BLASTX nr result

ID: Coptis25_contig00021351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021351
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273704.1| PREDICTED: vacuolar protein sorting-associat...   173   1e-41
gb|ADB85104.1| vacuolar protein sorting-associated protein VPS28...   171   6e-41
ref|XP_002305661.1| predicted protein [Populus trichocarpa] gi|1...   170   1e-40
ref|XP_002521434.1| Vacuolar protein sorting-associated protein ...   169   2e-40
ref|XP_002316653.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40

>ref|XP_002273704.1| PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2
           isoform 3 [Vitis vinifera]
           gi|225470410|ref|XP_002273673.1| PREDICTED: vacuolar
           protein sorting-associated protein 28 homolog 2 isoform
           2 [Vitis vinifera] gi|225470412|ref|XP_002273612.1|
           PREDICTED: vacuolar protein sorting-associated protein
           28 homolog 2 isoform 1 [Vitis vinifera]
           gi|147776671|emb|CAN74473.1| hypothetical protein
           VITISV_001093 [Vitis vinifera]
           gi|302144239|emb|CBI23477.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  173 bits (439), Expect = 1e-41
 Identities = 86/110 (78%), Positives = 99/110 (90%)
 Frame = -1

Query: 332 PECLKLIAQFKTLTSSLKDIVPSVERFMETYKMDCPSAFNRLVTSGVPATVEHRAAATTV 153
           PEC KLIA FKTL S+LKD +PS+ERF +TYKMDCP+A NRLVTSGVPATVEHR+AA   
Sbjct: 47  PECQKLIAHFKTLASTLKDTIPSIERFADTYKMDCPAAINRLVTSGVPATVEHRSAAAAS 106

Query: 152 GTNSSAAIVAECVQHFITAMDTLKLNMIAVDQVHPVLADLFASLNKLSIL 3
            T +SAA+VAECVQ+FITAMD+LKLNM+AVDQVHP+L+DLFASLNKLSIL
Sbjct: 107 AT-TSAAVVAECVQNFITAMDSLKLNMVAVDQVHPLLSDLFASLNKLSIL 155


>gb|ADB85104.1| vacuolar protein sorting-associated protein VPS28 [Jatropha curcas]
          Length = 209

 Score =  171 bits (433), Expect = 6e-41
 Identities = 88/109 (80%), Positives = 98/109 (89%)
 Frame = -1

Query: 329 ECLKLIAQFKTLTSSLKDIVPSVERFMETYKMDCPSAFNRLVTSGVPATVEHRAAATTVG 150
           EC KLIA FKTL S+LKDIVPS+ERF +TYKMDCP+A NRLVTSGVPATVEHRAAA    
Sbjct: 48  ECHKLIAHFKTLASTLKDIVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAAASA 107

Query: 149 TNSSAAIVAECVQHFITAMDTLKLNMIAVDQVHPVLADLFASLNKLSIL 3
           T +SAAIVAECVQ+FITAMD+LKLNM+AVDQVHP+L+DL ASLNKLSIL
Sbjct: 108 T-TSAAIVAECVQNFITAMDSLKLNMVAVDQVHPLLSDLSASLNKLSIL 155


>ref|XP_002305661.1| predicted protein [Populus trichocarpa] gi|118483725|gb|ABK93756.1|
           unknown [Populus trichocarpa]
           gi|222848625|gb|EEE86172.1| predicted protein [Populus
           trichocarpa]
          Length = 209

 Score =  170 bits (431), Expect = 1e-40
 Identities = 87/109 (79%), Positives = 98/109 (89%)
 Frame = -1

Query: 329 ECLKLIAQFKTLTSSLKDIVPSVERFMETYKMDCPSAFNRLVTSGVPATVEHRAAATTVG 150
           EC KLIA FKTL SSLKD VPS+ERF +TYKMDCP+A NRLVTSGVPATVEHRAAA  V 
Sbjct: 48  ECQKLIAHFKTLASSLKDTVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAA-AVS 106

Query: 149 TNSSAAIVAECVQHFITAMDTLKLNMIAVDQVHPVLADLFASLNKLSIL 3
           + +SA+IVAECVQ+FITAMD+LKLNM+AVDQVHP+L+DL ASLNKLSIL
Sbjct: 107 STTSASIVAECVQNFITAMDSLKLNMVAVDQVHPLLSDLSASLNKLSIL 155


>ref|XP_002521434.1| Vacuolar protein sorting-associated protein VPS28, putative
           [Ricinus communis] gi|223539333|gb|EEF40924.1| Vacuolar
           protein sorting-associated protein VPS28, putative
           [Ricinus communis]
          Length = 209

 Score =  169 bits (429), Expect = 2e-40
 Identities = 87/109 (79%), Positives = 99/109 (90%)
 Frame = -1

Query: 329 ECLKLIAQFKTLTSSLKDIVPSVERFMETYKMDCPSAFNRLVTSGVPATVEHRAAATTVG 150
           EC KLIA FKTL S+LKDIVPS+ERF +TYKMDCP+A NRLVTSGVPATVEHRAAA +  
Sbjct: 48  ECQKLIAHFKTLASTLKDIVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAASSA 107

Query: 149 TNSSAAIVAECVQHFITAMDTLKLNMIAVDQVHPVLADLFASLNKLSIL 3
           T +SAAIVAECVQ+FITAMD+LKLNM+AVDQV+P+L+DL ASLNKLSIL
Sbjct: 108 T-TSAAIVAECVQNFITAMDSLKLNMVAVDQVYPLLSDLSASLNKLSIL 155


>ref|XP_002316653.1| predicted protein [Populus trichocarpa] gi|222859718|gb|EEE97265.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  167 bits (424), Expect = 6e-40
 Identities = 85/109 (77%), Positives = 96/109 (88%)
 Frame = -1

Query: 329 ECLKLIAQFKTLTSSLKDIVPSVERFMETYKMDCPSAFNRLVTSGVPATVEHRAAATTVG 150
           EC KLIA FKTL S+ KD VPS+ERF +TYKMDCP+A NRLVTSGVPATVEHRAAA    
Sbjct: 48  ECQKLIAHFKTLASTFKDTVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAAASS 107

Query: 149 TNSSAAIVAECVQHFITAMDTLKLNMIAVDQVHPVLADLFASLNKLSIL 3
           T +SAA+VAECVQ+FITAMD+LKLNM+AVDQVHP+L+DL ASLNKLSIL
Sbjct: 108 T-TSAAVVAECVQNFITAMDSLKLNMVAVDQVHPLLSDLSASLNKLSIL 155


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