BLASTX nr result

ID: Coptis25_contig00021342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021342
         (1737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276643.1| PREDICTED: tubulin gamma-1 chain [Vitis vini...   922   0.0  
ref|XP_004133834.1| PREDICTED: tubulin gamma-2 chain-like [Cucum...   920   0.0  
gb|AAN87551.1|AF376053_1 gamma-tubulin [Lupinus albus]                917   0.0  
ref|XP_002320847.1| tubulin gamma-1 chain, at3g61650-like protei...   915   0.0  
ref|XP_003626548.1| Tubulin gamma-1 chain protein [Medicago trun...   912   0.0  

>ref|XP_002276643.1| PREDICTED: tubulin gamma-1 chain [Vitis vinifera]
            gi|297745396|emb|CBI40476.3| unnamed protein product
            [Vitis vinifera]
          Length = 474

 Score =  922 bits (2383), Expect = 0.0
 Identities = 455/470 (96%), Positives = 467/470 (99%)
 Frame = -1

Query: 1704 EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYVPR 1525
            EIITLQVGQCGNQIGMEFWKQLCLEHGISK+GILEDFATQGGDRKDVFFYQADDQHY+PR
Sbjct: 4    EIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHYIPR 63

Query: 1524 ALLMDLEPRVINGIQNGEYRNLYNHENVFLSDHGGGAGNNWASGYHQGEQVQEDIMDMID 1345
            ALL+DLEPRVINGIQN EYRNLYNHEN+F+SDHGGGAGNNWASGYHQG+ V+EDIMDMID
Sbjct: 64   ALLIDLEPRVINGIQNSEYRNLYNHENIFVSDHGGGAGNNWASGYHQGKGVEEDIMDMID 123

Query: 1344 READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV 1165
            READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV
Sbjct: 124  READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV 183

Query: 1164 QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL 985
            QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL
Sbjct: 184  QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL 243

Query: 984  RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI 805
            RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI
Sbjct: 244  RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI 303

Query: 804  MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS 625
            MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS
Sbjct: 304  MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS 363

Query: 624  RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE 445
            RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE
Sbjct: 364  RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE 423

Query: 444  FDESREIIESLVDEYKACESPDYIKWGMEDPDSILTGEGSATGALDPKLS 295
            FDESR+IIESLVDEYKACESPDYIKWGMEDPD ILTGEG+A+GA+DPKL+
Sbjct: 424  FDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEGNASGAVDPKLA 473


>ref|XP_004133834.1| PREDICTED: tubulin gamma-2 chain-like [Cucumis sativus]
            gi|449480269|ref|XP_004155846.1| PREDICTED: tubulin
            gamma-2 chain-like [Cucumis sativus]
          Length = 474

 Score =  920 bits (2377), Expect = 0.0
 Identities = 454/470 (96%), Positives = 464/470 (98%)
 Frame = -1

Query: 1704 EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYVPR 1525
            EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY+PR
Sbjct: 4    EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPR 63

Query: 1524 ALLMDLEPRVINGIQNGEYRNLYNHENVFLSDHGGGAGNNWASGYHQGEQVQEDIMDMID 1345
            ALL+DLEPRVINGIQN EYRNLYNHEN+F+SDHGGGAGNNWASGYHQG+ V+EDIMDMID
Sbjct: 64   ALLIDLEPRVINGIQNSEYRNLYNHENIFVSDHGGGAGNNWASGYHQGKGVEEDIMDMID 123

Query: 1344 READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV 1165
            READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV
Sbjct: 124  READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV 183

Query: 1164 QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL 985
            QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL
Sbjct: 184  QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL 243

Query: 984  RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI 805
            RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI
Sbjct: 244  RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI 303

Query: 804  MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS 625
            MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS
Sbjct: 304  MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS 363

Query: 624  RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE 445
            RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE
Sbjct: 364  RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE 423

Query: 444  FDESREIIESLVDEYKACESPDYIKWGMEDPDSILTGEGSATGALDPKLS 295
            FDESR+IIESLVDEYKACESPDYIKWGMEDPD ILTGEG+A+G  DP L+
Sbjct: 424  FDESRDIIESLVDEYKACESPDYIKWGMEDPDQILTGEGNASGTADPSLA 473


>gb|AAN87551.1|AF376053_1 gamma-tubulin [Lupinus albus]
          Length = 472

 Score =  917 bits (2369), Expect = 0.0
 Identities = 450/468 (96%), Positives = 466/468 (99%)
 Frame = -1

Query: 1704 EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYVPR 1525
            EIITLQVGQCGNQIGMEFWKQLCLEHGISK+GILEDFATQGGDRKDVFFYQADDQHY+PR
Sbjct: 4    EIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHYIPR 63

