BLASTX nr result

ID: Coptis25_contig00021437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021437
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263429.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [...   499   e-139
emb|CBI29367.3| unnamed protein product [Vitis vinifera]              441   e-121
gb|ACF87791.1| unknown [Zea mays]                                     404   e-110
ref|NP_001130803.1| uncharacterized protein LOC100191907 [Zea ma...   404   e-110
dbj|BAJ88442.1| predicted protein [Hordeum vulgare subsp. vulgare]    402   e-110

>ref|XP_002263429.1| PREDICTED: 3-ketoacyl-CoA synthase 11-like [Vitis vinifera]
          Length = 487

 Score =  499 bits (1284), Expect = e-139
 Identities = 241/334 (72%), Positives = 283/334 (84%)
 Frame = -2

Query: 1187 AFDEAEDGMFSAVDSLLYKTQVDPQSIDILIVTCGSFSPAPXXXXXLVNHYNLRSDIKTF 1008
            A DEA +GMFSA+D+LL KT++D   ID++I+T GSFSP+P     +VNHY L+ D+KTF
Sbjct: 153  AVDEAREGMFSAIDALLSKTRIDASRIDVVIITSGSFSPSPSLSSLVVNHYKLKPDVKTF 212

Query: 1007 NLSGMGCSSGVVSIDLAANILRSSTKKLYALVVITENISLNWYFGDDRSMLVTNCIFRVG 828
            NLSGMGCSSG++SIDLAA ILR+S K LYALVV+TE+ISLNWY G++RSMLVTNCIFRVG
Sbjct: 213  NLSGMGCSSGLISIDLAAKILRASRKSLYALVVVTESISLNWYCGNNRSMLVTNCIFRVG 272

Query: 827  CAAAMVTNDSNRRKDAKMELVKSLRTHHGANDSAYNAAVQKEDEKGTIGVSLTKDLIRVA 648
            CAAA++TND + R+ AKMEL  SLRTHHGANDSAY AA Q+ED+ GT GV+LTKDLIRVA
Sbjct: 273  CAAALMTNDQSLRRIAKMELTHSLRTHHGANDSAYKAAFQQEDDNGTTGVALTKDLIRVA 332

Query: 647  GLYLKDHITVFAPRVLPLSQLISFAYSVLLSGPSRGDTKPIVPDFTTVFDHMCIHTGGKA 468
            G+ L  HI   APRVLPL QL  + YSV+ S  S G++KPIVPDFTT F+H+CIHTGGKA
Sbjct: 333  GVNLHHHIKQLAPRVLPLCQLAHYLYSVITSTISGGESKPIVPDFTTAFEHLCIHTGGKA 392

Query: 467  VIDQVARVMRLNDDVTEPARMCLHRFGNTSSSLVFYELAYFEAKGRIKKGDKTWVLAFGT 288
            VI+QV RV++L+D VTEPARM LHRFGNTSSSLVFYELAYFEAKGR+KKGD+ W+LAFGT
Sbjct: 393  VIEQVGRVLKLSDSVTEPARMSLHRFGNTSSSLVFYELAYFEAKGRVKKGDRMWMLAFGT 452

Query: 287  GFKVCSLVFKSLRDSCKEPDNPWNDCIHRYPVKA 186
            GFKVCSL +K LRDS K+ DNPW DCIHRYPVKA
Sbjct: 453  GFKVCSLAWKCLRDSPKDYDNPWRDCIHRYPVKA 486


>emb|CBI29367.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  441 bits (1134), Expect = e-121
 Identities = 218/331 (65%), Positives = 258/331 (77%)
 Frame = -2

Query: 1187 AFDEAEDGMFSAVDSLLYKTQVDPQSIDILIVTCGSFSPAPXXXXXLVNHYNLRSDIKTF 1008
            A DEA +GMFSA+D+LL KT++D   ID++I+T GSFSP+P     +VNHY L+ D+KTF
Sbjct: 143  AVDEAREGMFSAIDALLSKTRIDASRIDVVIITSGSFSPSPSLSSLVVNHYKLKPDVKTF 202

Query: 1007 NLSGMGCSSGVVSIDLAANILRSSTKKLYALVVITENISLNWYFGDDRSMLVTNCIFRVG 828
            NLSGMGCSSG++SIDLAA ILR+S K LYALVV+TE+ISLNWY G++RSMLVTNCIFRVG
Sbjct: 203  NLSGMGCSSGLISIDLAAKILRASRKSLYALVVVTESISLNWYCGNNRSMLVTNCIFRVG 262

Query: 827  CAAAMVTNDSNRRKDAKMELVKSLRTHHGANDSAYNAAVQKEDEKGTIGVSLTKDLIRVA 648
            CAAA++TND                            A Q+ED+ GT GV+LTKDLIRVA
Sbjct: 263  CAAALMTNDQT--------------------------AFQQEDDNGTTGVALTKDLIRVA 296

