BLASTX nr result

ID: Coptis25_contig00021428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021428
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera]   149   3e-34
emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera]   145   5e-33
ref|XP_002273591.2| PREDICTED: uncharacterized protein LOC100254...   145   6e-33
emb|CAN83725.1| hypothetical protein VITISV_037053 [Vitis vinifera]   145   8e-33
emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]   144   1e-32

>emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera]
          Length = 1802

 Score =  149 bits (377), Expect = 3e-34
 Identities = 83/215 (38%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
 Frame = +3

Query: 21   MSIKFVS*NLRGLGNDETCNNLRLLIRNHSPVILLLQETKLGEGQHSILGDLWR-QPWEY 197
            + IK +S N RGLG+ +    ++  +R+  P I+++QETK  E     +G LW  +  E+
Sbjct: 778  LDIKIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSLWTARNKEW 837

Query: 198  VCVPAMGLSGLSGGVMVAWNSDLVEVIDSLFGAYSLSVKCNLKTNGLSWLMTGVYGPNDD 377
              +PA G SG   G++V W+S  +   + + G++S+SVK  +  +   WL + VYGPN  
Sbjct: 838  AVLPACGASG---GILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWL-SAVYGPNST 893

Query: 378  SSRTHFLNELEDIRAWSDLPWCIGGDFNIIRFSHERSGGSRLTKYMRKFDDFVSRNCLVD 557
            + R  F  EL DI   S   WC+GGDFN+IR   E+ GG RLT  M+  DDF+  N L+D
Sbjct: 894  ALRKDFWEELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELID 953

Query: 558  YPLNGALYTWADRRS---LSRIDRFHVSVEWDEQF 653
             PL  A +TW++ +      R+DRF  S EW++ F
Sbjct: 954  PPLRSASFTWSNMQEHPVCKRLDRFLYSNEWEQLF 988


>emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera]
          Length = 1532

 Score =  145 bits (367), Expect = 5e-33
 Identities = 82/212 (38%), Positives = 123/212 (58%), Gaps = 4/212 (1%)
 Frame = +3

Query: 30   KFVS*NLRGLGNDETCNNLRLLIRNHSPVILLLQETKLGEGQHSILGDLWR-QPWEYVCV 206
            K +S N RGLG+ +    ++  +R+  P I+++QETK  E     +G +W  +  E+V +
Sbjct: 508  KIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSVWTARNKEWVVL 567

Query: 207  PAMGLSGLSGGVMVAWNSDLVEVIDSLFGAYSLSVKCNLKTNGLSWLMTGVYGPNDDSSR 386
            PA G SG   G++V W+S  +   + + G++S+SVK  +  +   WL + VYGPN  + R
Sbjct: 568  PACGASG---GILVIWDSKKLLSEEVVLGSFSVSVKFAMDGSEQFWL-SAVYGPNSTALR 623

Query: 387  THFLNELEDIRAWSDLPWCIGGDFNIIRFSHERSGGSRLTKYMRKFDDFVSRNCLVDYPL 566
              F  EL DI   S   WC+GGDFN+IR   E+ GG RLT  M+  DDF+  N L+D PL
Sbjct: 624  KDFWVELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELIDPPL 683

Query: 567  NGALYTWADRRS---LSRIDRFHVSVEWDEQF 653
              A +TW++ +      R+DRF  S EW++ F
Sbjct: 684  RSASFTWSNMQEHPVCKRLDRFLYSNEWEQLF 715


>ref|XP_002273591.2| PREDICTED: uncharacterized protein LOC100254784 [Vitis vinifera]
          Length = 2201

 Score =  145 bits (366), Expect = 6e-33
 Identities = 81/210 (38%), Positives = 121/210 (57%), Gaps = 4/210 (1%)
 Frame = +3

Query: 36   VS*NLRGLGNDETCNNLRLLIRNHSPVILLLQETKLGEGQHSILGDLWR-QPWEYVCVPA 212
            +S N RGLG+ +    ++  +R+  P I+++QETK  E     +G LW  +  E+  +PA
Sbjct: 1342 ISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSLWTARNKEWAVLPA 1401

Query: 213  MGLSGLSGGVMVAWNSDLVEVIDSLFGAYSLSVKCNLKTNGLSWLMTGVYGPNDDSSRTH 392
             G SG   G++V W+S  +   + + G++S+SVK  +  +   WL + VYGPN  + R  
Sbjct: 1402 CGASG---GILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWL-SAVYGPNSTALRKD 1457

Query: 393  FLNELEDIRAWSDLPWCIGGDFNIIRFSHERSGGSRLTKYMRKFDDFVSRNCLVDYPLNG 572
            F  EL DI   S   WC+GGDFN+IR   E+ GG RLT  M+  DDF+  N L+D PL  
Sbjct: 1458 FWEELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELIDPPLRS 1517

Query: 573  ALYTWADRRS---LSRIDRFHVSVEWDEQF 653
            A +TW++ +      R+DRF  S EW++ F
Sbjct: 1518 ASFTWSNMQEHPVCKRLDRFLYSNEWEQLF 1547


>emb|CAN83725.1| hypothetical protein VITISV_037053 [Vitis vinifera]
          Length = 1726

 Score =  145 bits (365), Expect = 8e-33
 Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 4/212 (1%)
 Frame = +3

Query: 30   KFVS*NLRGLGNDETCNNLRLLIRNHSPVILLLQETKLGEGQHSILGDLWR-QPWEYVCV 206
            K +S N RGLG+ +    +R  +   +P +++LQETK        +  +W+ +  ++V +
Sbjct: 725  KILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMLQETKREIWDRRXVSSVWKGKSLDWVAL 784

Query: 207  PAMGLSGLSGGVMVAWNSDLVEVIDSLFGAYSLSVKCNLKTNGLSWLMTGVYGPNDDSSR 386
            PA G SG   G+++ W+S      + + G +S++VK N    G  WL T VYGPN    R
Sbjct: 785  PACGASG---GIVILWDSXKFXCSEKVLGXFSVTVKLNSXEEGFFWL-TSVYGPNKAVXR 840

Query: 387  THFLNELEDIRAWSDLPWCIGGDFNIIRFSHERSGGSRLTKYMRKFDDFVSRNCLVDYPL 566
              F  EL+D+   +   WC+GGDFN+I+   ER G SRLT  MR FD+F+  + L+D PL
Sbjct: 841  KDFWMELQDLHGLTSPRWCVGGDFNVIKRMSERMGDSRLTVNMRCFDEFIKESGLLDPPL 900

Query: 567  NGALYTWADRR---SLSRIDRFHVSVEWDEQF 653
              A +TW++ +      R+DRF  S EWD  F
Sbjct: 901  RNAAFTWSNMQVDPICKRLDRFLFSSEWDSFF 932


>emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]
          Length = 1765

 Score =  144 bits (364), Expect = 1e-32
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 4/212 (1%)
 Frame = +3

Query: 30  KFVS*NLRGLGNDETCNNLRLLIRNHSPVILLLQETKLGEGQHSILGDLWR-QPWEYVCV 206
           K +S N RGLG+ +    ++  +R+  P I+++QETK  E     +G +W  +  E+  +
Sbjct: 113 KIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSVWTARNKEWAVL 172

Query: 207 PAMGLSGLSGGVMVAWNSDLVEVIDSLFGAYSLSVKCNLKTNGLSWLMTGVYGPNDDSSR 386
           PA G SG   G++V W+S  +   + + G++S+SVK  +  +   W+ + VYGPN  + R
Sbjct: 173 PACGASG---GILVIWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWJ-SAVYGPNSTALR 228

Query: 387 THFLNELEDIRAWSDLPWCIGGDFNIIRFSHERSGGSRLTKYMRKFDDFVSRNCLVDYPL 566
             F  EL DI   S   WC+GGDFN+IR   E+ GG RLT  M+  DDF+  N L+D PL
Sbjct: 229 KDFWVELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELIDPPL 288

Query: 567 NGALYTWADRRS---LSRIDRFHVSVEWDEQF 653
             A +TW++ +      R+DRF  S EW++ F
Sbjct: 289 RSASFTWSNMQEHPVCKRLDRFLYSNEWEQLF 320


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