BLASTX nr result

ID: Coptis25_contig00021466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021466
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]          68   4e-09
dbj|BAL15050.1| glutamate receptor 2.3 [Solanum lycopersicum]          67   9e-09
dbj|BAL15051.1| glutamate receptor 2.4 [Solanum lycopersicum]          66   1e-08
dbj|BAL15049.1| glutamate receptor 2.2 [Solanum lycopersicum]          62   2e-07
gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana...    62   2e-07

>dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]
          Length = 965

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
 Frame = -2

Query: 1167 GDKMEAINREWFGQQVSCQEQ-GTTTSESLSFDSFKGLFXXXXXXXXXXXXXXXXIFLYE 991
            G+ M  I ++WFG +  C +Q G   + SL+ DSFKGLF                IFLY+
Sbjct: 803  GEFMNNIIQKWFGNETECPKQDGMVIASSLTLDSFKGLFLIAGVSAGSALLLFFLIFLYQ 862

Query: 990  HRNIITSECSVSQKNSAMAVQFDKEKDIFSKGSKKIDFLCARTTDGRE----SCVAECNA 823
            +R I+ ++ SV QK  A+A  FDKEKD  +  S+K        ++G E    +  AE  A
Sbjct: 863  NREILATDDSVWQKLCAIANAFDKEKDNPNSMSQK-------PSEGNEIQTATLFAESEA 915

Query: 822  STPQIPASSVSVHEDTVYSTEGSIP------STNHCTPIQD 718
            ST  +P  S+   E  +    G+ P      +T   TP+ +
Sbjct: 916  STEILPNLSLQSPEIKISDGLGASPPPEGFSTTEPGTPVHE 956


>dbj|BAL15050.1| glutamate receptor 2.3 [Solanum lycopersicum]
          Length = 962

 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
 Frame = -2

Query: 1167 GDKMEAINREWFGQQVSCQEQ-GTTTSESLSFDSFKGLFXXXXXXXXXXXXXXXXIFLYE 991
            GD M  I ++WFG +  C +Q G   + SL+ DSFKGLF                IFLY+
Sbjct: 801  GDAMNEIIQKWFGNETECPKQDGMAIASSLTLDSFKGLFLIAGVSAGSALLLFFLIFLYQ 860

Query: 990  HRNIITSECSVSQKNSAMAVQFDKEKDIFSKGSKKIDFLCARTTDGRESCV---AECNAS 820
            +R I+ ++ S+ +K  ++A  FD E+D  +  S K        ++G ES     AE  AS
Sbjct: 861  NREILATDDSIRKKLCSIAEVFDSERDNSNSQSTK-------PSEGNESLTAVFAESEAS 913

Query: 819  TPQIPASSVSVHEDTVYSTEGSIPST 742
            T   P   + + E  +    G  P+T
Sbjct: 914  TEISPNLPLQIPEIGISHGLGESPAT 939


>dbj|BAL15051.1| glutamate receptor 2.4 [Solanum lycopersicum]
          Length = 983

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 12/162 (7%)
 Frame = -2

Query: 1167 GDKMEAINREWFGQQVSCQ--EQGTTTSESLSFDSFKGLFXXXXXXXXXXXXXXXXIFLY 994
            G+ M  I ++WFG +  C   +  + TS+SL+ DSFKGLF                 FLY
Sbjct: 811  GEFMNNIIQKWFGNETDCPRIDGMSITSDSLTLDSFKGLFVTAGVSAGSALLLFFLNFLY 870

Query: 993  EHRNIITSECSVSQKNSAMAVQFDKEKDIFSKGSKKIDFLCARTTDGRES------CVAE 832
            ++R I+ ++ SV +K SA+A  FD+EKD  +  S+         ++G  S        +E
Sbjct: 871  QNREILATDDSVWKKLSAIAKAFDEEKDNSNSMSE-------NPSEGNGSQTTTLLAESE 923

Query: 831  CNASTPQIPASSVSVHEDTVYSTEGSI----PSTNHCTPIQD 718
             +A  P +P  S+ +           I     +T H TP+ +
Sbjct: 924  ASAEVPDLPLQSIDIRISDRLGASSPIAEGFSTTEHGTPVHE 965


>dbj|BAL15049.1| glutamate receptor 2.2 [Solanum lycopersicum]
          Length = 980

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = -2

Query: 1167 GDKMEAINREWFGQQVSCQEQGTT--TSESLSFDSFKGLFXXXXXXXXXXXXXXXXIFLY 994
            G+ M ++ ++WFG +  C +   T  TS+SL+ DSFKGLF                 F+Y
Sbjct: 820  GEFMNSVIQKWFGNETDCTQNDETDITSDSLTLDSFKGLFLIAGVSAGSALLLFFLNFVY 879

Query: 993  EHRNIITSECSVSQKNSAMAVQFDKEKD 910
            ++R I+ ++ S+ +K +A+A  FD+EKD
Sbjct: 880  QNREILATDDSICKKLTAIAKVFDQEKD 907


>gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum]
          Length = 952

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
 Frame = -2

Query: 1167 GDKMEAINREWFGQQVSCQEQG--TTTSESLSFDSFKGLFXXXXXXXXXXXXXXXXIFLY 994
            G+ M  I ++WFG +  C E+     TS+SL+ DSFKGLF                IFL+
Sbjct: 790  GEFMNNIIQKWFGNETDCPEKNGMLITSDSLTLDSFKGLFLIAGVSAGSALLTFLLIFLH 849

Query: 993  EHRNIITSECSVSQKNSAMAVQFDKEKDIFSKGSKKIDFLCARTTDGRESCVAECNASTP 814
            ++R I+ ++ S+ QK SA+A  FD+ KD  +  S+K         +  ES  A   ++T 
Sbjct: 850  QNREILATDDSIWQKLSALAKVFDEAKDNSNVKSEK--------HEANESQTATQFSATA 901

Query: 813  QIPAS--SVSVHEDTVYSTEGSIPSTNH---CTPIQDPPGVIEITSVN 685
              P +  +++     +  ++G   ST H    TP    P    IT  N
Sbjct: 902  AYPDTLRNLASQSPEIRISDGRGASTAHEGFSTPEPGTPAHETITEAN 949


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