct: 198  RRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRRASETLVNGRLHWVSRPCRNKPARRLVS 257

Query: 447  FHVRTEEFQFVSLPPSFNSVLNTGYVDIGALGGCIALVDYYASPGHAEIWIMKHLGVQES 268
            F +  E+F+ V  P      LN     +  L GC++ V  Y + G  EIW+MK   V+ES
Sbjct: 258  FDLTDEQFREVPKPDCGG--LNRCDYHLAVLRGCLS-VAVYCNYGRLEIWVMKEYNVKES 314

Query: 267  WTKQYVL-----------LMEDFKY---------INLLCLLKSGEILFLYNGAKLVSYDP 148
            W K+Y +           L+   K          +  LC+LK+GEIL  Y    LVSYDP
Sbjct: 315  WVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLEYKNRALVSYDP 374

Query: 147  RNGQIREV 124
            + G+ +++
Sbjct: 375  KKGKFKDI 382


>ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|222860057|gb|EEE97604.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  146 bits (369), Expect = 9e-33
 Identities = 111/354 (31%), Positives = 177/354 (50%), Gaps = 22/354 (6%)
 Frame = -1

Query: 1122 PDEISISILSWLHIRYLMRCRCVSRNWRLLISDPIFVDMHLNNQRLLQL--------NDM 967
            P+ + I ILS L IR L+ C+ V + W  L+SDP FV +HL       L         + 
Sbjct: 40   PNALIIDILSRLPIRPLLNCKSVCKTWLHLMSDPSFVRLHLERSPTTLLIQKTPFERKES 99

Query: 966  VDTDLVVIVRETFLPVNFYMLENIGCTNESVKPFPVPPSHLTKCKVVNSCNGLLCLRGIT 787
             +  LV IV E  +   FY+        E ++ FP      T  +++NSCNGLLCL   +
Sbjct: 100  TEMLLVEIVEED-ISKPFYI--------EIIRLFPTKNFPDTDVRILNSCNGLLCLYEDS 150

Query: 786  --MLNQLIYIWNPFTGEILDIP-LSPDLMEVRIFCFGYDSTSNVYKVVVISYPGIPLLDD 616
                + ++++ NP  GE +DIP ++ D        FG+ S SN YKV+   YP      D
Sbjct: 151  GDKSDMMVHVCNPVLGEYIDIPVVNTDKKFEHHLAFGFSSVSNQYKVLQTFYPE----KD 206

Query: 615  DTEFLVVAEVWTLGSGSWRKIEKVPF--LPVNQQFSMEGSLYWKSYESYESDVVGIGSFH 442
             T    +AE++T+G+G WR I    F    ++    +  S++W  Y S  + +  + +F 
Sbjct: 207  LTAAPCLAEIYTVGTGQWRSIGNASFRLQSLDANAFLHDSIHWIEYRS--NSIGFVSAFD 264

Query: 441  VRTEEFQFVSLPPSFNSVLNTGY-----VDIGALGGCIALVDYYASPGHA-EIWIMKHLG 280
              +E+F+ V+LPP+  S ++ G        +G + GC+ + +         EIW+M+  G
Sbjct: 265  FVSEQFKLVALPPA--SQIHDGMGRCYPSSVGVIKGCLFMTNGVCIENEKFEIWVMEEYG 322

Query: 279  VQESWTKQYVLL-MEDFKYINL--LCLLKSGEILFLYNGAKLVSYDPRNGQIRE 127
            ++ESWTK++VL  +E   Y++   L  L SGEIL   +   +  Y P+  +I E
Sbjct: 323  IKESWTKKFVLSNLEVQHYVSYQPLYFLSSGEILICEDDESIGVYVPKLERIHE 376


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  132 bits (332), Expect = 2e-28
 Identities = 116/387 (29%), Positives = 182/387 (47%), Gaps = 32/387 (8%)
 Frame = -1

Query: 1122 PDEISISILSWLHIRYLMRCRCVSRNWRLLISDPIFVDMHLNNQRLLQLNDMVDTDLVVI 943
            P +I + ILS L +  L++ R V R WRL+  D +    HL   R  Q N  +       
Sbjct: 31   PRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLC--RTAQYNPCLILHCDYP 88

Query: 942  VRETFLPVNFYMLENIGCTNESVKPFPVPP-SHLTKCKVVNSCNGLLCLRGITMLNQLIY 766
            +R     ++F  +       + V+   +P  + + + +VV SCNGLLCL   ++    +Y
Sbjct: 89   IRNQ---ISFVDISAESRDKDMVRKLTIPFWASMPEFEVVGSCNGLLCLAD-SLFKDAVY 144

