BLASTX nr result
ID: Coptis25_contig00021536
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00021536
(1244 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285464.1| PREDICTED: uncharacterized protein LOC100243... 382 e-103
ref|XP_002524515.1| polynucleotide kinase- 3'-phosphatase, putat... 367 3e-99
ref|XP_004165414.1| PREDICTED: polynucleotide 3'-phosphatase ZDP... 363 6e-98
ref|XP_004146024.1| PREDICTED: polynucleotide 3'-phosphatase ZDP... 362 1e-97
gb|AFK35881.1| unknown [Lotus japonicus] 350 6e-94
>ref|XP_002285464.1| PREDICTED: uncharacterized protein LOC100243613 [Vitis vinifera]
gi|302142893|emb|CBI20188.3| unnamed protein product
[Vitis vinifera]
Length = 354
Score = 382 bits (980), Expect = e-103
Identities = 198/346 (57%), Positives = 246/346 (71%), Gaps = 40/346 (11%)
Frame = +2
Query: 173 KIIAEYAXXXXXXXXXXXXAIPSKTLRLGLVNRGERGFDMTKWHHLNCFPS---SLNSVE 343
K++ EYA I + +RLGLV RG RGFDMTKWHH++CF + S++S E
Sbjct: 8 KVVVEYAKSNRSSCKTCSKTISANAVRLGLVTRGARGFDMTKWHHVHCFSAGSESISSAE 67
Query: 344 NITGFSLLNSTDQESLIN----FAKS------------------------PKRKAEEIEG 439
I GF+ L S+DQE+L FAKS ++ E+ +
Sbjct: 68 MIQGFASLKSSDQEALKKLVDGFAKSLDEVLDEGKDLTEGSKELICEELGVHKRDEDEKD 127
Query: 440 ENDEISGKKTK----GVEIEIEIVFSDSDVKNEYKGITLMNKWKAFETVIFLERDEGLVD 607
+ +E KKTK ++ E EI F+ S++K++YK TL+ KWKAF+TVIFLERD+ L D
Sbjct: 128 KREERDSKKTKMSAPALKAEQEIAFAVSNIKDKYKDATLLPKWKAFQTVIFLERDDDLHD 187
Query: 608 SKKIAAFDFDGCLANTNVKRVGENAWSLMYGCIPDKLKSLHEDGYKVVIFTNESNIDRWK 787
SKKIAAFDFDGCLA T+VKRVG +AWSLMY IPDKL+SL+ DGYK+VIFTNESNI+RWK
Sbjct: 188 SKKIAAFDFDGCLAKTSVKRVGPDAWSLMYPSIPDKLQSLYNDGYKLVIFTNESNIERWK 247
Query: 788 NKRKVAIDSKVGRLNNFIKCVGVPVQVFIACGYG-----GEDRYRKPKTGMWRLMEKHLN 952
NKR+VA+DSK+GRLNNFIKCV VP+QVFI+CG+ ED +RKPK GMWR+ME+H N
Sbjct: 248 NKRQVAVDSKIGRLNNFIKCVKVPIQVFISCGFDKSDGQAEDPFRKPKPGMWRIMEQHFN 307
Query: 953 SGNEIDMDESFYVGDAAGRVGDHSDADIKFAEAIGLKFYVPEDYFE 1090
SG IDMD+SFYVGDAAGR+ DHSDADIKFA+AIGLKFYVPE+YF+
Sbjct: 308 SGISIDMDQSFYVGDAAGRLNDHSDADIKFAQAIGLKFYVPEEYFD 353
>ref|XP_002524515.1| polynucleotide kinase- 3'-phosphatase, putative [Ricinus communis]
gi|223536189|gb|EEF37842.1| polynucleotide kinase-
3'-phosphatase, putative [Ricinus communis]
Length = 332
Score = 367 bits (943), Expect = 3e-99
Identities = 185/324 (57%), Positives = 231/324 (71%), Gaps = 19/324 (5%)
Frame = +2
Query: 173 KIIAEYAXXXXXXXXXXXXAIPSKTLRLGLVNRGERGFDMTKWHHLNCFPSSLNSVENIT 352
KI+AEYA I +K LRLGLV + RGFDMTKWHHL+CF +++S + I
Sbjct: 7 KIVAEYAKSNRSTCKKCSTVISAKALRLGLVTKDSRGFDMTKWHHLDCFSITISSTDAIG 66
Query: 353 GFSLLNSTDQESLINFAK---------SPKRKAE---------EIEGENDEISGKKTKGV 478
