BLASTX nr result

ID: Coptis25_contig00021582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021582
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264927.2| PREDICTED: E3 ubiquitin-protein ligase PUB23...   202   3e-50
ref|XP_002264761.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   197   6e-49
ref|XP_004155855.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   184   5e-45
ref|XP_004134357.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   184   5e-45
ref|XP_004160699.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   154   7e-36

>ref|XP_002264927.2| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 413

 Score =  202 bits (513), Expect = 3e-50
 Identities = 100/145 (68%), Positives = 125/145 (86%)
 Frame = +2

Query: 8   DEINNKASSCALDALIEILRASKKNRLKVIEAGAMCVLIELLVDSAKSKCERMLLIIKLL 187
           D+I  KAS+ AL+ LIEIL +SK +RLKVIEAGA+C+LIELL DS +SKCE+MLL++KLL
Sbjct: 242 DQICTKASASALELLIEILGSSKTSRLKVIEAGAVCILIELLPDSNRSKCEKMLLLLKLL 301

Query: 188 CECAEGRLAIVDHSLGIVAISKKILRVSELATKLGIKIIWLITNFHPTEKVLEEMLMSGS 367
           CECAEGRLA+V+H LGI AISKK+L VS  ATK+ +KI+WLI ++HP+E+VLEE+L+ GS
Sbjct: 302 CECAEGRLALVEHGLGIAAISKKLLHVSSAATKITVKILWLICSYHPSERVLEELLIFGS 361

Query: 368 VKKLLGLLHIDGRSSTKDKAMKIIK 442
           VKKLL LLHID RSSTK+K +KI K
Sbjct: 362 VKKLLALLHIDNRSSTKEKVVKIFK 386


>ref|XP_002264761.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 411

 Score =  197 bits (502), Expect = 6e-49
 Identities = 98/145 (67%), Positives = 124/145 (85%)
 Frame = +2

Query: 8   DEINNKASSCALDALIEILRASKKNRLKVIEAGAMCVLIELLVDSAKSKCERMLLIIKLL 187
           D+I  KAS+ AL+ LIEIL +SKK+RLK IEAGA+C+LIELL DS +SKCE+MLL++KLL
Sbjct: 240 DQICTKASASALELLIEILGSSKKSRLKAIEAGAVCILIELLPDSNRSKCEKMLLLLKLL 299

Query: 188 CECAEGRLAIVDHSLGIVAISKKILRVSELATKLGIKIIWLITNFHPTEKVLEEMLMSGS 367
           CECAEGRLA+V+H LGI AISKK+L VS  +TK+ +KI+WLI ++HP+E+VLEEML+ GS
Sbjct: 300 CECAEGRLALVEHGLGIAAISKKLLHVSSASTKITVKILWLICSYHPSERVLEEMLILGS 359

Query: 368 VKKLLGLLHIDGRSSTKDKAMKIIK 442
           VKKLL LLHI  RSSTK+K +KI +
Sbjct: 360 VKKLLVLLHIGNRSSTKEKVVKIFR 384


>ref|XP_004155855.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 365

 Score =  184 bits (468), Expect = 5e-45
 Identities = 92/154 (59%), Positives = 125/154 (81%), Gaps = 7/154 (4%)
 Frame = +2

Query: 2   LSDEINNKASSCALDALIEILRASKKNRLKVIEAGAMCVLIELLVDSAKSKCERMLLIIK 181
           +SDE   KASSCALD +IEIL +SK++R+K IEAGA+ +LIELL +S +SKCERML I++
Sbjct: 186 VSDEFPTKASSCALDVMIEILSSSKRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQ 245

Query: 182 LLCECAEGRLAIVDHSLGIVAISKKILRVSELATKLGIKIIWLITNFHPTEKVLEEMLMS 361
            LCECAEGRLA+V+H +GI A++KKIL VS +ATK+G+KI+  I++FHP E+V++EM+  
Sbjct: 246 SLCECAEGRLALVEHGMGIAAVTKKILNVSYVATKIGVKILLWISSFHPRERVVDEMMAC 305

Query: 362 GSVKKLLGLLHID-------GRSSTKDKAMKIIK 442
           G+VKKLL +LH+D       GRSSTK+K +KI+K
Sbjct: 306 GAVKKLLMILHMDSAGVGDGGRSSTKEKVIKILK 339


>ref|XP_004134357.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 415

 Score =  184 bits (468), Expect = 5e-45
 Identities = 92/154 (59%), Positives = 125/154 (81%), Gaps = 7/154 (4%)
 Frame = +2

Query: 2   LSDEINNKASSCALDALIEILRASKKNRLKVIEAGAMCVLIELLVDSAKSKCERMLLIIK 181
           +SDE   KASSCALD +IEIL +SK++R+K IEAGA+ +LIELL +S +SKCERML I++
Sbjct: 236 VSDEFPTKASSCALDVMIEILSSSKRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQ 295

Query: 182 LLCECAEGRLAIVDHSLGIVAISKKILRVSELATKLGIKIIWLITNFHPTEKVLEEMLMS 361
            LCECAEGRLA+V+H +GI A++KKIL VS +ATK+G+KI+  I++FHP E+V++EM+  
Sbjct: 296 SLCECAEGRLALVEHGMGIAAVTKKILNVSYVATKIGVKILLWISSFHPRERVVDEMMAC 355

Query: 362 GSVKKLLGLLHID-------GRSSTKDKAMKIIK 442
           G+VKKLL +LH+D       GRSSTK+K +KI+K
Sbjct: 356 GAVKKLLMILHMDSTGVGDGGRSSTKEKVIKILK 389


>ref|XP_004160699.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 152

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/128 (60%), Positives = 107/128 (83%), Gaps = 1/128 (0%)
 Frame = +2

Query: 62  LRASKKNRLKVIEAGAMCVLIELLVDSAKSKCERMLLIIKLLCECAEGRLAIVDHSLGIV 241
           + +SKK+RL  IEAGA+CV+I+LL DS +SKCE++L I+KLL ECAEGR A+ +H +GI 
Sbjct: 1   MESSKKSRLLSIEAGAVCVMIDLLPDSNRSKCEKILHILKLLSECAEGRSAMGEHIMGIA 60

Query: 242 AISKKILRVSELATKLGIKIIWLITNFHPTEKVLEEMLMSGSVKKLLGLLHI-DGRSSTK 418
            ++KK + +S  ATK+G+KI+WLI N+HP+E+VLEEM+  G+VKKLLG+L+  DGRSSTK
Sbjct: 61  TVTKK-MSISNTATKIGMKILWLICNYHPSERVLEEMMGCGTVKKLLGILNNGDGRSSTK 119

Query: 419 DKAMKIIK 442
           +KAMK++K
Sbjct: 120 EKAMKVMK 127


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