BLASTX nr result

ID: Coptis25_contig00021494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021494
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74312.1| hypothetical protein VITISV_037520 [Vitis vinifera]   116   3e-24
emb|CAN75156.1| hypothetical protein VITISV_042643 [Vitis vinifera]   116   3e-24
emb|CAN75609.1| hypothetical protein VITISV_002943 [Vitis vinifera]   115   5e-24
emb|CAN69265.1| hypothetical protein VITISV_040483 [Vitis vinifera]   112   4e-23
emb|CAN76604.1| hypothetical protein VITISV_012933 [Vitis vinifera]   112   4e-23

>emb|CAN74312.1| hypothetical protein VITISV_037520 [Vitis vinifera]
          Length = 1915

 Score =  116 bits (290), Expect = 3e-24
 Identities = 65/184 (35%), Positives = 95/184 (51%), Gaps = 2/184 (1%)
 Frame = -1

Query: 574  FWEDIWLDERPLSHVFPRLYAISDLRNLPVRSFMREHNGF-IAWDLSIHSALSDRDIVSV 398
            FWED+W   + L   F  LY +S +RNL V + +   N F ++W+ +    L+D +I  +
Sbjct: 1640 FWEDLWWGNQTLCAQFAELYRVSSVRNLTVSNVLG--NSFPLSWNFNFRRNLTDSEIDLL 1697

Query: 397  AALTMMLDSIPSVTPDRDKRLWSIDKKGRFSSRSFYFNLRSLISRHDLNAFPKFPGHIIW 218
              L   L S+       D R WS+   G FS +SF++ L       D N     P   +W
Sbjct: 1698 QRLMSSLHSVLLSPSSXDSRAWSLSSSGSFSVKSFFYALSK-----DSNPLMFLPAKFLW 1752

Query: 217  GSKVPSKVAFFVWCASLGKILTIDNLRKRR-VKEVLVNFCPLCLRDGESVNHILLLCPFS 41
             SKVPSKV    W  + GK+ T D L+ RR  K +   +C LC R+GES++H+ L CP +
Sbjct: 1753 SSKVPSKVKALAWLVAHGKVNTNDKLQLRRPYKALCPQWCILCKRNGESIDHLFLHCPVT 1812

Query: 40   WRVW 29
              +W
Sbjct: 1813 IGLW 1816


>emb|CAN75156.1| hypothetical protein VITISV_042643 [Vitis vinifera]
          Length = 721

 Score =  116 bits (290), Expect = 3e-24
 Identities = 65/184 (35%), Positives = 95/184 (51%), Gaps = 2/184 (1%)
 Frame = -1

Query: 574 FWEDIWLDERPLSHVFPRLYAISDLRNLPVRSFMREHNGF-IAWDLSIHSALSDRDIVSV 398
           FWED+W   + L   F  LY +S +RNL V + +   N F ++W+ +    L+D +I  +
Sbjct: 442 FWEDLWWGNQTLCAQFAELYRVSSVRNLTVSNVLG--NSFPLSWNFNFRRNLTDSEIDLL 499

Query: 397 AALTMMLDSIPSVTPDRDKRLWSIDKKGRFSSRSFYFNLRSLISRHDLNAFPKFPGHIIW 218
             L   L S+       D R WS+   G FS +SF++ L       D N     P   +W
Sbjct: 500 QRLMSSLHSVLLSPSSSDSRAWSLSSSGSFSVKSFFYALSK-----DSNPLMFLPAKFLW 554

Query: 217 GSKVPSKVAFFVWCASLGKILTIDNLRKRR-VKEVLVNFCPLCLRDGESVNHILLLCPFS 41
            SKVPSKV    W  + GK+ T D L+ RR  K +   +C LC R+GES++H+ L CP +
Sbjct: 555 SSKVPSKVKALAWLVAHGKVNTNDKLQLRRPYKALCPQWCILCKRNGESIDHLFLHCPVT 614

Query: 40  WRVW 29
             +W
Sbjct: 615 IGLW 618


>emb|CAN75609.1| hypothetical protein VITISV_002943 [Vitis vinifera]
          Length = 1599

 Score =  115 bits (288), Expect = 5e-24
 Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 2/184 (1%)
 Frame = -1