GF+ L S DQ++L SP R ++ E+E N I+ T
Sbjct: 67 GFASLQSRDQDALKKLISKGGREVVEGSPNRGSKRTRANMEEIELEERNSMITKLSTATE 126
Query: 479 EIEIEIVFSDSDVKNEYKGITLMNKWKAFETVIFLERDEGLVDSKKIAAFDFDGCLANTN 658
E ++EI S D+K+ YK + L+ KWKAF+TVIFLE D+GL DS KIAAFDFDGCLA T+
Sbjct: 127 EAQLEIAVSQIDIKDTYKDVLLLPKWKAFQTVIFLEGDDGLHDSSKIAAFDFDGCLAQTS 186
Query: 659 VKRVGENAWSLMYGCIPDKLKSLHEDGYKVVIFTNESNIDRWKNKRKVAIDSKVGRLNNF 838
+KR+G +AWSLMY IP KL+ L++DGYK+VIFTNESNIDRWKNKR+VA+DSK+GRLNNF
Sbjct: 187 IKRIGADAWSLMYPSIPKKLQGLYKDGYKLVIFTNESNIDRWKNKRQVAVDSKIGRLNNF 246
Query: 839 IKCVGVPVQVFIACGYGG-EDRYRKPKTGMWRLMEKHLNSGNEIDMDESFYVGDAAGRVG 1015
I+ V VP+QVFIAC ED +RKPK GMW++ME+H NSG ID+D+SFYVGDAAGR
Sbjct: 247 IRRVKVPIQVFIACADSKVEDPFRKPKPGMWQIMERHFNSGISIDLDQSFYVGDAAGRNN 306
Query: 1016 DHSDADIKFAEAIGLKFYVPEDYF 1087
DHSDADI+FA+A+GLKF+VPEDYF
Sbjct: 307 DHSDADIRFAQAVGLKFFVPEDYF 330
>ref|XP_004165414.1| PREDICTED: polynucleotide 3'-phosphatase ZDP-like [Cucumis sativus]
Length = 387
Score = 363 bits (931), Expect = 6e-98
Identities = 195/370 (52%), Positives = 245/370 (66%), Gaps = 40/370 (10%)
Frame = +2
Query: 98 TTPRLHKTPYFYIQFLSQN-MXXXXXKIIAEYAXXXXXXXXXXXXAIPSKTLRLGLVNRG 274
T+P +H + +F FL + M KI+AEYA IP+ TLRLG V R
Sbjct: 16 TSPFIHFSSHFTPFFLHHSPMSSSSLKIVAEYAKSNRSTCKNCSKTIPASTLRLGFVTRD 75
Query: 275 ERGFDMTKWHHLNCF---PSSLNSVENITGFSLLNSTDQESLINF------AKSPKRKAE 427
RGFDMT+W H +C P ++S E+I GF+LL +DQE+L +K KR +
Sbjct: 76 GRGFDMTRWFHSDCASFGPRPVSSAEDINGFALLKDSDQEALRKMVCRSHESKVHKRDED 135
Query: 428 EIEG-----------------ENDEISGKKTKGVEI-------EIEIVFSDSDVKNEYKG 535
E +G E D + + K V++ +++IV + S++K +YK
Sbjct: 136 EEDGVEEGDQKKVKVHKKDGVEEDGVEERDQKNVKLSTSSLQPKLDIVLTASNIKTKYKD 195
Query: 536 ITLMNKWKAFETVIFLERDEGLVDSKKIAAFDFDGCLANTNVKRVGENAWSLMYGCIPDK 715
TL+ KWKAF+T+IFLE+D+GL S KIAAFDFDGCLANT+VKRVG AWSLMY IP K
Sbjct: 196 ATLLPKWKAFQTLIFLEQDDGLHHSSKIAAFDFDGCLANTSVKRVGAEAWSLMYPSIPQK 255
Query: 716 LKSLHEDGYKVVIFTNESNIDRWKNKRKVAIDSKVGRLNNFIKCVGVPVQVFIACGYGG- 892
L+SL++DGYK+VIFTNESNI+RWKNKR+VA+DSK+GRLNNFI V VPVQVF+ACG G
Sbjct: 256 LQSLYDDGYKLVIFTNESNIERWKNKRQVAVDSKLGRLNNFISQVKVPVQVFVACGIGSK 315
Query: 893 -----EDRYRKPKTGMWRLMEKHLNSGNEIDMDESFYVGDAAGRVGDHSDADIKFAEAIG 1057
ED +RKPK GMW +ME H N G ID+D+ FYVGDAAGR DHSDADIKFAEAIG
Sbjct: 316 SGKSEEDMFRKPKPGMWHIMESHFNGGIPIDIDQCFYVGDAAGRAKDHSDADIKFAEAIG 375
Query: 1058 LKFYVPEDYF 1087
LKFYVPE++F
Sbjct: 376 LKFYVPEEFF 385
>ref|XP_004146024.1| PREDICTED: polynucleotide 3'-phosphatase ZDP-like [Cucumis sativus]
Length = 387
Score = 362 bits (928), Expect = 1e-97
Identities = 194/370 (52%), Positives = 245/370 (66%), Gaps = 40/370 (10%)
Frame = +2
