BLASTX nr result

ID: Coptis25_contig00021452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021452
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD02556.1| PGPD14 [Petunia x hybrida]                             150   5e-34
ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger d...   149   7e-34
ref|XP_002519457.1| zinc finger protein, putative [Ricinus commu...   147   4e-33
ref|XP_002523718.1| zinc finger protein, putative [Ricinus commu...   147   4e-33
ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|2...   144   4e-32

>gb|AAD02556.1| PGPD14 [Petunia x hybrida]
          Length = 285

 Score =  150 bits (378), Expect = 5e-34
 Identities = 65/82 (79%), Positives = 73/82 (89%)
 Frame = -1

Query: 888 FACPVCSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKC 709
           ++CPVCSRS CDMS+VWEKLDQE+ STPMPEMYQNKMVWILCNDCG TSEV+FHIVA KC
Sbjct: 199 YSCPVCSRSYCDMSRVWEKLDQEVASTPMPEMYQNKMVWILCNDCGETSEVNFHIVARKC 258

Query: 708 LSCNSYNTRQTRGSVASCSSTL 643
            +C SYNTRQTRG  +SCSS +
Sbjct: 259 PNCKSYNTRQTRGGPSSCSSRI 280


>ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 isoform 2 [Vitis vinifera]
           gi|225441159|ref|XP_002268149.1| PREDICTED: RING finger
           and CHY zinc finger domain-containing protein 1 isoform
           1 [Vitis vinifera] gi|297739980|emb|CBI30162.3| unnamed
           protein product [Vitis vinifera]
          Length = 289

 Score =  149 bits (377), Expect = 7e-34
 Identities = 64/82 (78%), Positives = 72/82 (87%)
 Frame = -1

Query: 888 FACPVCSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKC 709
           ++CPVCS+S CDMS VWEKLDQE+  TPMP M++NKMVWILCNDCG TSEV+FHIVAHKC
Sbjct: 203 YSCPVCSKSYCDMSHVWEKLDQEVALTPMPSMFENKMVWILCNDCGETSEVNFHIVAHKC 262

Query: 708 LSCNSYNTRQTRGSVASCSSTL 643
           L CNSYNTRQTRG  ASCSS +
Sbjct: 263 LKCNSYNTRQTRGGPASCSSRI 284


>ref|XP_002519457.1| zinc finger protein, putative [Ricinus communis]
           gi|223541320|gb|EEF42871.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 282

 Score =  147 bits (370), Expect = 4e-33
 Identities = 64/82 (78%), Positives = 71/82 (86%)
 Frame = -1

Query: 888 FACPVCSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKC 709
           +ACPVCSRS CDMS VWEKLD+E+ STPMP++YQNKMVWILCNDCG TSEV FHIVA KC
Sbjct: 198 YACPVCSRSYCDMSCVWEKLDREVASTPMPQIYQNKMVWILCNDCGETSEVIFHIVARKC 257

Query: 708 LSCNSYNTRQTRGSVASCSSTL 643
           + CNSYNTRQTRG   SCSS +
Sbjct: 258 IKCNSYNTRQTRGGPTSCSSRI 279


>ref|XP_002523718.1| zinc finger protein, putative [Ricinus communis]
           gi|223537022|gb|EEF38658.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 275

 Score =  147 bits (370), Expect = 4e-33
 Identities = 64/83 (77%), Positives = 73/83 (87%), Gaps = 1/83 (1%)
 Frame = -1

Query: 888 FACPVCSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKC 709
           ++CPVCS+S+CDMSK+W KLDQEI +TPMPE+YQNKMVWILCNDCG  S V FHIVAHKC
Sbjct: 188 YSCPVCSKSICDMSKLWRKLDQEIAATPMPEIYQNKMVWILCNDCGANSHVQFHIVAHKC 247

Query: 708 LSCNSYNTRQTRG-SVASCSSTL 643
           L+C SYNTRQTRG S ASCSS +
Sbjct: 248 LNCKSYNTRQTRGDSTASCSSEM 270


>ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|222850712|gb|EEE88259.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  144 bits (362), Expect = 4e-32
 Identities = 62/81 (76%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = -1

Query: 888 FACPVCSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKC 709
           ++CPVCS+S+CDM+++W+KLDQEI +TPMPE YQNKMVWILCNDCG  S V FHIVAHKC
Sbjct: 204 YSCPVCSKSICDMTRLWKKLDQEIAATPMPETYQNKMVWILCNDCGANSHVQFHIVAHKC 263

Query: 708 LSCNSYNTRQTRGS-VASCSS 649
           L CNSYNTRQTRG   ASCSS
Sbjct: 264 LRCNSYNTRQTRGGPAASCSS 284


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