BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021489
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24272.3| unnamed protein product [Vitis vinifera]               98   6e-19
ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Sela...    94   2e-17

>emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 42/49 (85%), Positives = 45/49 (91%)
 Frame = +3

Query: 3   RIIKNLRVCGDCHEATKFISKLTDREIIMRDCYRFHHFVEGVCSCGDYW 149
           RIIKNLRVCGDCH ATKFISK+  R+IIMRD YRFHHFV+GVCSCGDYW
Sbjct: 681 RIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729


>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 972

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 42/49 (85%), Positives = 45/49 (91%)
 Frame = +3

Query: 3    RIIKNLRVCGDCHEATKFISKLTDREIIMRDCYRFHHFVEGVCSCGDYW 149
            RIIKNLRVCGDCH ATKFISK+  R+IIMRD YRFHHFV+GVCSCGDYW
Sbjct: 924  RIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972


>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
           gi|449476583|ref|XP_004154777.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = +3

Query: 3   RIIKNLRVCGDCHEATKFISKLTDREIIMRDCYRFHHFVEGVCSCGDYW 149
           +I KNLRVCGDCH ATKFISK+T+REII+RD  RFHHF +GVCSCGDYW
Sbjct: 768 QIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816


>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 3   RIIKNLRVCGDCHEATKFISKLTDREIIMRDCYRFHHFVEGVCSCGDYW 149
           RI KNLRVCGDCH ATK+ISK+T+REII+RD  RFHHF +G+CSCGDYW
Sbjct: 776 RIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824


>ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
           gi|300154346|gb|EFJ20981.1| hypothetical protein
           SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 39/49 (79%), Positives = 43/49 (87%)
 Frame = +3

Query: 3   RIIKNLRVCGDCHEATKFISKLTDREIIMRDCYRFHHFVEGVCSCGDYW 149
           RIIKNLRVCGDCH ATKFISK+T REI++RD +RFHHF  G CSCGDYW
Sbjct: 831 RIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879