BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021469
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19452.3| unnamed protein product [Vitis vinifera]              244   4e-63
gb|ABK26521.1| unknown [Picea sitchensis]                             180   1e-43
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi...   171   5e-41
ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40

>emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  244 bits (624), Expect = 4e-63
 Identities = 120/175 (68%), Positives = 140/175 (80%)
 Frame = -3

Query: 526  HPHKHLEFGVRAAMKILESEPEDETTHILLCNLYAASGMWEDAMRVRRWMRDKGLKKQET 347
            H  K L+ GV AA KILE EPEDE T+ILL NLYA+SG+WEDA++VR+ MRDKGL+K E 
Sbjct: 728  HASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRK-EV 786

Query: 346  GCSWIEADNRMHVFVAGDISHPWRDEIYVKLEGVNRGCRGMGYVPVTEYVLHDVDELQKE 167
            GCSWI+  NR HVFVAGD+ HP R EIY KL  +N  CR MGYVP+TE VLHDVDE +KE
Sbjct: 787  GCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHDVDETEKE 846

Query: 166  TIIGCHSEKLAVSFGLLHSGQGSKGVIRVMKNLRVCGDCHDWMKYISRLERIDIV 2
             I+GCHSEKLAVSFGLL+ G G+ GVIRVMKNLRVC DCH WMK+ S LE+ +I+
Sbjct: 847  AILGCHSEKLAVSFGLLNCGVGN-GVIRVMKNLRVCEDCHSWMKFASLLEKREIL 900


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  180 bits (457), Expect = 1e-43
 Identities = 87/173 (50%), Positives = 123/173 (71%)
 Frame = -3

Query: 520 HKHLEFGVRAAMKILESEPEDETTHILLCNLYAASGMWEDAMRVRRWMRDKGLKKQETGC 341
           H ++E   RA  +++E  PE+  T++LL N+YAA+G W+DA +VR+ M+D+ +KK E GC
Sbjct: 180 HGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKK-EPGC 238

Query: 340 SWIEADNRMHVFVAGDISHPWRDEIYVKLEGVNRGCRGMGYVPVTEYVLHDVDELQKETI 161
           SWIE  N++H F+ GD SHP  +EIY  LE +    +  GY+P T +VLHDV+E QKE I
Sbjct: 239 SWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWI 298

Query: 160 IGCHSEKLAVSFGLLHSGQGSKGVIRVMKNLRVCGDCHDWMKYISRLERIDIV 2
           +G HSEKLA++FG++ +  G+   IRV+KNLRVCGDCH   K+ISR+   +IV
Sbjct: 299 LGHHSEKLAIAFGIISTPPGT--TIRVVKNLRVCGDCHTATKFISRIVSREIV 349


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
            [Vitis vinifera]
          Length = 799

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/173 (46%), Positives = 120/173 (69%)
 Frame = -3

Query: 520  HKHLEFGVRAAMKILESEPEDETTHILLCNLYAASGMWEDAMRVRRWMRDKGLKKQETGC 341
            H +++ G++AA ++ E  P+ + T++LL N+YA  G W+D  +VR+ MRDKG+KK E GC
Sbjct: 609  HGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKK-EPGC 667

Query: 340  SWIEADNRMHVFVAGDISHPWRDEIYVKLEGVNRGCRGMGYVPVTEYVLHDVDELQKETI 161
            SWIE +N++HVF+  DI HP    +Y  LE +    R +GY+P T++VLHD++  QKE +
Sbjct: 668  SWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYV 727

Query: 160  IGCHSEKLAVSFGLLHSGQGSKGVIRVMKNLRVCGDCHDWMKYISRLERIDIV 2
            +  HSEKLAV FGLL    G+   +RV KNLR+CGDCH+  K++S++   +IV
Sbjct: 728  LSTHSEKLAVGFGLLKLPLGA--TVRVFKNLRICGDCHNAFKFMSKVVEREIV 778


>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  171 bits (434), Expect = 5e-41
 Identities = 82/173 (47%), Positives = 121/173 (69%)
 Frame = -3

Query: 520 HKHLEFGVRAAMKILESEPEDETTHILLCNLYAASGMWEDAMRVRRWMRDKGLKKQETGC 341
           HK+ E G  AA ++ E +P    TH LL N+YA++G WED  +VR+ M+D G+KK E  C
Sbjct: 457 HKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKK-EPAC 515

Query: 340 SWIEADNRMHVFVAGDISHPWRDEIYVKLEGVNRGCRGMGYVPVTEYVLHDVDELQKETI 161
           SW+E +N +HVFVA D++HP +++I+   E +N+  + +GYVP T +VL  VD+ +KE  
Sbjct: 516 SWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELN 575

Query: 160 IGCHSEKLAVSFGLLHSGQGSKGVIRVMKNLRVCGDCHDWMKYISRLERIDIV 2
           +  HSEKLA+SF LL++  GS   IR+MKN+RVCGDCH  +KY+S + + +I+
Sbjct: 576 LQYHSEKLALSFALLNTPPGS--TIRIMKNIRVCGDCHSAIKYVSLVVKREII 626


>ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  170 bits (431), Expect = 1e-40
 Identities = 80/173 (46%), Positives = 124/173 (71%)
 Frame = -3

Query: 520  HKHLEFGVRAAMKILESEPEDETTHILLCNLYAASGMWEDAMRVRRWMRDKGLKKQETGC 341
            H ++EFG RAAMK+ E EPE ++ +ILL N++AA GMW+D   VR  M  +G+KK E GC
Sbjct: 815  HGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKK-EPGC 873

Query: 340  SWIEADNRMHVFVAGDISHPWRDEIYVKLEGVNRGCRGMGYVPVTEYVLHDVDELQKETI 161
            SW+E + ++HVF++ D SHP   EI++KL+ +++    +GY P T++VLH+V + +K+ +
Sbjct: 874  SWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQEL 933

Query: 160  IGCHSEKLAVSFGLLHSGQGSKGVIRVMKNLRVCGDCHDWMKYISRLERIDIV 2
            +  HSE+LA++F LL +   ++  IR+ KNLR+CGDCHD+MK IS +   ++V
Sbjct: 934  LFYHSERLALAFALLST--STRKTIRIFKNLRICGDCHDFMKSISEITNQELV 984