Query: 98 TTPRLHKTPYFYIQFLSQN-MXXXXXKIIAEYAXXXXXXXXXXXXAIPSKTLRLGLVNRG 274
T+P +H + +F FL + M KI+AEYA IP+ TLRLG V R
Sbjct: 16 TSPFIHFSSHFTPFFLHHSPMSSSSLKIVAEYAKSNRSTCKNCSKTIPASTLRLGFVTRD 75
Query: 275 ERGFDMTKWHHLNCF---PSSLNSVENITGFSLLNSTDQESLINF------AKSPKRKAE 427
RGFDMT+W H +C P ++S E+I GF+LL +DQE+L +K KR +
Sbjct: 76 GRGFDMTRWFHSDCASFGPRPVSSAEDINGFALLKDSDQEALRKMVCRSHESKVHKRDED 135
Query: 428 EIEG-----------------ENDEISGKKTKGVEI-------EIEIVFSDSDVKNEYKG 535
E +G E D + + K V++ +++IV + S++K +YK
Sbjct: 136 EEDGVEEGDQKKVKVHKKDGVEEDGVEERDQKNVKLSTSSLQPKLDIVLTASNIKTKYKD 195
Query: 536 ITLMNKWKAFETVIFLERDEGLVDSKKIAAFDFDGCLANTNVKRVGENAWSLMYGCIPDK 715
TL+ KWKAF+T+IFLE+D+GL S KIAAFDFDGCLANT+VKRVG AWSLMY IP K
Sbjct: 196 ATLLPKWKAFQTLIFLEQDDGLHHSSKIAAFDFDGCLANTSVKRVGAEAWSLMYPSIPQK 255
Query: 716 LKSLHEDGYKVVIFTNESNIDRWKNKRKVAIDSKVGRLNNFIKCVGVPVQVFIACGYGG- 892
L+SL++DGYK+VIFTNESNI+RWKNKR+VA+DSK+GRLNNFI V VPVQVF+ACG G
Sbjct: 256 LQSLYDDGYKLVIFTNESNIERWKNKRQVAVDSKLGRLNNFISQVKVPVQVFVACGIGSK 315
Query: 893 -----EDRYRKPKTGMWRLMEKHLNSGNEIDMDESFYVGDAAGRVGDHSDADIKFAEAIG 1057
ED +RKPK GMW +ME H N G ID+D+ FYVGDAAGR DHSDADIKFA+AIG
Sbjct: 316 SGKSEEDMFRKPKPGMWHIMESHFNGGIPIDIDQCFYVGDAAGRAKDHSDADIKFAQAIG 375
Query: 1058 LKFYVPEDYF 1087
LKFYVPE++F
Sbjct: 376 LKFYVPEEFF 385
>gb|AFK35881.1| unknown [Lotus japonicus]
Length = 380
Score = 350 bits (897), Expect = 6e-94
Identities = 189/329 (57%), Positives = 230/329 (69%), Gaps = 24/329 (7%)
Frame = +2
Query: 176 IIAEYAXXXXXXXXXXXXAIPSKTLRLGLVNRGE-RGFDMTKWHHLNCFPSSL-NSVENI 349
I AEYA I +K+LRLG+V++ + RGF+ KWH L CFP +S I
Sbjct: 51 IKAEYAKSNRSSCKGCSKTIENKSLRLGIVSKDKTRGFETVKWHRLTCFPPPYPDSPHII 110
Query: 350 TGFSLLNSTDQESLINFAKSP-------KRKAEEIEGEN---DEISGKK----TKGVEIE 487
TGFS L S+DQE++ +S R E+I+ E +E KK T V+
Sbjct: 111 TGFSSLESSDQEAVKELFESHDCSEEKVSRATEDIQNEQKETEESDSKKRKLSTSDVKAV 170
Query: 488 IEIVFSDSDVKNEYKGITLMNKWKAFETVIFLERDEGLVDSKKIAAFDFDGCLANTNVKR 667
++I FS SDV ++YK TL+ KWKAF+TVIFLERD+GL DS KIAAFDFDGCLANT V R
Sbjct: 171 VDISFSVSDVMSKYKDATLLPKWKAFQTVIFLERDDGLRDSSKIAAFDFDGCLANTAVNR 230
Query: 668 VGENAWSLMYGCIPDKLKSLHEDGYKVVIFTNESNIDRWKNKRKVAIDSKVGRLNNFIKC 847
VG AWSLMY IPDKL+SL+ +GYK+VIFTNESNI+RWK R+ A+DSK+GRLNNFI+
Sbjct: 231 VGPKAWSLMYQSIPDKLQSLYNNGYKLVIFTNESNIERWKKSRQKAVDSKIGRLNNFIEK 290
Query: 848 VGVPVQVFIACGYGG--------EDRYRKPKTGMWRLMEKHLNSGNEIDMDESFYVGDAA 1003
V VP+QVFIACG +D YRKPK GMW+LME+H NSG IDMD+SFYVGDAA
Sbjct: 291 VKVPIQVFIACGLSNSGKAAGKEDDPYRKPKPGMWQLMEQHSNSGITIDMDQSFYVGDAA 350
Query: 1004 GRVGDHSDADIKFAEAIGLKFYVPEDYFE 1090
GR DHSDADIKFAEAIGLKF++PE+YF+
Sbjct: 351 GRKSDHSDADIKFAEAIGLKFHLPEEYFK 379