BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021436
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]                   125   1e-26
ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform...   123   7e-26
ref|XP_002510134.1| cyclin A, putative [Ricinus communis] gi|223...   120   6e-25
emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]             117   4e-24
ref|XP_004159935.1| PREDICTED: cyclin-A3-2-like [Cucumis sativus]     114   4e-23

>dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]
          Length = 372

 Score =  125 bits (314), Expect = 1e-26
 Identities = 55/86 (63%), Positives = 72/86 (83%)
 Frame = +3

Query: 480 LPSSVIFLTNFTLLPKMHPWKATLQLQSGYRPSDLKDCVLAIHDLQLYRKGSTLASIRDK 659
           + SSVIFL+ FTL PK+HPW + LQ  SGY+P+DLK+CVL IHDLQL ++GS+L ++RDK
Sbjct: 287 IASSVIFLSRFTLQPKVHPWNSLLQHNSGYKPADLKECVLIIHDLQLSKRGSSLVAVRDK 346

Query: 660 *KQHKFKCVATMTSPSKIPQEYFEDM 737
            KQHKFKCV+T+T+P  IP E+FED+
Sbjct: 347 YKQHKFKCVSTLTAPPSIPDEFFEDI 372


>ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform 1 [Vitis vinifera]
           gi|302142243|emb|CBI19446.3| unnamed protein product
           [Vitis vinifera]
          Length = 365

 Score =  123 bits (308), Expect = 7e-26
 Identities = 56/85 (65%), Positives = 71/85 (83%)
 Frame = +3

Query: 486 SSVIFLTNFTLLPKMHPWKATLQLQSGYRPSDLKDCVLAIHDLQLYRKGSTLASIRDK*K 665
           +SVIFL+ FTL PK HPW ++LQ  SGY+PS+LK+CVL IHDLQL R+G +L ++R+K K
Sbjct: 280 ASVIFLSRFTLRPKTHPWCSSLQHHSGYKPSELKECVLIIHDLQLSRRGGSLVAVREKYK 339

Query: 666 QHKFKCVATMTSPSKIPQEYFEDMK 740
           QHKFKCVAT++SPS IP  YFED+K
Sbjct: 340 QHKFKCVATLSSPSVIPVSYFEDIK 364


>ref|XP_002510134.1| cyclin A, putative [Ricinus communis] gi|223550835|gb|EEF52321.1|
           cyclin A, putative [Ricinus communis]
          Length = 373

 Score =  120 bits (300), Expect = 6e-25
 Identities = 56/82 (68%), Positives = 64/82 (78%)
 Frame = +3

Query: 486 SSVIFLTNFTLLPKMHPWKATLQLQSGYRPSDLKDCVLAIHDLQLYRKGSTLASIRDK*K 665
           SSVIFL  F + PKMHPW +TLQ  SGYRPSDLK+CVL IHDL L R+G  L ++R+K K
Sbjct: 288 SSVIFLARFMIKPKMHPWSSTLQQHSGYRPSDLKECVLIIHDLYLSRRGGGLQAVREKYK 347

Query: 666 QHKFKCVATMTSPSKIPQEYFE 731
           QHKFKCVATM SP +IP  YFE
Sbjct: 348 QHKFKCVATMPSPPEIPAAYFE 369


>emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 384

 Score =  117 bits (293), Expect = 4e-24
 Identities = 50/88 (56%), Positives = 70/88 (79%)
 Frame = +3

Query: 480 LPSSVIFLTNFTLLPKMHPWKATLQLQSGYRPSDLKDCVLAIHDLQLYRKGSTLASIRDK 659
           L ++V+FL+ FTL P  HPW   LQ  SGY+ +DLK+C+L +HDLQL R+G +LA++RDK
Sbjct: 296 LAAAVVFLSRFTLQPNTHPWSLALQQYSGYKAADLKECILILHDLQLSRRGGSLAAVRDK 355

Query: 660 *KQHKFKCVATMTSPSKIPQEYFEDMKR 743
            KQHKFKCV+++TSP +IP  +FEDM++
Sbjct: 356 YKQHKFKCVSSLTSPVEIPASFFEDMRQ 383


>ref|XP_004159935.1| PREDICTED: cyclin-A3-2-like [Cucumis sativus]
          Length = 443

 Score =  114 bits (284), Expect = 4e-23
 Identities = 52/87 (59%), Positives = 70/87 (80%)
 Frame = +3

Query: 477 ELPSSVIFLTNFTLLPKMHPWKATLQLQSGYRPSDLKDCVLAIHDLQLYRKGSTLASIRD 656
           ++ +S IFL+ FT+ P+ HPW   LQ  SGYR S+LK+C+LAIHDLQL RKGS+L +IR+
Sbjct: 346 KVAASAIFLSRFTIQPEEHPWCLALQRYSGYRASELKECILAIHDLQLNRKGSSLLAIRE 405

Query: 657 K*KQHKFKCVATMTSPSKIPQEYFEDM 737
           K K++KFKCVA + SPS+IP +YFED+
Sbjct: 406 KYKENKFKCVAELCSPSEIPADYFEDI 432