BLASTX nr result

ID: Coptis25_contig00021429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021429
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...   138   1e-30
ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...   127   3e-27
emb|CBI17182.3| unnamed protein product [Vitis vinifera]              122   1e-25
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   119   9e-25
ref|XP_002525325.1| ATP binding protein, putative [Ricinus commu...   117   3e-24

>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1093

 Score =  138 bits (348), Expect = 1e-30
 Identities = 97/269 (36%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
 Frame = +3

Query: 99  SFVSASLQVLLEKLADLGISVYKSIGEFDDKLKKLERTLKRVQFLIHEAEEKQLLSDMEW 278
           +F+SA+LQV LE LA   +  + +    D  LKKL RTL ++Q ++++AE +Q ++DM  
Sbjct: 8   AFLSATLQVALENLASPILREFGARIGIDKDLKKLTRTLAKIQAVLNDAEARQ-INDMAV 66

Query: 279 KGLLQDLEQVAYDADDLVDEIAXXXXXXXXXXXXXNQDQVTKLLSS-----LFKCSSAPN 443
           K  L DL++VAYDADD++DE+A             NQ++    L S     LFK   AP 
Sbjct: 67  KLWLSDLKEVAYDADDVLDEVA-------TEAFRFNQEKKASSLISLSKDFLFKLGLAPK 119

Query: 444 LSNIQAKXXXXXXXXXXXSQRRTRHDT-----VKYKLQTTSFVDESRVFGREADKSNVEQ 608
           +  I  +             R     T      + +LQT+S +DES VFGR+ DK  +  
Sbjct: 120 IKEINERLDEIAKERDELGLREGAGATWIETRDRERLQTSSLIDESCVFGRKEDKKEIVN 179

Query: 609 ILLAXXXXXXXXRKGNDVVSVVPIVGMAGVGKTTLAQLLYNHDYVYHQRTKKIFNLFPFS 788
           +L++          GND V V+PIVGM G+GKTTLAQL++N + V               
Sbjct: 180 LLVSDDYC------GND-VGVLPIVGMGGLGKTTLAQLVFNDETV--------------- 217

Query: 789 PKQQAHFNLKMWISVTEDFDVMKLTRSMI 875
                HF+LKMW+ V++DF+  +LT+S++
Sbjct: 218 ---ARHFDLKMWVCVSDDFNAQRLTKSIL 243


>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223548089|gb|EEF49581.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score =  127 bits (319), Expect = 3e-27
 Identities = 88/266 (33%), Positives = 139/266 (52%), Gaps = 7/266 (2%)
 Frame = +3

Query: 99  SFVSASLQVLLEKLADLGISVYKSIGEFDDKLKKLERTLKRVQFLIHEAEEKQLLSDMEW 278
           +F+SA+ Q+ L  LA   +  +      D  L+KL R L ++Q ++++AE KQ+ +D   
Sbjct: 7   AFLSAAFQIALGHLASPILREFGCRFGIDKDLRKLTRNLSKIQAVLNDAEAKQI-TDYSV 65

Query: 279 KGLLQDLEQVAYDADDLVDEIAXXXXXXXXXXXXXNQDQVTKLLSS-LFKCSSAPNLSNI 455
           K  L +L++VAYDADD++DE++              Q +VT L S  +FK   AP +  I
Sbjct: 66  KLWLNELKEVAYDADDVLDEVSTQAFRYN------QQKKVTNLFSDFMFKYELAPKIKEI 119

Query: 456 QAKXXXXXXXXXXXSQRRTRHDTV-----KYKLQTTSFVDESRVFGREADKSNVEQILLA 620
             +             +     T+     + +LQT+S +DESRVFGR  D+  + ++L++
Sbjct: 120 NERLDEIAKQRNDLDLKEGTRVTLTETRDRDRLQTSSLIDESRVFGRTDDQKKLVELLVS 179

Query: 621 XXXXXXXXRKGNDV-VSVVPIVGMAGVGKTTLAQLLYNHDYVYHQRTKKIFNLFPFSPKQ 797
                     GND  V VVPI+GM G+GKTTLAQL+YN                   P  
Sbjct: 180 DE------NSGNDAGVGVVPIIGMGGLGKTTLAQLVYN------------------DPLV 215

Query: 798 QAHFNLKMWISVTEDFDVMKLTRSMI 875
              F LK WI V+++F+V+++T+S++
Sbjct: 216 AEKFELKTWICVSDEFNVLRVTKSIL 241


>emb|CBI17182.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score =  122 bits (305), Expect = 1e-25
 Identities = 79/261 (30%), Positives = 134/261 (51%), Gaps = 2/261 (0%)
 Frame = +3

Query: 99  SFVSASLQVLLEKLADLGISVYKSIGEFDDKLKKLERTLKRVQFLIHEAEEKQLLSDMEW 278
           +F+SA LQVL ++LA   +     I   D +LKKL+ TL ++Q ++++AE KQ+ ++   
Sbjct: 6   AFLSAFLQVLFDRLASPELLKIAQIWRVDVELKKLKGTLLKIQAVLNDAELKQVWNNAV- 64

Query: 279 KGLLQDLEQVAYDADDLVDEIAXXXXXXXXXXXXXNQDQVTKLLSSLFKCSSAPNLSNIQ 458
           +  L+DL+ +AYD +D+VDE                     ++ +  +K  + P     Q
Sbjct: 65  RIWLEDLKHLAYDVEDIVDEF--------------------EIEALRWKLEAEPQFDPTQ 104

