BLASTX nr result

ID: Coptis25_contig00021418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021418
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH08806.1| chloroplast Fe-superoxide dismutase 2D-a [Prunus ...    97   1e-18
gb|AFG22595.1| chloroplast Fe-superoxide dismutase 1B-a [Prunus ...    97   1e-18
gb|AFH08803.1| chloroplast Fe-superoxide dismutase 2A-a [Prunus ...    96   2e-18
gb|AEY78522.2| chloroplast Fe superoxide dismutase [Prunus persi...    96   2e-18
gb|AFG19618.1| iron superoxide dismutase 2, partial [Litchi chin...    96   3e-18

>gb|AFH08806.1| chloroplast Fe-superoxide dismutase 2D-a [Prunus persica]
           gi|383386089|gb|AFH08808.1| chloroplast Fe-superoxide
           dismutase 2D-b [Prunus persica]
          Length = 320

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/88 (53%), Positives = 57/88 (64%)
 Frame = -2

Query: 457 PLVWDYSPLLTIDVWEHAYYIDYENRKADYILTFMEKFVSWEMVSLRLEMAKAXXXXXXX 278
           PL+WDYSPLLTIDVWEHAYY+D++NR+ADYI  F+EK VSWE VS RLE+AKA       
Sbjct: 228 PLIWDYSPLLTIDVWEHAYYLDFQNRRADYISIFLEKLVSWEAVSFRLEIAKARAAEREE 287

Query: 277 XXXXXXXXEGDNISDNVDGESMSDNEDE 194
                   E +  SD    E   DN+ +
Sbjct: 288 AEERKKREEEEKTSDGEVEEIYVDNKSD 315


>gb|AFG22595.1| chloroplast Fe-superoxide dismutase 1B-a [Prunus persica]
           gi|383386087|gb|AFH08807.1| chloroplast Fe-superoxide
           dismutase 1B-b [Prunus persica]
          Length = 319

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/88 (53%), Positives = 57/88 (64%)
 Frame = -2

Query: 457 PLVWDYSPLLTIDVWEHAYYIDYENRKADYILTFMEKFVSWEMVSLRLEMAKAXXXXXXX 278
           PL+WDYSPLLTIDVWEHAYY+D++NR+ADYI  F+EK VSWE VS RLE+AKA       
Sbjct: 227 PLIWDYSPLLTIDVWEHAYYLDFQNRRADYISIFLEKLVSWEAVSFRLEIAKARAAEREE 286

Query: 277 XXXXXXXXEGDNISDNVDGESMSDNEDE 194
                   E +  SD    E   DN+ +
Sbjct: 287 AEERKKREEEEKTSDGEVEEIYVDNKSD 314


>gb|AFH08803.1| chloroplast Fe-superoxide dismutase 2A-a [Prunus persica]
           gi|383386083|gb|AFH08805.1| chloroplast Fe-superoxide
           dismutase 2C-a [Prunus persica]
          Length = 320

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/88 (53%), Positives = 57/88 (64%)
 Frame = -2

Query: 457 PLVWDYSPLLTIDVWEHAYYIDYENRKADYILTFMEKFVSWEMVSLRLEMAKAXXXXXXX 278
           PL+WDYSPLLTIDVWEHAYY+D++NR+ADYI  F+EK VSWE VS RLE+AKA       
Sbjct: 228 PLIWDYSPLLTIDVWEHAYYLDFQNRRADYISIFLEKLVSWEAVSSRLEIAKARAAEREE 287

Query: 277 XXXXXXXXEGDNISDNVDGESMSDNEDE 194
                   E +  SD    E   DN+ +
Sbjct: 288 AEERKKREEEEKTSDGEVEEIYVDNKSD 315


>gb|AEY78522.2| chloroplast Fe superoxide dismutase [Prunus persica]
           gi|383386077|gb|AFH08802.1| chloroplast Fe-superoxide
           dismutase 1A-a [Prunus persica]
           gi|383386081|gb|AFH08804.1| chloroplast Fe-superoxide
           dismutase 2B-a [Prunus persica]
          Length = 319

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/88 (53%), Positives = 57/88 (64%)
 Frame = -2

Query: 457 PLVWDYSPLLTIDVWEHAYYIDYENRKADYILTFMEKFVSWEMVSLRLEMAKAXXXXXXX 278
           PL+WDYSPLLTIDVWEHAYY+D++NR+ADYI  F+EK VSWE VS RLE+AKA       
Sbjct: 227 PLIWDYSPLLTIDVWEHAYYLDFQNRRADYISIFLEKLVSWEAVSSRLEIAKARAAEREE 286

Query: 277 XXXXXXXXEGDNISDNVDGESMSDNEDE 194
                   E +  SD    E   DN+ +
Sbjct: 287 AEERKKREEEEKTSDGEVEEIYVDNKSD 314


>gb|AFG19618.1| iron superoxide dismutase 2, partial [Litchi chinensis]
          Length = 285

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 41/53 (77%), Positives = 48/53 (90%)
 Frame = -2

Query: 457 PLVWDYSPLLTIDVWEHAYYIDYENRKADYILTFMEKFVSWEMVSLRLEMAKA 299
           PL+WDYSPLLTIDVWEHAYY+D++NR+ADYI  F+EK VSWE VS RLE+AKA
Sbjct: 227 PLIWDYSPLLTIDVWEHAYYLDFQNRRADYISIFLEKLVSWEAVSSRLEIAKA 279


Top