BLASTX nr result

ID: Coptis25_contig00021444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021444
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indi...    81   1e-13
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   1e-12
gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Ja...    76   3e-12
ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group] g...    76   3e-12
gb|EEE60843.1| hypothetical protein OsJ_14468 [Oryza sativa Japo...    76   3e-12

>gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indica Group]
          Length = 405

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/91 (42%), Positives = 53/91 (58%)
 Frame = +3

Query: 6   FNSWINDLGLADLGFKGPKYTWNNNRNFGDHILERLDRALPTPEWLTVFPHVHVKTIANA 185
           F   I++LGL DLG+ GP YTW+N +N  D +LERLDR L   EW  +FPH  V  +   
Sbjct: 27  FPRHIHNLGLIDLGYNGPAYTWSNKKNGCDLVLERLDRCLANVEWCMLFPHTTVYHLPML 86

Query: 186 SSDHLSLHITLNKPNEMCPKPFRFYSMWLSD 278
            SDH  +   LN  +    K F+F + W+S+
Sbjct: 87  YSDHAPIIAILNPIHHHPKKSFKFENWWISE 117


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/101 (41%), Positives = 49/101 (48%)
 Frame = +3

Query: 15  WINDLGLADLGFKGPKYTWNNNRNFGDHILERLDRALPTPEWLTVFPHVHVKTIANASSD 194
           WI    L DLGF+GPK+TW N R  G  I ERLDRAL   EWL +FP   V  +    SD
Sbjct: 166 WIAANALLDLGFQGPKFTWTNGRTGGSLIKERLDRALVNSEWLDLFPDTKVIHLPRTFSD 225

Query: 195 HLSLHITLNKPNEMCPKPFRFYSMWLSDISCKPCIDNAWKS 317
           H  L I  N+       PFR   +W         I+  W S
Sbjct: 226 HCPLLILFNENPRSESFPFRCKEVWAYHPDFTNVIEETWGS 266


>gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1739

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/107 (34%), Positives = 55/107 (51%)
 Frame = +3

Query: 6    FNSWINDLGLADLGFKGPKYTWNNNRNFGDHILERLDRALPTPEWLTVFPHVHVKTIANA 185
            F   +N+LGL D+G+ GP YTW+N +   D +LERLDR L   EW   +P+  V  +   
Sbjct: 932  FKHHVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPML 991

Query: 186  SSDHLSLHITLNKPNEMCPKPFRFYSMWLSDISCKPCIDNAWKSAMH 326
             SDH  +   LN  N    + F F + WL +        +AW  +++
Sbjct: 992  YSDHAPIIAILNPKNRRPKRSFMFENWWLLEPDFNQHAHSAWLQSVN 1038


>ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group]
           gi|255679325|dbj|BAH94828.1| Os10g0351414 [Oryza sativa
           Japonica Group]
          Length = 912

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/107 (34%), Positives = 55/107 (51%)
 Frame = +3

Query: 6   FNSWINDLGLADLGFKGPKYTWNNNRNFGDHILERLDRALPTPEWLTVFPHVHVKTIANA 185
           F   +N+LGL D+G+ GP YTW+N +   D +LERLDR L   EW   +P+  V  +   
Sbjct: 156 FKHHVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPML 215

Query: 186 SSDHLSLHITLNKPNEMCPKPFRFYSMWLSDISCKPCIDNAWKSAMH 326
            SDH  +   LN  N    + F F + WL +        +AW  +++
Sbjct: 216 YSDHAPIIAILNPKNRRPKRSFMFENWWLLEPDFNQHAHSAWLQSVN 262


>gb|EEE60843.1| hypothetical protein OsJ_14468 [Oryza sativa Japonica Group]
          Length = 1668

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/107 (34%), Positives = 55/107 (51%)
 Frame = +3

Query: 6    FNSWINDLGLADLGFKGPKYTWNNNRNFGDHILERLDRALPTPEWLTVFPHVHVKTIANA 185
            F   +N+LGL D+G+ GP YTW+N +   D +LERLDR L   EW   +P+  V  +   
Sbjct: 756  FKHHVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFDYPNTTVYHLPML 815

Query: 186  SSDHLSLHITLNKPNEMCPKPFRFYSMWLSDISCKPCIDNAWKSAMH 326
             SDH  +   LN  N    + F F + WL +        +AW  +++
Sbjct: 816  YSDHAPIIAILNPKNRRPKRSFMFENWWLLEPDFNQHAHSAWLQSVN 862


Top