BLASTX nr result

ID: Coptis25_contig00021534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021534
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541776.1| PREDICTED: protein spinster homolog 1-like [...   170   2e-40
ref|XP_002264030.2| PREDICTED: protein spinster homolog 1-like [...   167   2e-39
emb|CBI38036.3| unnamed protein product [Vitis vinifera]              167   2e-39
ref|XP_002518297.1| transporter, putative [Ricinus communis] gi|...   160   2e-37
ref|XP_003547108.1| PREDICTED: LOW QUALITY PROTEIN: protein spin...   159   6e-37

>ref|XP_003541776.1| PREDICTED: protein spinster homolog 1-like [Glycine max]
          Length = 532

 Score =  170 bits (431), Expect = 2e-40
 Identities = 81/116 (69%), Positives = 95/116 (81%)
 Frame = -3

Query: 678 ATQAPVNYVCLHCVKPNMRPLSMAMSTVSIHIFGDVPSSPLVGTLQDYVNNWRESALILT 499
           ATQ PVNYVCL CVKP++RPLSMAMSTV IHIFGDVPSSPLVG LQD +NNWR +ALILT
Sbjct: 416 ATQGPVNYVCLRCVKPSLRPLSMAMSTVVIHIFGDVPSSPLVGVLQDNINNWRTTALILT 475

Query: 498 SVLFLSAGIWFIGVFLHSVDKFDEDSRRQLATTESEDSRLLLEEKLMETPDEPVNS 331
           S+LFL+AGIWFIG+FLH+VD+FDEDS  Q++  E  ++  LL+EK  ET   P  S
Sbjct: 476 SILFLAAGIWFIGIFLHTVDRFDEDSEHQVSNVERSNTMPLLQEKTGETSAFPAQS 531


>ref|XP_002264030.2| PREDICTED: protein spinster homolog 1-like [Vitis vinifera]
          Length = 466

 Score =  167 bits (422), Expect = 2e-39
 Identities = 77/111 (69%), Positives = 93/111 (83%)
 Frame = -3

Query: 678 ATQAPVNYVCLHCVKPNMRPLSMAMSTVSIHIFGDVPSSPLVGTLQDYVNNWRESALILT 499
           ATQ PVNYVCLHCVKP++RPLSMAMSTV+IHIFGDVPSSPLVG LQD VNNWRE+ALILT
Sbjct: 353 ATQGPVNYVCLHCVKPSLRPLSMAMSTVAIHIFGDVPSSPLVGVLQDSVNNWRETALILT 412

Query: 498 SVLFLSAGIWFIGVFLHSVDKFDEDSRRQLATTESEDSRLLLEEKLMETPD 346
           S+LFL+AGIWFIG+FLH VD+F+E+S       +  ++  LLE+K  +T +
Sbjct: 413 SILFLAAGIWFIGIFLHGVDRFNEESEHHATRIDKSNTTPLLEDKTADTAE 463


>emb|CBI38036.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  167 bits (422), Expect = 2e-39
 Identities = 77/111 (69%), Positives = 93/111 (83%)
 Frame = -3

Query: 678 ATQAPVNYVCLHCVKPNMRPLSMAMSTVSIHIFGDVPSSPLVGTLQDYVNNWRESALILT 499
           ATQ PVNYVCLHCVKP++RPLSMAMSTV+IHIFGDVPSSPLVG LQD VNNWRE+ALILT
Sbjct: 314 ATQGPVNYVCLHCVKPSLRPLSMAMSTVAIHIFGDVPSSPLVGVLQDSVNNWRETALILT 373

Query: 498 SVLFLSAGIWFIGVFLHSVDKFDEDSRRQLATTESEDSRLLLEEKLMETPD 346
           S+LFL+AGIWFIG+FLH VD+F+E+S       +  ++  LLE+K  +T +
Sbjct: 374 SILFLAAGIWFIGIFLHGVDRFNEESEHHATRIDKSNTTPLLEDKTADTAE 424


>ref|XP_002518297.1| transporter, putative [Ricinus communis]
           gi|223542517|gb|EEF44057.1| transporter, putative
           [Ricinus communis]
          Length = 541

 Score =  160 bits (406), Expect = 2e-37
 Identities = 77/109 (70%), Positives = 91/109 (83%)
 Frame = -3

Query: 678 ATQAPVNYVCLHCVKPNMRPLSMAMSTVSIHIFGDVPSSPLVGTLQDYVNNWRESALILT 499
           ATQ PVNY+CLHCVKP+MRPLSMAMS VSIHIFGDVPSSPLVG LQD +NNWR +ALILT
Sbjct: 426 ATQGPVNYICLHCVKPSMRPLSMAMSIVSIHIFGDVPSSPLVGVLQDKINNWRLTALILT 485

Query: 498 SVLFLSAGIWFIGVFLHSVDKFDEDSRRQLATTESEDSRLLLEEKLMET 352
           ++LF +A IWFIG+FL SVDKF+E+S  Q+A T+  ++  LLE K  ET
Sbjct: 486 AILFPAAFIWFIGIFLKSVDKFNEESEHQVAVTDRSNTTPLLEGKTAET 534


>ref|XP_003547108.1| PREDICTED: LOW QUALITY PROTEIN: protein spinster homolog 1-like
           [Glycine max]
          Length = 496

 Score =  159 bits (401), Expect = 6e-37
 Identities = 77/116 (66%), Positives = 91/116 (78%)
 Frame = -3

Query: 678 ATQAPVNYVCLHCVKPNMRPLSMAMSTVSIHIFGDVPSSPLVGTLQDYVNNWRESALILT 499
           ATQ PVNYVCL CV P++RPLSMAMS V+IHIF DVPSSPLVG LQD +NNWR +A ILT
Sbjct: 380 ATQGPVNYVCLRCVIPSLRPLSMAMSAVAIHIFVDVPSSPLVGVLQDNINNWRTTAFILT 439

Query: 498 SVLFLSAGIWFIGVFLHSVDKFDEDSRRQLATTESEDSRLLLEEKLMETPDEPVNS 331
           S+LFL+AGI FIG+FLHSVD+FDEDS  Q++  E  ++  LL+EK  ET   P  S
Sbjct: 440 SILFLAAGICFIGIFLHSVDRFDEDSEHQVSNVERSNTMPLLQEKTGETSASPAQS 495


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