Query: 647  GLYLKDHITVFAPRVLPLSQLISFAYSVLLSGPSRGDTKPIVPDFTTVFDHMCIHTGGKA 468
            G+ L  HI   APRVLPL QL  + YSV+ S  S G++KPIVPDFTT F+H+CIHTGGKA
Sbjct: 297  GVNLHHHIKQLAPRVLPLCQLAHYLYSVITSTISGGESKPIVPDFTTAFEHLCIHTGGKA 356

Query: 467  VIDQVARVMRLNDDVTEPARMCLHRFGNTSSSLVFYELAYFEAKGRIKKGDKTWVLAFGT 288
            VI+QV RV++L+D VTEPARM LHRFGNTSSSLVFYELAYFEAKGR+KKGD+ W+LAFGT
Sbjct: 357  VIEQVGRVLKLSDSVTEPARMSLHRFGNTSSSLVFYELAYFEAKGRVKKGDRMWMLAFGT 416

Query: 287  GFKVCSLVFKSLRDSCKEPDNPWNDCIHRYP 195
            GFKVCSL +K LRDS K+ DNPW DCIHRYP
Sbjct: 417  GFKVCSLAWKCLRDSPKDYDNPWRDCIHRYP 447


>gb|ACF87791.1| unknown [Zea mays]
          Length = 452

 Score =  404 bits (1037), Expect = e-110
 Identities = 194/338 (57%), Positives = 254/338 (75%), Gaps = 3/338 (0%)
 Frame = -2

Query: 1196 LKSAFDEAEDGMFSAVDSLLYKTQVDPQSIDILIVTCGSFSPAPXXXXXLVNHYNLRSDI 1017
            L  A  EAE+G+F+ V+ LL K+ V P  I +L+V C  FSP P     +++ +N+R D+
Sbjct: 104  LAFAIQEAEEGLFAVVEQLLAKSDVSPSDISVLVVACSMFSPMPSLASMIMHRFNMRPDV 163

Query: 1016 KTFNLSGMGCSSGVVSIDLAANILRSSTKKLYALVVITENISLNWYFGDDRSMLVTNCIF 837
            K+++++GMGCS+G V ID AA  LRS     YALVV+TEN SLNWYFG ++ MLVTNCIF
Sbjct: 164  KSYSVAGMGCSAGTVGIDTAARSLRSRRTPGYALVVVTENTSLNWYFGKNKHMLVTNCIF 223

Query: 836  RVGCAAAMVTNDSNRRKDAKMELVKSLRTHHGANDSAYNAAVQKEDEKGTIGVSLTKDLI 657
            RVG AAA+VT+  +RR DAK ELV++LRTHHGA+D+A+NAA+Q EDE+G +GV+LTKDL+
Sbjct: 224  RVGSAAALVTDVPSRRPDAKYELVRTLRTHHGADDAAFNAALQMEDEEGNLGVALTKDLV 283

Query: 656  RVAGLYLKDHITVFAPRVLPLSQLISFAYSVLLSGPSRGDTKPI---VPDFTTVFDHMCI 486
            RVAG  L+ HIT   P+VLP+S+++ +A+ V     + G++K     VPDF   F+H CI
Sbjct: 284  RVAGAALRRHITTLGPQVLPVSEMLRYAWRV-ARAYAAGNSKAAAAEVPDFQRAFEHFCI 342

Query: 485  HTGGKAVIDQVARVMRLNDDVTEPARMCLHRFGNTSSSLVFYELAYFEAKGRIKKGDKTW 306
            H+GGKAVID +AR+M     V EPAR  LHRFGNTSSSLVFYELAYFEAK R++ GD+ W
Sbjct: 343  HSGGKAVIDSIARLMGFGPYVVEPARSTLHRFGNTSSSLVFYELAYFEAKRRVRAGDRLW 402

Query: 305  VLAFGTGFKVCSLVFKSLRDSCKEPDNPWNDCIHRYPV 192
            +LAFGTGFK CS V+++LRD+  + DNPWN C+HRYPV
Sbjct: 403  MLAFGTGFKACSNVWRALRDAAPDADNPWNGCVHRYPV 440


>ref|NP_001130803.1| uncharacterized protein LOC100191907 [Zea mays]
            gi|194690152|gb|ACF79160.1| unknown [Zea mays]
            gi|223949629|gb|ACN28898.1| unknown [Zea mays]
            gi|223949861|gb|ACN29014.1| unknown [Zea mays]
            gi|224031191|gb|ACN34671.1| unknown [Zea mays]
            gi|414885137|tpg|DAA61151.1| TPA: hypothetical protein
            ZEAMMB73_129897 [Zea mays]
          Length = 468

 Score =  404 bits (1037), Expect = e-110
 Identities = 194/338 (57%), Positives = 254/338 (75%), Gaps = 3/338 (0%)
 Frame = -2

Query: 1196 LKSAFDEAEDGMFSAVDSLLYKTQVDPQSIDILIVTCGSFSPAPXXXXXLVNHYNLRSDI 1017
            L  A  EAE+G+F+ V+ LL K+ V P  I +L+V C  FSP P     +++ +N+R D+
Sbjct: 120  LAFAIQEAEEGLFAVVEQLLAKSDVSPSDISVLVVACSMFSPMPSLASMIMHRFNMRPDV 179