Query: 765  IWNPFTGEILDIPLS---PDLMEVRIFCFGYDSTSNVYKVVVI-----SYPGIPLLDDDT 610
            + NPFT +   +P S   PD  EV +F FGY   + VYKVV +      Y G       T
Sbjct: 145  VHNPFTRDFKQLPKSLQYPD-QEV-VFGFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRIT 202

Query: 609  EFLVVAEVWTLGSGSWRKIEKVPFLPVN--QQFSMEGSLYWKSY-ESYESDVVGIGSFHV 439
                  +V TLGS +WR + KV +       +  + G L+W +    Y +    I SF +
Sbjct: 203  CSQSEVQVLTLGSPTWRSLGKVSYQLDRWPSEALVNGRLHWVTRPRRYVTRF--IVSFDL 260

Query: 438  RTEEFQFVSLPPSFNSVLNTGYVDIGALGGCIALVDYYASPGHAEIWIMKHLGVQESWTK 259
              E+F+ +  P      L+     +  LGGC++    + S G  E+W+MK   V+ESW K
Sbjct: 261  ADEQFREIPKPDCGG--LSRCNYHLLVLGGCLSAA-VHRSNGKLEVWVMKEYDVKESWIK 317

Query: 258  QYVL-------LMEDF-------------KYINLLCLLKSGEILFLYNGAKLVSYDPRNG 139
            ++ +       L +D              + + LLCLLK+GEIL  Y G  LVSY+P  G
Sbjct: 318  EFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLCLLKNGEILLEYKGRVLVSYNPERG 377

Query: 138  QIREVGVSSVSHNADYLIERFVFVGTL 58
            + +++ +  + +      + FV VG+L
Sbjct: 378  KFKDLTLKGLPN----WFQTFVHVGSL 400


>ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  129 bits (323), Expect = 2e-27
 Identities = 102/342 (29%), Positives = 161/342 (47%), Gaps = 16/342 (4%)
 Frame = -1

Query: 1122 PDEISISILSWLHIRYLMRCRCVSRNWRLLISDPIFVDMHLNNQ----RLLQLNDMVDTD 955
            P  + + ILS L I+ ++ CRCV + W   ISD  F  +HL        +  +++  ++ 
Sbjct: 29   PSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLLVKTISNNPESR 88

Query: 954  LVVIVRETFLPV--NFYMLENIGCTNESVKPFPVPPSHLTKCKVVNSCNGLLCLRGITM- 784
             V +V+ T  PV   F ++E +    E   P+           + NSCNGLLC+      
Sbjct: 89   SVQLVQITGKPVGLRFRVVEEMKFVQEINLPYN------NDFLIENSCNGLLCISKTFQD 142

Query: 783  -LNQLIYIWNPFTGEILDIPLS--PDLMEVRIFCFGYDSTSNVYKVVVISYPGIPLLDDD 613
              +  IY+ NP  GE + IPL+        R F  GY + +  YKV+   Y         
Sbjct: 143  GSHDDIYLCNPILGEYISIPLAAGQGTRHKRSFSLGYSAITKEYKVLHTFYS-----KKG 197

Query: 612  TEFLVVAEVWTLGSGSWRKIEKVPFLPVNQQFSME----GSLYWKSYESYESDVVGIGSF 445
             +    AE++T+G+G WR I K   L +   F  +    GS++W+     ++ V  IGSF
Sbjct: 198  PDSQPEAEIYTIGTGKWRSIHKA--LHILDIFMFDSFVCGSIHWE-LRGEDNCVNSIGSF 254

Query: 444  HVRTEEFQFVSLPPSFNSVLNTGYVDIGALGGCIALVDY-YASPGHAEIWIMKHLGVQES 268
            +   E+F  +SLPP ++     G V +    GC+ +  +        EIW+MK  G ++S
Sbjct: 255  NFENEQFSQLSLPPRYDE----GGVTLTVFEGCLGVSFFNTCCETQFEIWVMKEYGNKQS 310

Query: 267  WTKQYVLLMEDFK-YINLLCLLKSGEILFLYNGAKLVSYDPR 145
            WTKQ+ +    F+ +   L  L +G IL + N  + V YD R
Sbjct: 311  WTKQFTVKNLGFENHYQPLIFLNNGLILMMDNHERFVIYDTR 352