BLASTX nr result
ID: Coptis25_contig00021600
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021600 (532 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19201.3| unnamed protein product [Vitis vinifera] 155 5e-36 ref|XP_002285745.1| PREDICTED: 39S ribosomal protein L41-A, mito... 155 5e-36 ref|XP_002308991.1| predicted protein [Populus trichocarpa] gi|2... 154 8e-36 ref|XP_004135839.1| PREDICTED: 39S ribosomal protein L41-A, mito... 149 3e-34 gb|AFK44300.1| unknown [Lotus japonicus] 147 7e-34 >emb|CBI19201.3| unnamed protein product [Vitis vinifera] Length = 175 Score = 155 bits (391), Expect = 5e-36 Identities = 73/83 (87%), Positives = 77/83 (92%) Frame = +1 Query: 100 MPLGIIQGIGRAMRRKRTSSLSILSPKRAPRDYYKGKNCIPTGFHTRKGGYVLVQEKLPN 279 M LG+I GIGRA RRKRTSSL ILS KRAPRDYYKGKNC PTGFHTRKGGYVL+QEKLPN Sbjct: 79 MALGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLMQEKLPN 138 Query: 280 YVVPDLTDFKLKPYVSQCPKEMK 348 YVVPDLTDFKLKPYVSQCP+E+K Sbjct: 139 YVVPDLTDFKLKPYVSQCPREVK 161 >ref|XP_002285745.1| PREDICTED: 39S ribosomal protein L41-A, mitochondrial [Vitis vinifera] gi|147843318|emb|CAN82662.1| hypothetical protein VITISV_004928 [Vitis vinifera] Length = 97 Score = 155 bits (391), Expect = 5e-36 Identities = 73/83 (87%), Positives = 77/83 (92%) Frame = +1 Query: 100 MPLGIIQGIGRAMRRKRTSSLSILSPKRAPRDYYKGKNCIPTGFHTRKGGYVLVQEKLPN 279 M LG+I GIGRA RRKRTSSL ILS KRAPRDYYKGKNC PTGFHTRKGGYVL+QEKLPN Sbjct: 1 MALGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLMQEKLPN 60 Query: 280 YVVPDLTDFKLKPYVSQCPKEMK 348 YVVPDLTDFKLKPYVSQCP+E+K Sbjct: 61 YVVPDLTDFKLKPYVSQCPREVK 83 >ref|XP_002308991.1| predicted protein [Populus trichocarpa] gi|222854967|gb|EEE92514.1| predicted protein [Populus trichocarpa] Length = 92 Score = 154 bits (389), Expect = 8e-36 Identities = 73/83 (87%), Positives = 76/83 (91%) Frame = +1 Query: 100 MPLGIIQGIGRAMRRKRTSSLSILSPKRAPRDYYKGKNCIPTGFHTRKGGYVLVQEKLPN 279 MPLG+I GIGRAMRRKRTSSL ILS KRAPR YYKGKNC PTGFHTRKGGYV+V EKLPN Sbjct: 1 MPLGLITGIGRAMRRKRTSSLDILSSKRAPRTYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60 Query: 280 YVVPDLTDFKLKPYVSQCPKEMK 348 YVVPDLTDFKLKPYVSQCP E+K Sbjct: 61 YVVPDLTDFKLKPYVSQCPTEVK 83 >ref|XP_004135839.1| PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis sativus] gi|449490988|ref|XP_004158767.1| PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis sativus] Length = 93 Score = 149 bits (376), Expect = 3e-34 Identities = 70/83 (84%), Positives = 75/83 (90%) Frame = +1 Query: 100 MPLGIIQGIGRAMRRKRTSSLSILSPKRAPRDYYKGKNCIPTGFHTRKGGYVLVQEKLPN 279 M LG+I G+GR MRRKRTSSL ILS KRAPRDYYKGKNC PTGFHTRKGGYV+V EKLPN Sbjct: 1 MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60 Query: 280 YVVPDLTDFKLKPYVSQCPKEMK 348 YVVPDL+DFKLKPYVSQCP E+K Sbjct: 61 YVVPDLSDFKLKPYVSQCPIELK 83 >gb|AFK44300.1| unknown [Lotus japonicus] Length = 92 Score = 147 bits (372), Expect = 7e-34 Identities = 69/82 (84%), Positives = 74/82 (90%) Frame = +1 Query: 100 MPLGIIQGIGRAMRRKRTSSLSILSPKRAPRDYYKGKNCIPTGFHTRKGGYVLVQEKLPN 279 MPLG+I GIG A RRKRTSSL IL+ KRAPRDYYKGKNC PTGFHTRKGGYV+V EKLP Sbjct: 1 MPLGLILGIGGAFRRKRTSSLDILTSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPK 60 Query: 280 YVVPDLTDFKLKPYVSQCPKEM 345 YVVPDLTDFKLKPYVSQCP+E+ Sbjct: 61 YVVPDLTDFKLKPYVSQCPREV 82