BLASTX nr result

ID: Coptis25_contig00021484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021484
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447374.1| hypothetical protein SORBIDRAFT_06g033940 [S...    65   4e-09
emb|CBI23813.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002270229.1| PREDICTED: uncharacterized protein LOC100256...    65   6e-09
gb|ABR16610.1| unknown [Picea sitchensis]                              64   1e-08
ref|XP_003531587.1| PREDICTED: uncharacterized protein LOC100306...    61   8e-08

>ref|XP_002447374.1| hypothetical protein SORBIDRAFT_06g033940 [Sorghum bicolor]
           gi|241938557|gb|EES11702.1| hypothetical protein
           SORBIDRAFT_06g033940 [Sorghum bicolor]
          Length = 345

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 17/107 (15%)
 Frame = +2

Query: 2   KRISITFRKMDDSKLPFKFLPDPELQGIQPL---------------GSSQLNKLSAQQVP 136
           KRISITFRKMD +KLPF F PDP+LQ +QPL                +  ++  S+ +  
Sbjct: 226 KRISITFRKMDAAKLPFGFRPDPDLQNLQPLPLPAPVVPVRPAVVTSNHDIDSPSSSRPQ 285

Query: 137 SLPNLHNRNRISAAE--PNTARKTSSSSPIQFGNDDFPPLGAPTNKK 271
           S  ++  +  ++ A+  P  A  T +  P    +DDFP LGA +  K
Sbjct: 286 SASSIVRQGIVTRAQAGPAPAPMTQNGGPFSLSSDDFPALGASSPAK 332


>emb|CBI23813.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/85 (47%), Positives = 51/85 (60%)
 Frame = +2

Query: 2   KRISITFRKMDDSKLPFKFLPDPELQGIQPLGSSQLNKLSAQQVPSLPNLHNRNRISAAE 181
           KRISITFRKMD+S+LP+K+ PD EL  ++PL    L     QQ  +   + + +RIS   
Sbjct: 349 KRISITFRKMDESRLPYKYSPDRELLNVRPLAHRPLINTPLQQQKNTV-IRHESRIS--- 404

Query: 182 PNTARKTSSSSPIQFGNDDFPPLGA 256
                + SSSSP     DDFPPLGA
Sbjct: 405 -----QQSSSSP-HLDKDDFPPLGA 423


>ref|XP_002270229.1| PREDICTED: uncharacterized protein LOC100256702 [Vitis vinifera]
          Length = 457

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/85 (47%), Positives = 51/85 (60%)
 Frame = +2

Query: 2   KRISITFRKMDDSKLPFKFLPDPELQGIQPLGSSQLNKLSAQQVPSLPNLHNRNRISAAE 181
           KRISITFRKMD+S+LP+K+ PD EL  ++PL    L     QQ  +   + + +RIS   
Sbjct: 367 KRISITFRKMDESRLPYKYSPDRELLNVRPLAHRPLINTPLQQQKNTV-IRHESRIS--- 422

Query: 182 PNTARKTSSSSPIQFGNDDFPPLGA 256
                + SSSSP     DDFPPLGA
Sbjct: 423 -----QQSSSSP-HLDKDDFPPLGA 441


>gb|ABR16610.1| unknown [Picea sitchensis]
          Length = 496

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
 Frame = +2

Query: 2   KRISITFRKMDDSKLPFKFLPDPELQGIQPLGSSQLNKLSAQQVPSLPNLHNRNRISAAE 181
           KRISITFRKMD SK+P++FLP+P+LQ IQPL  S + K          N+HN++   +++
Sbjct: 403 KRISITFRKMDHSKMPYEFLPEPDLQNIQPL--SYIKK----------NIHNQSH--SSQ 448

Query: 182 PNTARK-------TSSSSPIQFGNDDFPPL 250
           P+ + +        +S+SP      DFPPL
Sbjct: 449 PSVSGEMILEGGGETSTSPFSMNAVDFPPL 478


>ref|XP_003531587.1| PREDICTED: uncharacterized protein LOC100306211 [Glycine max]
          Length = 423

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/49 (65%), Positives = 38/49 (77%)
 Frame = +2

Query: 2   KRISITFRKMDDSKLPFKFLPDPELQGIQPLGSSQLNKLSAQQVPSLPN 148
           KRISITFRKMD+SKLP+KF PDP+L GI+PL  S LNK    +V +L N
Sbjct: 364 KRISITFRKMDESKLPYKFSPDPDLVGIKPLIISPLNK-GQDEVGNLDN 411


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