Query: 459 AKXXXXXXXXXXXSQRRTRHDT--VKYKLQTTSFVDESRVFGREADKSNVEQILLAXXXX 632
                         + +T  +T  +  +  T+S V++SR+ GREADK  +  +LL+    
Sbjct: 105 VWPLIPFRRKDLGLKEKTERNTYGISQRPATSSLVNKSRIVGREADKQKLVDLLLSNDTS 164

Query: 633 XXXXRKGNDVVSVVPIVGMAGVGKTTLAQLLYNHDYVYHQRTKKIFNLFPFSPKQQAHFN 812
                +  D V ++P+ GM G+GKTT+AQL+YN + V  Q                  F 
Sbjct: 165 EGEVCRNGDKVFIIPVSGMGGIGKTTIAQLVYNEERVIQQ------------------FE 206

Query: 813 LKMWISVTEDFDVMKLTRSMI 875
           LK W+ V+E+FD+M++TRS++
Sbjct: 207 LKAWVCVSEEFDLMRVTRSIL 227


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 1091

 Score =  119 bits (298), Expect = 9e-25
 Identities = 86/260 (33%), Positives = 131/260 (50%), Gaps = 2/260 (0%)
 Frame = +3

Query: 102 FVSASLQVLLEKLAD-LGISVYKSIGEFDDKLKKLERTLKRVQFLIHEAEEKQLLSDMEW 278
           F+SA+ Q+ LEKLA  +   + K  G+    LKKL RTL ++Q ++ +AE +Q+ ++   
Sbjct: 7   FLSAAFQITLEKLASPMSKELEKRFGD----LKKLTRTLSKIQAVLSDAEARQI-TNAAV 61

Query: 279 KGLLQDLEQVAYDADDLVDEIAXXXXXXXXXXXXXNQDQVTKLLSSLFKCSSAPNLSNIQ 458
           K  L D+E+VAYDA+D+++E+              N       LS  F+      L  I 
Sbjct: 62  KLWLGDVEEVAYDAEDVLEEVMTEASRLKLQ----NPVSYLSSLSRDFQLEIRSKLEKIN 117

Query: 459 AKXXXXXXXXXXXSQRRTRHDTVKYKL-QTTSFVDESRVFGREADKSNVEQILLAXXXXX 635
            +             R    +    K  Q++S V+ESRV GRE +K  + ++L++     
Sbjct: 118 ERLDEIEKERDGLGLREISGEKRNNKRPQSSSLVEESRVLGREVEKEEIVELLVSDEY-- 175

Query: 636 XXXRKGNDVVSVVPIVGMAGVGKTTLAQLLYNHDYVYHQRTKKIFNLFPFSPKQQAHFNL 815
                G   V V+PIVGM G+GKTTLAQL+YN +                  K   HF L
Sbjct: 176 -----GGSDVCVIPIVGMGGLGKTTLAQLVYNDE------------------KVTKHFEL 212

Query: 816 KMWISVTEDFDVMKLTRSMI 875
           KMW+ V++DFDV + T+S++
Sbjct: 213 KMWVCVSDDFDVRRATKSVL 232


>ref|XP_002525325.1| ATP binding protein, putative [Ricinus communis]
           gi|223535384|gb|EEF37058.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 657

 Score =  117 bits (293), Expect = 3e-24
 Identities = 92/272 (33%), Positives = 139/272 (51%), Gaps = 14/272 (5%)
 Frame = +3

Query: 99  SFVSASLQVLLEKLADLG-ISVYKSIGEFDDKLKKLERTLKRVQFLIHEAEEKQLLSDME 275
           +F+SA LQVL +++A    I ++KS    + +LKKL+  L  V  ++ +AEEKQ+ +++ 
Sbjct: 8   AFLSAFLQVLFDRIASREFIGLFKSRSHKNGQLKKLKTMLMSVNGILDDAEEKQI-TNIF 66

Query: 276 WKGLLQDLEQVAYDADDLVDEIAXXXXXXXXXXXXX--NQDQVTKLLSSLFKCSSAPNLS 449
            K  L DL+ V Y+ADD +DEIA               ++DQV K  S L     +P   
Sbjct: 67  VKQWLNDLKDVVYEADDCLDEIAYKVLRLELEVGSKTSSKDQVRKFFSFL-----SPFKD 121

Query: 450 NIQAKXXXXXXXXXXXSQRRTRHDTV----------KYKLQTTSFVDESRVFGREADKSN 599
            I+AK            ++++    +            K+ TTS +DE  +FGRE DK  
Sbjct: 122 EIEAKLEEILERLEYLVKQKSALGLIMKEGIEQKLSSQKIPTTSLLDEYGIFGREDDKEA 181

Query: 600 VEQILLAXXXXXXXXRKGNDV-VSVVPIVGMAGVGKTTLAQLLYNHDYVYHQRTKKIFNL 776
           + ++L+           GN   +SV+PIVGM G+GKTTLAQLLYN   V           
Sbjct: 182 IIKLLVDD---------GNTTDLSVIPIVGMGGIGKTTLAQLLYNDTRV----------- 221

Query: 777 FPFSPKQQAHFNLKMWISVTEDFDVMKLTRSM 872
                  Q  F+LK WI V+++FDV+K+T+ +
Sbjct: 222 -------QGWFDLKGWIYVSKEFDVLKVTKDI 246


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