BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021569
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511191.1| pentatricopeptide repeat-containing protein,...   132   2e-29
emb|CBI15662.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]   127   7e-28
ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26

>ref|XP_002511191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550306|gb|EEF51793.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 538

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/96 (64%), Positives = 76/96 (79%)
 Frame = +3

Query: 3   KRLFDEMPVRNVVSWNIIIGGLVDCGDYEVAFDLFFILWRECGDAGTRMFNTVIKACAGL 182
           ++ FDEMP RN+VSWN II GLVD GDY+ AF LF I+W E  DAG+R F T+I+A AGL
Sbjct: 225 RKWFDEMPERNLVSWNTIISGLVDMGDYKEAFRLFLIMWEEFSDAGSRTFATMIQASAGL 284

Query: 183 GRGNVGRQLHSNALKMGINEDVFVSCGLINMYGKCG 290
           G  ++GRQLHS ALKM + +D+FVSC LI+MYGKCG
Sbjct: 285 GWISIGRQLHSCALKMEVGDDIFVSCALIDMYGKCG 320



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
 Frame = +3

Query: 9   LFDEMPVRNVVSWNIIIGGLVDCGDYEVAFDLFFILWRECGDAGTRM----FNTVIKACA 176
           +FDEMP RN+V+WN II G    G  E A D+ +    E  ++G RM    F+ V++ CA
Sbjct: 328 VFDEMPERNIVAWNTIIAGYALHGYSEEALDMVY----EMRNSGVRMDHFTFSIVVRICA 383

Query: 177 GLGRGNVGRQLHSNALKMGINEDVFVSCGLINMYGKCG 290
            L   N  +Q H++ L+ G   D+  +  L++ Y K G
Sbjct: 384 RLASLNYAKQAHASLLRHGFGSDIVANSALVDFYSKWG 421


>emb|CBI15662.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/96 (62%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   KRLFDEMPVRNVVSWNIIIGGLVDCGDYEVAFDLFFILWRECGDAGTRMFNTVIKACAGL 182
           +RLFDEMP +N++SWN IIGGLVD GDY  AF LF ++W++  DAG+RMF T+I+A AGL
Sbjct: 186 RRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGL 245

Query: 183 GRGNVGRQLHSNALKMGINEDVFVSCGLINMYGKCG 290
           G    GRQLHS +LK G+  DVFV+C LI+MY KCG
Sbjct: 246 GLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCG 281


>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/96 (62%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   KRLFDEMPVRNVVSWNIIIGGLVDCGDYEVAFDLFFILWRECGDAGTRMFNTVIKACAGL 182
           +RLFDEMP +N++SWN IIGGLVD GDY  AF LF ++W++  DAG+RMF T+I+A AGL
Sbjct: 186 RRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGL 245

Query: 183 GRGNVGRQLHSNALKMGINEDVFVSCGLINMYGKCG 290
           G    GRQLHS +LK G+  DVFV+C LI+MY KCG
Sbjct: 246 GLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCG 281


>emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/96 (62%), Positives = 74/96 (77%)
 Frame = +3

Query: 3   KRLFDEMPVRNVVSWNIIIGGLVDCGDYEVAFDLFFILWRECGDAGTRMFNTVIKACAGL 182
           +RLFDEMP +N++SWN IIGGLVD GDY  AF LF ++W+   DAG+RMF T+I+A AGL
Sbjct: 186 RRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGL 245

Query: 183 GRGNVGRQLHSNALKMGINEDVFVSCGLINMYGKCG 290
           G    GRQLHS +LK G+  DVFV+C LI+MY KCG
Sbjct: 246 GLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCG 281


>ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|222869246|gb|EEF06377.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/96 (60%), Positives = 71/96 (73%)
 Frame = +3

Query: 3   KRLFDEMPVRNVVSWNIIIGGLVDCGDYEVAFDLFFILWRECGDAGTRMFNTVIKACAGL 182
           +RLFDEMP RN+VSWN II GLVD GD+  AF LF  +W E  DAG+  F  +I+A AGL
Sbjct: 30  RRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAGL 89

Query: 183 GRGNVGRQLHSNALKMGINEDVFVSCGLINMYGKCG 290
              ++GRQLH+  LKMGI +D+FVSC LI+MY KCG
Sbjct: 90  ELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCG 125



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
 Frame = +3

Query: 9   LFDEMPVRNVVSWNIIIGGLVDCGDYEVAFDLFFILWRECGDAGTRM----FNTVIKACA 176
           +F+EMP +  V WN II G    G  E A D+++    E  D+G +M    F+ +++ CA
Sbjct: 133 VFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYY----EMRDSGVKMDHFTFSMIVRICA 188

Query: 177 GLGRGNVGRQLHSNALKMGINEDVFVSCGLINMYGKCG 290
            L      +Q H+  ++ G   D+  +  L++ Y K G
Sbjct: 189 RLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWG 226