BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021438
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635673.1| PREDICTED: probable NADH-ubiquinone oxidored...    89   3e-16
emb|CBI14826.3| unnamed protein product [Vitis vinifera]               89   3e-16
ref|XP_002274469.1| PREDICTED: external NADH-ubiquinone oxidored...    88   6e-16
emb|CAN59739.1| hypothetical protein VITISV_027063 [Vitis vinifera]    88   6e-16
emb|CAN66469.1| hypothetical protein VITISV_016566 [Vitis vinifera]    88   8e-16

>ref|XP_003635673.1| PREDICTED: probable NADH-ubiquinone oxidoreductase C3A11.07,
           mitochondrial, partial [Vitis vinifera]
          Length = 262

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 52/81 (64%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
 Frame = -2

Query: 232 SSGGIISYSESQSGHGVRTLEPSLRDVKKKE----GSGARYWMGRGISLLKDLNISSYDV 65
           S GG+++YSES+S  GVR+L  S  D KKK     G+G   W G   S LK+LN SSYDV
Sbjct: 18  SGGGLLAYSESKSYPGVRSLGSSEDDNKKKRVVVLGTG---WAGT--SFLKNLNNSSYDV 72

Query: 64  QVVSPRNYFAFTPLLPSVTCG 2
           QVVSPRNYFAFTPLLPSVTCG
Sbjct: 73  QVVSPRNYFAFTPLLPSVTCG 93


>emb|CBI14826.3| unnamed protein product [Vitis vinifera]
          Length = 218

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 52/81 (64%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
 Frame = -2

Query: 232 SSGGIISYSESQSGHGVRTLEPSLRDVKKKE----GSGARYWMGRGISLLKDLNISSYDV 65
           S GG+++YSES+S  GVR+L  S  D KKK     G+G   W G   S LK+LN SSYDV
Sbjct: 7   SGGGLLAYSESKSYPGVRSLGSSEDDNKKKRVVVLGTG---WAGT--SFLKNLNNSSYDV 61

Query: 64  QVVSPRNYFAFTPLLPSVTCG 2
           QVVSPRNYFAFTPLLPSVTCG
Sbjct: 62  QVVSPRNYFAFTPLLPSVTCG 82


>ref|XP_002274469.1| PREDICTED: external NADH-ubiquinone oxidoreductase 2, mitochondrial
           [Vitis vinifera] gi|296084969|emb|CBI28384.3| unnamed
           protein product [Vitis vinifera]
          Length = 577

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
 Frame = -2

Query: 232 SSGGIISYSESQSGHGVRTLEPSLRDVKKKE----GSGARYWMGRGISLLKDLNISSYDV 65
           SSGG+++YSESQ+  G ++ E   ++ +KK     G+G   W G   S LKDL+ISSYDV
Sbjct: 27  SSGGLVAYSESQTDAGAQSAEIKQKEPQKKRVVVLGTG---WAGT--SFLKDLDISSYDV 81

Query: 64  QVVSPRNYFAFTPLLPSVTCG 2
           +VVSPRNYFAFTPLLPSVTCG
Sbjct: 82  KVVSPRNYFAFTPLLPSVTCG 102


>emb|CAN59739.1| hypothetical protein VITISV_027063 [Vitis vinifera]
          Length = 578

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
 Frame = -2

Query: 232 SSGGIISYSESQSGHGVRTLEPSLRDVKKKE----GSGARYWMGRGISLLKDLNISSYDV 65
           SSGG+++YSESQ+  G ++ E   ++ +KK     G+G   W G   S LKDL+ISSYDV
Sbjct: 30  SSGGLVAYSESQTDAGAQSAEIKQKEPQKKRVVVLGTG---WAGT--SFLKDLDISSYDV 84

Query: 64  QVVSPRNYFAFTPLLPSVTCG 2
           +VVSPRNYFAFTPLLPSVTCG
Sbjct: 85  KVVSPRNYFAFTPLLPSVTCG 105


>emb|CAN66469.1| hypothetical protein VITISV_016566 [Vitis vinifera]
          Length = 618

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/81 (62%), Positives = 58/81 (71%), Gaps = 4/81 (4%)
 Frame = -2

Query: 232 SSGGIISYSESQSGHGVRTLEPSLRDVKKKE----GSGARYWMGRGISLLKDLNISSYDV 65
           S GG+++YSES+S  GVR+   S  D KKK     G+G   W G   S LK+LN SSYDV
Sbjct: 65  SGGGLLAYSESKSYPGVRSFGSSEDDNKKKRVVVLGTG---WAGT--SFLKNLNNSSYDV 119

Query: 64  QVVSPRNYFAFTPLLPSVTCG 2
           QVVSPRNYFAFTPLLPSVTCG
Sbjct: 120 QVVSPRNYFAFTPLLPSVTCG 140