BLASTX nr result

ID: Coptis25_contig00021475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021475
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266381.2| PREDICTED: protein NLRC3-like [Vitis vinifera]    124   6e-27
emb|CBI32101.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002889813.1| EMB2004 [Arabidopsis lyrata subsp. lyrata] g...   115   3e-24
gb|AEL99003.1| leucine-rich repeats-ribonuclease inhibitor domai...   115   4e-24
gb|AEL99002.1| leucine-rich repeats-ribonuclease inhibitor domai...   115   4e-24

>ref|XP_002266381.2| PREDICTED: protein NLRC3-like [Vitis vinifera]
          Length = 684

 Score =  124 bits (312), Expect = 6e-27
 Identities = 65/100 (65%), Positives = 78/100 (78%)
 Frame = -1

Query: 304 VLWKLVEKVLVPKSGKPVSTGENKFSLPGIKWSFAPGTNLSSGLSFTDEKDRREKKQKLS 125
           VLW+LVEK+L+PKS +  S  E K S PG+KWSFAPGTNL +GL+    K  RE KQKL+
Sbjct: 187 VLWRLVEKILLPKSSRSSSL-EKKSSSPGVKWSFAPGTNLLAGLT---AKFDRESKQKLN 242

Query: 124 DFAKELRAFSDVNMSGLKFGDDGLFFLAESLGYNQIAEEV 5
           +FAKE+R+F  V+MSG  FGD+GLFFLAESL YNQ AEEV
Sbjct: 243 EFAKEIRSFGSVDMSGRNFGDEGLFFLAESLAYNQNAEEV 282


>emb|CBI32101.3| unnamed protein product [Vitis vinifera]
          Length = 630

 Score =  124 bits (312), Expect = 6e-27
 Identities = 65/100 (65%), Positives = 78/100 (78%)
 Frame = -1

Query: 304 VLWKLVEKVLVPKSGKPVSTGENKFSLPGIKWSFAPGTNLSSGLSFTDEKDRREKKQKLS 125
           VLW+LVEK+L+PKS +  S  E K S PG+KWSFAPGTNL +GL+    K  RE KQKL+
Sbjct: 133 VLWRLVEKILLPKSSRSSSL-EKKSSSPGVKWSFAPGTNLLAGLT---AKFDRESKQKLN 188

Query: 124 DFAKELRAFSDVNMSGLKFGDDGLFFLAESLGYNQIAEEV 5
           +FAKE+R+F  V+MSG  FGD+GLFFLAESL YNQ AEEV
Sbjct: 189 EFAKEIRSFGSVDMSGRNFGDEGLFFLAESLAYNQNAEEV 228


>ref|XP_002889813.1| EMB2004 [Arabidopsis lyrata subsp. lyrata]
           gi|297335655|gb|EFH66072.1| EMB2004 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/100 (61%), Positives = 72/100 (72%)
 Frame = -1

Query: 304 VLWKLVEKVLVPKSGKPVSTGENKFSLPGIKWSFAPGTNLSSGLSFTDEKDRREKKQKLS 125
           VLWK+VEK + PKS K  + GENK S  G+KWS   GTNL  G +    K  RE KQ+L+
Sbjct: 108 VLWKVVEKFMSPKSPK-TAAGENKSSTQGVKWSIGAGTNLLQGFA---AKVDREAKQRLN 163

Query: 124 DFAKELRAFSDVNMSGLKFGDDGLFFLAESLGYNQIAEEV 5
           +FAKELR+F  V+MSG  FGD+GLFFLAESLGYNQ  EEV
Sbjct: 164 EFAKELRSFRSVDMSGCNFGDEGLFFLAESLGYNQTVEEV 203


>gb|AEL99003.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein, partial [Silene latifolia]
          Length = 592

 Score =  115 bits (288), Expect = 4e-24
 Identities = 63/101 (62%), Positives = 72/101 (71%)
 Frame = -1

Query: 304 VLWKLVEKVLVPKSGKPVSTGENKFSLPGIKWSFAPGTNLSSGLSFTDEKDRREKKQKLS 125
           VLWKLV KVL+PK  K  +T ENK S P  KWSFAPG+NL   LS   +K  R+ K KL 
Sbjct: 100 VLWKLVGKVLLPKPQK-FTTAENKPSTPATKWSFAPGSNLFKNLS---QKIERDSKLKLD 155

Query: 124 DFAKELRAFSDVNMSGLKFGDDGLFFLAESLGYNQIAEEVD 2
           DFA+ELR+F  V+MSG  FGDDGL FLAESL YN+  EEVD
Sbjct: 156 DFARELRSFRIVDMSGRNFGDDGLIFLAESLAYNKAVEEVD 196


>gb|AEL99002.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein, partial [Silene latifolia]
          Length = 592

 Score =  115 bits (288), Expect = 4e-24
 Identities = 63/101 (62%), Positives = 72/101 (71%)
 Frame = -1

Query: 304 VLWKLVEKVLVPKSGKPVSTGENKFSLPGIKWSFAPGTNLSSGLSFTDEKDRREKKQKLS 125
           VLWKLV KVL+PK  K  +T ENK S P  KWSFAPG+NL   LS   +K  R+ K KL 
Sbjct: 100 VLWKLVGKVLLPKPQK-FTTAENKPSTPATKWSFAPGSNLFKNLS---QKIERDSKLKLD 155

Query: 124 DFAKELRAFSDVNMSGLKFGDDGLFFLAESLGYNQIAEEVD 2
           DFA+ELR+F  V+MSG  FGDDGL FLAESL YN+  EEVD
Sbjct: 156 DFARELRSFRIVDMSGRNFGDDGLIFLAESLAYNKAVEEVD 196


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