Query: 574  FWEDIWLDERPLSHVFPRLYAISDLRNLPVRSFMREHNGF-IAWDLSIHSALSDRDIVSV 398
            FWED+W   + L   F  LY +S +RNL V + +   N F ++W+ +    L+D +I   
Sbjct: 791  FWEDLWWGNQTLCAQFAELYRVSSVRNLTVSNVLG--NSFPLSWNFNFRRNLTDSEIDLF 848

Query: 397  AALTMMLDSIPSVTPDRDKRLWSIDKKGRFSSRSFYFNLRSLISRHDLNAFPKFPGHIIW 218
              L   L S+       D R WS+   G FS +SF++ L       D N     P   +W
Sbjct: 849  QRLMSSLHSVLLSPSSSDSRAWSLSSSGSFSVKSFFYALSK-----DSNPLMFLPAKFLW 903

Query: 217  GSKVPSKVAFFVWCASLGKILTIDNLRKRR-VKEVLVNFCPLCLRDGESVNHILLLCPFS 41
             SKVPSKV    W  + GK+ T D L+ RR  K +   +C LC R+GES++H+ L CP +
Sbjct: 904  SSKVPSKVKALAWLVAHGKVNTNDKLQLRRPYKALCPQWCILCKRNGESIDHLFLHCPVT 963

Query: 40   WRVW 29
              +W
Sbjct: 964  IGLW 967


>emb|CAN69265.1| hypothetical protein VITISV_040483 [Vitis vinifera]
          Length = 498

 Score =  112 bits (280), Expect = 4e-23
 Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
 Frame = -1

Query: 574 FWEDIWLDERPLSHVFPRLYAISDLRNLPVRSFMREHNGFIAWDLSIHSALSDRDIVSVA 395
           FWED+W  ++PL   +P L+ +   +N+P+ S +     F +W+L+    LSD  I  + 
Sbjct: 273 FWEDLWWGDQPLGSQYPSLFRVVLDKNIPISSVLGPTRLF-SWNLNFRHNLSDSKIEDLE 331

Query: 394 ALTMMLDSIPSVTPDRDKRLWSIDKKGRFSSRSFYFNLRSLISRHDLNAFPKFPGHIIWG 215
            L   LD +       D RLW +   G FS++SF+  L        +     FP   +W 
Sbjct: 332 GLMRSLDGVHLSPSVPDARLWPLSSSGLFSAKSFFLALSQFFGSPQV-----FPSKFVWN 386

Query: 214 SKVPSKVAFFVWCASLGKILTIDNLRKRR-VKEVLVNFCPLCLRDGESVNHILLLCPFSW 38
           S++P KV  F+W  +  K+ T D L+ RR  K + ++ C LC++ GES +HI L C  + 
Sbjct: 387 SQIPFKVQSFIWLVAHKKVNTNDMLQVRRPYKALSMDICILCMKHGESADHIFLHCSLTM 446

Query: 37  RVW 29
            +W
Sbjct: 447 GLW 449


>emb|CAN76604.1| hypothetical protein VITISV_012933 [Vitis vinifera]
          Length = 1863

 Score =  112 bits (280), Expect = 4e-23
 Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
 Frame = -1

Query: 574  FWEDIWLDERPLSHVFPRLYAISDLRNLPVRSFMREHNGFIAWDLSIHSALSDRDIVSVA 395
            FWED+W +++PL   +P L+ +   +N+P+ S +     F +W+L+    LSD +I  + 
Sbjct: 1583 FWEDLWWEDQPLGSQYPSLFRVVLDKNIPISSVLGPTRPF-SWNLNFRRNLSDSEIEDLE 1641

Query: 394  ALTMMLDSIPSVTPDRDKRLWSIDKKGRFSSRSFYFNLRSLISRHDLNAFPKFPGHIIWG 215
             L   LD +       D RLW +   G FS +SF+  L        +     FP   +W 
Sbjct: 1642 GLMRSLDGVHLSPSVPDARLWPLSSSGLFSIKSFFLALSQFFGSPQV-----FPSKFVWN 1696

Query: 214  SKVPSKVAFFVWCASLGKILTIDNLRKRR-VKEVLVNFCPLCLRDGESVNHILLLCPFSW 38
            S++P KV  F+W  +  K+ T D L+ RR  K +  + C LC++ GES +HI L C  + 
Sbjct: 1697 SQIPFKVQSFIWLVAHKKVNTNDMLQVRRPYKALSPDICILCMKHGESADHIFLHCSLTI 1756

Query: 37   RVW 29
             +W
Sbjct: 1757 GLW 1759


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