BLASTX nr result

ID: Coptis25_contig00021399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021399
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256...   134   1e-29
ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_002514634.1| conserved hypothetical protein [Ricinus comm...   112   3e-23
ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arab...   108   6e-22
gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255 [A...   103   1e-20

>ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256963 [Vitis vinifera]
           gi|297734077|emb|CBI15324.3| unnamed protein product
           [Vitis vinifera]
          Length = 451

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/129 (50%), Positives = 94/129 (72%)
 Frame = +1

Query: 4   SFKLTQKSLVSVLTSCPGVLELGFLKKWENGFSELGVSNVSTMLIQSVLEHSRKLHIEPS 183
           SF++ QK ++S+++ CP +LE  FLKKWE G ++LGVS VS ++I++VLE SR+  ++P 
Sbjct: 93  SFQIPQKFILSLISDCPRLLEFEFLKKWEMGIAKLGVSGVSPLMIRNVLEFSRRFELDPD 152

Query: 184 DVCMCLRGLKGLGFSDETVVKILEGFPRVITMRLRDVEGRIEFLKGLRISWREIDGICYS 363
           DV  C++ LKGLGFSD TV +ILE FPRVI     +++ +I+FL G+ I    IDGI +S
Sbjct: 153 DVSRCVKVLKGLGFSDGTVDRILEEFPRVIMSNESEIQRKIQFLLGIGIPESGIDGIFHS 212

Query: 364 FPLVLGLGV 390
            P +LGLG+
Sbjct: 213 LPGILGLGI 221


>ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|222866206|gb|EEF03337.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/129 (45%), Positives = 84/129 (65%)
 Frame = +1

Query: 4   SFKLTQKSLVSVLTSCPGVLELGFLKKWENGFSELGVSNVSTMLIQSVLEHSRKLHIEPS 183
           SFK+  KS+VS++  CPGVL+  FLK+WE G S+     V  +LI++VLEHS+K  I+P 
Sbjct: 53  SFKIPHKSVVSLIIDCPGVLDFDFLKRWEFGLSKFADLGVPPLLIKTVLEHSKKFQIDPD 112

Query: 184 DVCMCLRGLKGLGFSDETVVKILEGFPRVITMRLRDVEGRIEFLKGLRISWREIDGICYS 363
                L+ LKGLGFS+ T  ++LEGFP VI ++  ++  RI+FL  + I    +D +  S
Sbjct: 113 RFNETLKVLKGLGFSESTTRRVLEGFPGVIALKECEIHRRIQFLMAIGIPRDGVDRVFNS 172

Query: 364 FPLVLGLGV 390
           FP VLG G+
Sbjct: 173 FPEVLGFGI 181


>ref|XP_002514634.1| conserved hypothetical protein [Ricinus communis]
           gi|223546238|gb|EEF47740.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 450

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/130 (44%), Positives = 83/130 (63%)
 Frame = +1

Query: 1   LSFKLTQKSLVSVLTSCPGVLELGFLKKWENGFSELGVSNVSTMLIQSVLEHSRKLHIEP 180
           LSFK+ QK LVS++T CP +L+  FLK W+  FS+    ++S ++I+SVL HS++  I+P
Sbjct: 90  LSFKIPQKVLVSLITECPSILDFEFLKTWKICFSKYRDLSISPLVIKSVLAHSKRFQIDP 149

Query: 181 SDVCMCLRGLKGLGFSDETVVKILEGFPRVITMRLRDVEGRIEFLKGLRISWREIDGICY 360
            +       LKGL FS  T+ ++LE FP VITM+  ++  RIEFL    I   E++ I  
Sbjct: 150 DEFEKNANVLKGLSFSQGTIRRVLEDFPGVITMKRSEIYSRIEFLMRTGIPKDEVESIFS 209

Query: 361 SFPLVLGLGV 390
           SFPL LG G+
Sbjct: 210 SFPLALGFGI 219


>ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp.
           lyrata] gi|297334807|gb|EFH65225.1| hypothetical protein
           ARALYDRAFT_476555 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  108 bits (269), Expect = 6e-22
 Identities = 58/129 (44%), Positives = 78/129 (60%)
 Frame = +1

Query: 1   LSFKLTQKSLVSVLTSCPGVLELGFLKKWENGFSELGVSNVSTMLIQSVLEHSRKLHIEP 180
           LS K+ QKSLVS++  CP VL   FL+KW     + G   VS+  I+SVLEHS ++ I P
Sbjct: 89  LSLKIPQKSLVSLICDCPNVLRSEFLRKWRVPLFDCGKHGVSSSAIKSVLEHSSRIGIGP 148

Query: 181 SDVCMCLRGLKGLGFSDETVVKILEGFPRVITMRLRDVEGRIEFLKGLRISWREIDGICY 360
                C+R LKGLGF D TV +IL  FP V+ +   ++  +IEFL G+ I    I+   +
Sbjct: 149 DKFYECIRVLKGLGFCDSTVSRILSSFPGVLLVNEIEIHRKIEFLVGIDIPRDNIERFFH 208

Query: 361 SFPLVLGLG 387
            FP VLG+G
Sbjct: 209 VFPEVLGIG 217


>gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255 [Arabidopsis thaliana]
          Length = 404

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1   LSFKLTQKSLVSVLTSCPGVLELGFLKKWENGFSELGVSNV-STMLIQSVLEHSRKLHIE 177
           LS K+ QKSLVS+++ CP VL   FL+KW    S  G   V S+  I+SVLEHS ++ I 
Sbjct: 45  LSLKIPQKSLVSLISDCPNVLRSEFLRKWRVPLSNCGKHGVVSSSAIKSVLEHSSRIGIG 104

Query: 178 PSDVCMCLRGLKGLGFSDETVVKILEGFPRVITMRLRDVEGRIEFLKGLRISWREIDGIC 357
           P     C+R LK LGF D TV +IL  FP V+ +   ++  +IEFL G+ I+   I+   
Sbjct: 105 PDKFNECVRVLKSLGFCDSTVSRILSSFPGVLLVNEIEIRRKIEFLVGIGIARDNIERFF 164

Query: 358 YSFPLVLGLG 387
           + FP VLG+G
Sbjct: 165 HVFPEVLGIG 174


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