BLASTX nr result

ID: Coptis25_contig00021453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021453
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger d...    90   4e-16
ref|XP_002519457.1| zinc finger protein, putative [Ricinus commu...    83   5e-14
ref|XP_002326381.1| predicted protein [Populus trichocarpa] gi|2...    82   8e-14
ref|XP_002523718.1| zinc finger protein, putative [Ricinus commu...    82   1e-13
ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13

>ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 isoform 2 [Vitis vinifera]
           gi|225441159|ref|XP_002268149.1| PREDICTED: RING finger
           and CHY zinc finger domain-containing protein 1 isoform
           1 [Vitis vinifera] gi|297739980|emb|CBI30162.3| unnamed
           protein product [Vitis vinifera]
          Length = 289

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 40/48 (83%), Positives = 42/48 (87%)
 Frame = -2

Query: 702 NKMVWILSNDCGTTSEVHFHIVAHKCLSCNSYNTRQTRGSVASCSSTL 559
           NKMVWIL NDCG TSEV+FHIVAHKCL CNSYNTRQTRG  ASCSS +
Sbjct: 237 NKMVWILCNDCGETSEVNFHIVAHKCLKCNSYNTRQTRGGPASCSSRI 284


>ref|XP_002519457.1| zinc finger protein, putative [Ricinus communis]
           gi|223541320|gb|EEF42871.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 282

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 37/48 (77%), Positives = 39/48 (81%)
 Frame = -2

Query: 702 NKMVWILSNDCGTTSEVHFHIVAHKCLSCNSYNTRQTRGSVASCSSTL 559
           NKMVWIL NDCG TSEV FHIVA KC+ CNSYNTRQTRG   SCSS +
Sbjct: 232 NKMVWILCNDCGETSEVIFHIVARKCIKCNSYNTRQTRGGPTSCSSRI 279


>ref|XP_002326381.1| predicted protein [Populus trichocarpa] gi|222833574|gb|EEE72051.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 36/48 (75%), Positives = 40/48 (83%)
 Frame = -2

Query: 702 NKMVWILSNDCGTTSEVHFHIVAHKCLSCNSYNTRQTRGSVASCSSTL 559
           NKMVWIL NDCG TSEV+FHIVAHKCL CNSYNT+QTR     CSS++
Sbjct: 227 NKMVWILCNDCGETSEVNFHIVAHKCLKCNSYNTKQTRVGPPPCSSSI 274


>ref|XP_002523718.1| zinc finger protein, putative [Ricinus communis]
           gi|223537022|gb|EEF38658.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 275

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 38/49 (77%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
 Frame = -2

Query: 702 NKMVWILSNDCGTTSEVHFHIVAHKCLSCNSYNTRQTRG-SVASCSSTL 559
           NKMVWIL NDCG  S V FHIVAHKCL+C SYNTRQTRG S ASCSS +
Sbjct: 222 NKMVWILCNDCGANSHVQFHIVAHKCLNCKSYNTRQTRGDSTASCSSEM 270


>ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|222850712|gb|EEE88259.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 38/47 (80%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = -2

Query: 702 NKMVWILSNDCGTTSEVHFHIVAHKCLSCNSYNTRQTRGS-VASCSS 565
           NKMVWIL NDCG  S V FHIVAHKCL CNSYNTRQTRG   ASCSS
Sbjct: 238 NKMVWILCNDCGANSHVQFHIVAHKCLRCNSYNTRQTRGGPAASCSS 284


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