BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021459
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871840.1| F-box family protein [Arabidopsis lyrata sub...    86   9e-15
ref|NP_197659.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    82   1e-13
ref|NP_176803.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    82   2e-13
ref|NP_197662.2| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    81   2e-13
dbj|BAB11676.1| unnamed protein product [Arabidopsis thaliana] g...    81   2e-13

>ref|XP_002871840.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317677|gb|EFH48099.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 442

 Score = 85.9 bits (211), Expect = 9e-15
 Identities = 55/169 (32%), Positives = 80/169 (47%)
 Frame = +3

Query: 291 DRLSSMPEEIRDCILSFLPMEDVVRTCILSRKWRDICSSISHLEFNCPDFRSARYFKNFV 470
           DRLS +PE +   ILSFL  +D VRT +LS +WRD+   +  L+ +  DF       +FV
Sbjct: 12  DRLSILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSDDNPSASFV 71

Query: 471 DCFLITHGRFEIRSFKLXXXXXXXXXXXXXXXXXAWIYFAIKHNVRVMELSFPWELFPDS 650
           D FL   G   +R FKL                   +   I+H        F   + P  
Sbjct: 72  DKFLNFRGESYLRGFKLNTDHDVYDTSTLEACLMGLVKCKIQHFEIENSFGFCILMMPLI 131

Query: 651 VFMCHTLTELRLEYVEIHLPRTVSFPCLKILKLTENVLYGEKLTENLFS 797
           + MCHTL  L+L +V +    ++S PCL+I+   + +  G+K  E L S
Sbjct: 132 LSMCHTLVTLKLSFVILSKFESLSLPCLEIMHFEKVIFPGDKAAEALIS 180


>ref|NP_197659.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75262763|sp|Q9FNJ4.1|FDL32_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At5g22670
           gi|10178241|dbj|BAB11673.1| unnamed protein product
           [Arabidopsis thaliana] gi|332005679|gb|AED93062.1|
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 443

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
 Frame = +3

Query: 273 STKQTI---DRLSSMPEEIRDCILSFLPMEDVVRTCILSRKWRDICSSISHLEFNCPDFR 443
           STK+ +   D +S +P+++   ILS LP +  VRT +LS++W+    S+  LEFN  +F 
Sbjct: 2   STKRGVTSQDSISLLPDDLLCRILSNLPTKVAVRTSVLSKRWKRFSLSVPLLEFNVSEFH 61

Query: 444 SARYFKNFVDCFLITHGRFEIRSFKLXXXXXXXXXXXXXXXXXAWIYFAIKHNVRVMELS 623
               F   V  FL T     I   KL                  WI+ A+K  V+ +++ 
Sbjct: 62  GYYEFARVVHGFLDTSRETCIHKLKL----AFEKKQHDRSYLTQWIHNAVKRKVQHLDIG 117

Query: 624 ----FPWELFPDSVFMCHTLTELRLEYVEIHLPRTVSFPCLKILKLTENVLYGEKLTENL 791
                  EL P S++ C TL  LRL  V +     VS P LK + L +N+   + L ENL
Sbjct: 118 RWSYLGQELIPHSLYTCETLVSLRLHNVSLPDFDHVSLPRLKTMHLIDNIYPNDALLENL 177

Query: 792 FSS 800
            SS
Sbjct: 178 ISS 180


>ref|NP_176803.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75262213|sp|Q9C8Y8.1|FDL7_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At1g66290
           gi|12324394|gb|AAG52161.1|AC020665_6 hypothetical
           protein; 16490-14953 [Arabidopsis thaliana]
           gi|332196370|gb|AEE34491.1| putative
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 453

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 49/170 (28%), Positives = 82/170 (48%)
 Frame = +3

Query: 288 IDRLSSMPEEIRDCILSFLPMEDVVRTCILSRKWRDICSSISHLEFNCPDFRSARYFKNF 467
           +D +S +PE +   +L  LP +DV++T +LS KWR+I   +  L+ +   F       +F
Sbjct: 28  VDWISDLPEALIVLVLLNLPTKDVIKTSVLSTKWRNIWRYVPRLDLDNRHFTEFDSLASF 87

Query: 468 VDCFLITHGRFEIRSFKLXXXXXXXXXXXXXXXXXAWIYFAIKHNVRVMELSFPWELFPD 647
           +D F+ ++ +  +  FKL                  WIY AIK  V+ +++++P      
Sbjct: 88  IDRFMRSNRK--VNKFKLRCGSDLDGDVDLATCSWKWIYMAIKRKVQHIDVTWPGVRIYP 145

Query: 648 SVFMCHTLTELRLEYVEIHLPRTVSFPCLKILKLTENVLYGEKLTENLFS 797
            ++ C +L  L+L  V +  P  VS P LK+L L     Y E   + L S
Sbjct: 146 EIYNCESLVSLKLSEVTLTKPEFVSLPSLKVLVLDWVEFYNEFAFDMLMS 195


>ref|NP_197662.2| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|143015960|sp|Q9FNJ1.2|FDL47_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At5g22700
           gi|332005682|gb|AED93065.1| F-box/FBD/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 437

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 4/174 (2%)
 Frame = +3

Query: 291 DRLSSMPEEIRDCILSFLPMEDVVRTCILSRKWRDICSSISHLEFNCPDFRSARYFKNFV 470
           DR+SS+P+E+   ILS LP ++ V T ILS +WR I  S   L+ +   F  A  F +F 
Sbjct: 6   DRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVLDIDIDAFDDATTFVSFA 65

Query: 471 DCFLITHGRFEIRSFKLXXXXXXXXXXXXXXXXXAWIYFAIKHNVRVMEL----SFPWEL 638
             FL       +  FKL                  WI  A+   ++ +E+    SF +E 
Sbjct: 66  SRFLEFSKDSCLHKFKL----SVERDDVDMCTIMPWIQDAVNRRIQHLEVDCRFSFHFEA 121

Query: 639 FPDSVFMCHTLTELRLEYVEIHLPRTVSFPCLKILKLTENVLYGEKLTENLFSS 800
              ++++  TL  LRL +V +H    VS P LK++ L EN+ Y  +  EN  SS
Sbjct: 122 VYLTLYLSETLVSLRLHFVTLHRYEFVSLPNLKVMHLEENIYYCLETLENFISS 175


>dbj|BAB11676.1| unnamed protein product [Arabidopsis thaliana]
           gi|225898923|dbj|BAH30592.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 452

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 4/174 (2%)
 Frame = +3

Query: 291 DRLSSMPEEIRDCILSFLPMEDVVRTCILSRKWRDICSSISHLEFNCPDFRSARYFKNFV 470
           DR+SS+P+E+   ILS LP ++ V T ILS +WR I  S   L+ +   F  A  F +F 
Sbjct: 21  DRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVLDIDIDAFDDATTFVSFA 80

Query: 471 DCFLITHGRFEIRSFKLXXXXXXXXXXXXXXXXXAWIYFAIKHNVRVMEL----SFPWEL 638
             FL       +  FKL                  WI  A+   ++ +E+    SF +E 
Sbjct: 81  SRFLEFSKDSCLHKFKL----SVERDDVDMCTIMPWIQDAVNRRIQHLEVDCRFSFHFEA 136

Query: 639 FPDSVFMCHTLTELRLEYVEIHLPRTVSFPCLKILKLTENVLYGEKLTENLFSS 800
              ++++  TL  LRL +V +H    VS P LK++ L EN+ Y  +  EN  SS
Sbjct: 137 VYLTLYLSETLVSLRLHFVTLHRYEFVSLPNLKVMHLEENIYYCLETLENFISS 190