Query: 1016 KTFNLSGMGCSSGVVSIDLAANILRSSTKKLYALVVITENISLNWYFGDDRSMLVTNCIF 837
            K+++++GMGCS+G V ID AA  LRS     YALVV+TEN SLNWYFG ++ MLVTNCIF
Sbjct: 180  KSYSVAGMGCSAGTVGIDTAARSLRSRRTPGYALVVVTENTSLNWYFGKNKHMLVTNCIF 239

Query: 836  RVGCAAAMVTNDSNRRKDAKMELVKSLRTHHGANDSAYNAAVQKEDEKGTIGVSLTKDLI 657
            RVG AAA+VT+  +RR DAK ELV++LRTHHGA+D+A+NAA+Q EDE+G +GV+LTKDL+
Sbjct: 240  RVGSAAALVTDVPSRRPDAKYELVRTLRTHHGADDAAFNAALQMEDEEGNLGVALTKDLV 299

Query: 656  RVAGLYLKDHITVFAPRVLPLSQLISFAYSVLLSGPSRGDTKPI---VPDFTTVFDHMCI 486
            RVAG  L+ HIT   P+VLP+S+++ +A+ V     + G++K     VPDF   F+H CI
Sbjct: 300  RVAGAALRRHITTLGPQVLPVSEMLRYAWRV-ARAYAAGNSKAAAAEVPDFQRAFEHFCI 358

Query: 485  HTGGKAVIDQVARVMRLNDDVTEPARMCLHRFGNTSSSLVFYELAYFEAKGRIKKGDKTW 306
            H+GGKAVID +AR+M     V EPAR  LHRFGNTSSSLVFYELAYFEAK R++ GD+ W
Sbjct: 359  HSGGKAVIDSIARLMGFGPYVVEPARSTLHRFGNTSSSLVFYELAYFEAKRRVRAGDRLW 418

Query: 305  VLAFGTGFKVCSLVFKSLRDSCKEPDNPWNDCIHRYPV 192
            +LAFGTGFK CS V+++LRD+  + DNPWN C+HRYPV
Sbjct: 419  MLAFGTGFKACSNVWRALRDAAPDADNPWNGCVHRYPV 456


>dbj|BAJ88442.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 484

 Score =  402 bits (1033), Expect = e-110
 Identities = 191/337 (56%), Positives = 249/337 (73%), Gaps = 2/337 (0%)
 Frame = -2

Query: 1196 LKSAFDEAEDGMFSAVDSLLYKTQVDPQSIDILIVTCGSFSPAPXXXXXLVNHYNLRSDI 1017
            L  A  EAE+G+F+ V  LL K+ V P+ + +L+V C  +SP P     +V  + ++ D+
Sbjct: 115  LAFAIQEAEEGLFTVVSQLLAKSDVSPRDVSVLVVACSMYSPQPSLASMIVRRFKMKDDV 174

Query: 1016 KTFNLSGMGCSSGVVSIDLAANILRSSTKKLYALVVITENISLNWYFGDDRSMLVTNCIF 837
            K ++ +GMGCS+G V ID+AA +LR   +  YALVV+TEN SLNWYFG+++ MLVTNCIF
Sbjct: 175  KAYSFAGMGCSAGTVGIDMAARLLRVQRRPGYALVVVTENTSLNWYFGNNKHMLVTNCIF 234

Query: 836  RVGCAAAMVTNDSNRRKDAKMELVKSLRTHHGANDSAYNAAVQKEDEKGTIGVSLTKDLI 657
            RVG AAA++T+   RR DAK +L+++LRTHHGA+D+AYNAAVQ EDE G +GV+LTKDL+
Sbjct: 235  RVGSAAALITDVPARRADAKYQLLRTLRTHHGADDAAYNAAVQMEDEDGGVGVALTKDLV 294

Query: 656  RVAGLYLKDHITVFAPRVLPLSQLISFAYSV--LLSGPSRGDTKPIVPDFTTVFDHMCIH 483
            RVAG  L+ HI   AP VLP+S+L+ + Y V    SG +      +VPDF   F+HMCIH
Sbjct: 295  RVAGAGLRSHIATLAPYVLPVSELLRYVYRVAWAYSGGNPKAAAGLVPDFQRAFEHMCIH 354

Query: 482  TGGKAVIDQVARVMRLNDDVTEPARMCLHRFGNTSSSLVFYELAYFEAKGRIKKGDKTWV 303
            +GGKAVID VA++M     V EPAR  LHRFGNTSSSLVFYELAYFEAK R++ GD+ W+
Sbjct: 355  SGGKAVIDTVAKLMGFGPPVVEPARATLHRFGNTSSSLVFYELAYFEAKRRVRAGDRLWM 414

Query: 302  LAFGTGFKVCSLVFKSLRDSCKEPDNPWNDCIHRYPV 192
            LAFGTGFK CS+V+++LRDS  + DNPWN C HRYP+
Sbjct: 415  LAFGTGFKACSVVWRALRDSGPDADNPWNGCAHRYPM 451


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