BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021570
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containi...   132   4e-29
emb|CBI15662.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]   129   2e-28

>ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|222869246|gb|EEF06377.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/104 (60%), Positives = 81/104 (77%), Gaps = 4/104 (3%)
 Frame = -2

Query: 301 NMYGKCG----AQLAFDEMPEKALVGWNTLISGYLHNGYIEKALNLHCEMQDLGVKMDPV 134
           +MY KCG    A+  F+EMPEK  VGWNT+I+GY  +GY E+AL+++ EM+D GVKMD  
Sbjct: 119 DMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHF 178

Query: 133 TYSTIISLCTRLASVERVKQAHAGLVRNGFGSDLESNTALVDFY 2
           T+S I+ +C RLASVE  KQAHA L+R+GFGSD+ +NTALVDFY
Sbjct: 179 TFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFY 222



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
 Frame = -2

Query: 298 MYGKCG----AQLAFDEMPEKALVGWNTLISGYLHNGYIEKALNLHCEMQDLGVKMDPVT 131
           M+ KCG    A+  FDEMPE+ LV WNT+ISG +  G   +A  L   M +        T
Sbjct: 19  MHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFT 78

Query: 130 YSTIISLCTRLASVERVKQAHAGLVRNGFGSDLESNTALVDFY 2
           ++ +I     L  +   +Q HA  ++ G G D+  + AL+D Y
Sbjct: 79  FAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMY 121


>ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
           gi|449517215|ref|XP_004165641.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/104 (61%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
 Frame = -2

Query: 301 NMYGKCG----AQLAFDEMPEKALVGWNTLISGYLHNGYIEKALNLHCEMQDLGVKMDPV 134
           +MY KCG    A   FDEMP+K +VGWN++I+GY  +GY E+AL+L+ EM+D GVKMD  
Sbjct: 276 DMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHF 335

Query: 133 TYSTIISLCTRLASVERVKQAHAGLVRNGFGSDLESNTALVDFY 2
           T+S II +C+RLASV R KQ HA LVRNGFG D+ +NTALVDFY
Sbjct: 336 TFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFY 379



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
 Frame = -2

Query: 298 MYGKCGAQL----AFDEMPEKALVGWNTLISGYLHNGYIEKALNLHCEMQDLGVKMDPVT 131
           M+ KCG  +     FDEMP +  V W T+ISGY+ +G   +A  L   M++      P T
Sbjct: 176 MHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRT 235

Query: 130 YSTIISLCTRLASVERVKQAHAGLVRNGFGSDLESNTALVDFY 2
           ++T+I     L  +   +Q H+  ++ G G D+  + AL+D Y
Sbjct: 236 FATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMY 278


>emb|CBI15662.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/104 (59%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
 Frame = -2

Query: 301 NMYGKCG----AQLAFDEMPEKALVGWNTLISGYLHNGYIEKALNLHCEMQDLGVKMDPV 134
           +MY KCG    AQ  FD+MPEK  VGWN++I+GY  +GY E+AL+++ EM+D GVK+D  
Sbjct: 275 DMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNF 334

Query: 133 TYSTIISLCTRLASVERVKQAHAGLVRNGFGSDLESNTALVDFY 2
           T+S II +C RLAS+E  KQAHAGLVR+GFG D+ +NTALVD Y
Sbjct: 335 TFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLY 378


>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/104 (59%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
 Frame = -2

Query: 301 NMYGKCG----AQLAFDEMPEKALVGWNTLISGYLHNGYIEKALNLHCEMQDLGVKMDPV 134
           +MY KCG    AQ  FD+MPEK  VGWN++I+GY  +GY E+AL+++ EM+D GVK+D  
Sbjct: 275 DMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNF 334

Query: 133 TYSTIISLCTRLASVERVKQAHAGLVRNGFGSDLESNTALVDFY 2
           T+S II +C RLAS+E  KQAHAGLVR+GFG D+ +NTALVD Y
Sbjct: 335 TFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLY 378


>emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/104 (59%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
 Frame = -2

Query: 301 NMYGKCG----AQLAFDEMPEKALVGWNTLISGYLHNGYIEKALNLHCEMQDLGVKMDPV 134
           +MY KCG    AQ  FD+MPEK  VGWN++I+GY  +GY E+AL+++ EM+D GVK+D  
Sbjct: 275 DMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNF 334

Query: 133 TYSTIISLCTRLASVERVKQAHAGLVRNGFGSDLESNTALVDFY 2
           T+S II +C RLAS+E  KQAHAGLVR+GFG D+ +NTALVD Y
Sbjct: 335 TFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLY 378