BLASTX nr result

ID: Coptis25_contig00021587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021587
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002975325.1| hypothetical protein SELMODRAFT_103116 [Sela...    67   1e-09
ref|XP_002964471.1| hypothetical protein SELMODRAFT_81932 [Selag...    66   3e-09
ref|XP_001777837.1| predicted protein [Physcomitrella patens sub...    65   6e-09
ref|XP_002306749.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002334742.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002975325.1| hypothetical protein SELMODRAFT_103116 [Selaginella moellendorffii]
           gi|300156899|gb|EFJ23526.1| hypothetical protein
           SELMODRAFT_103116 [Selaginella moellendorffii]
          Length = 378

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = -1

Query: 234 VKMKLSIKDEFTVKFVAEEEDDLWSIYNLICKGDRVEAETSRKMD-SNGIRKTSATRVKV 58
           VK +++     +VK V EE+DDLW+ YNLI K D+V A T RK+   N      A RV++
Sbjct: 4   VKKRIAADGSGSVKLVPEEDDDLWNAYNLIAKDDQVSAVTMRKVQRENSSGGRDAERVRL 63

Query: 57  KVEIKVAKTEYDKVGSVL 4
           K+E+ V  TE+D + SVL
Sbjct: 64  KLEVLVEATEFDNIASVL 81


>ref|XP_002964471.1| hypothetical protein SELMODRAFT_81932 [Selaginella moellendorffii]
           gi|300168200|gb|EFJ34804.1| hypothetical protein
           SELMODRAFT_81932 [Selaginella moellendorffii]
          Length = 378

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = -1

Query: 234 VKMKLSIKDEFTVKFVAEEEDDLWSIYNLICKGDRVEAETSRKMD-SNGIRKTSATRVKV 58
           +K +++     +VK V EE+DDLW+ YNLI K D+V A T RK+   N      A RV++
Sbjct: 4   LKKRIAADGSGSVKLVPEEDDDLWNAYNLIAKDDQVSAVTMRKVQRENSSGGRDAERVRL 63

Query: 57  KVEIKVAKTEYDKVGSVL 4
           K+E+ V  TE+D + SVL
Sbjct: 64  KLEVLVEATEFDNIASVL 81


>ref|XP_001777837.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162670813|gb|EDQ57375.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 378

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -1

Query: 201 TVKFVAEEEDDLWSIYNLICKGDRVEAETSRK-MDSNGIRKTSATRVKVKVEIKVAKTEY 25
           +VK V EE +D+W +YNL+ KGDRV   T RK M         A RV++K+E++V   EY
Sbjct: 15  SVKLVPEEPEDMWHVYNLVAKGDRVSGVTVRKVMRETASGAGEAERVRLKLEVEVETVEY 74

Query: 24  DKVGSVL 4
           DKV SVL
Sbjct: 75  DKVASVL 81


>ref|XP_002306749.1| predicted protein [Populus trichocarpa] gi|222856198|gb|EEE93745.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/66 (53%), Positives = 41/66 (62%)
 Frame = -1

Query: 201 TVKFVAEEEDDLWSIYNLICKGDRVEAETSRKMDSNGIRKTSATRVKVKVEIKVAKTEYD 22
           +VK    + DDLW +YNLI  GD V A T RK+         A RVK+K+EIKV   EYD
Sbjct: 15  SVKMTPVDADDLWFVYNLIAHGDSVMAVTVRKVLRETSTGRDAERVKLKLEIKVEAIEYD 74

Query: 21  KVGSVL 4
           KVGSVL
Sbjct: 75  KVGSVL 80


>ref|XP_002334742.1| predicted protein [Populus trichocarpa] gi|222874423|gb|EEF11554.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/66 (53%), Positives = 41/66 (62%)
 Frame = -1

Query: 201 TVKFVAEEEDDLWSIYNLICKGDRVEAETSRKMDSNGIRKTSATRVKVKVEIKVAKTEYD 22
           +VK    + DDLW +YNLI  GD V A T RK+         A RVK+K+EIKV   EYD
Sbjct: 15  SVKMTPIDADDLWFVYNLIAHGDSVMAVTVRKVLRETSTGRDAERVKLKLEIKVEAIEYD 74

Query: 21  KVGSVL 4
           KVGSVL
Sbjct: 75  KVGSVL 80


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