Query: 1524 ALLMDLEPRVINGIQNGEYRNLYNHENVFLSDHGGGAGNNWASGYHQGEQVQEDIMDMID 1345
            ALL+DLEPRVINGIQNGEYRNLYNHENVFLSDHGGGAGNNWASGYHQG+ V+EDIMDMID
Sbjct: 64   ALLIDLEPRVINGIQNGEYRNLYNHENVFLSDHGGGAGNNWASGYHQGKNVEEDIMDMID 123

Query: 1344 READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV 1165
            READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV
Sbjct: 124  READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV 183

Query: 1164 QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL 985
            QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL
Sbjct: 184  QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL 243

Query: 984  RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI 805
            RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQAN+IRKTTVLDVMRRLLQTKN+
Sbjct: 244  RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANLIRKTTVLDVMRRLLQTKNV 303

Query: 804  MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS 625
            MVSSYARTK+ASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS
Sbjct: 304  MVSSYARTKDASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS 363

Query: 624  RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE 445
            RKSPYVQTAHRVSGLMLASHTSIRHLFS+CLSQYEKLRKKQAFLDNYRKFPMFADNDLSE
Sbjct: 364  RKSPYVQTAHRVSGLMLASHTSIRHLFSRCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE 423

Query: 444  FDESREIIESLVDEYKACESPDYIKWGMEDPDSILTGEGSATGALDPK 301
            FDESR+IIESLVDEYKACESPDYIKWGMEDP++++TGEGS +G+LDPK
Sbjct: 424  FDESRDIIESLVDEYKACESPDYIKWGMEDPNNMMTGEGSDSGSLDPK 471


>ref|XP_002320847.1| tubulin gamma-1 chain, at3g61650-like protein [Populus trichocarpa]
            gi|222861620|gb|EEE99162.1| tubulin gamma-1 chain,
            at3g61650-like protein [Populus trichocarpa]
          Length = 474

 Score =  915 bits (2364), Expect = 0.0
 Identities = 451/470 (95%), Positives = 464/470 (98%)
 Frame = -1

Query: 1704 EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYVPR 1525
            EIITLQVGQCGNQIGMEFWKQLCLEHGI+KDGILEDFATQGGDRKDVFFYQADDQHY+PR
Sbjct: 4    EIITLQVGQCGNQIGMEFWKQLCLEHGINKDGILEDFATQGGDRKDVFFYQADDQHYIPR 63

Query: 1524 ALLMDLEPRVINGIQNGEYRNLYNHENVFLSDHGGGAGNNWASGYHQGEQVQEDIMDMID 1345
            ALL+DLEPRVINGIQN EYRNLYNHEN+F+SDHGGGAGNNWASGYHQG+ V+EDIMDMID
Sbjct: 64   ALLIDLEPRVINGIQNSEYRNLYNHENIFVSDHGGGAGNNWASGYHQGKGVEEDIMDMID 123

Query: 1344 READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV 1165
            READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV
Sbjct: 124  READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV 183

Query: 1164 QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL 985
            QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLS PTFAQTNSLVSTVMSASTTTL
Sbjct: 184  QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSTPTFAQTNSLVSTVMSASTTTL 243

Query: 984  RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI 805
            RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI
Sbjct: 244  RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI 303

Query: 804  MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS 625
            MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS
Sbjct: 304  MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS 363

Query: 624  RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE 445
            RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE
Sbjct: 364  RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE 423

Query: 444  FDESREIIESLVDEYKACESPDYIKWGMEDPDSILTGEGSATGALDPKLS 295
            FDESR+IIESLVDEYKACESPDYIKWGMEDPD++LT EG+A G +DPKL+
Sbjct: 424  FDESRDIIESLVDEYKACESPDYIKWGMEDPDNLLTEEGNAKGTVDPKLA 473


>ref|XP_003626548.1| Tubulin gamma-1 chain protein [Medicago truncatula]
            gi|355501563|gb|AES82766.1| Tubulin gamma-1 chain protein
            [Medicago truncatula]
          Length = 474

 Score =  912 bits (2358), Expect = 0.0
 Identities = 447/468 (95%), Positives = 464/468 (99%)
 Frame = -1

Query: 1704 EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYVPR 1525
            EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY+PR
Sbjct: 4    EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPR 63

Query: 1524 ALLMDLEPRVINGIQNGEYRNLYNHENVFLSDHGGGAGNNWASGYHQGEQVQEDIMDMID 1345
            ALL+DLEPRVINGIQN +YRNLYNHEN+F++DHGGGAGNNWASGYHQG+ V+EDIMDMID
Sbjct: 64   ALLIDLEPRVINGIQNSDYRNLYNHENIFVADHGGGAGNNWASGYHQGKNVEEDIMDMID 123

Query: 1344 READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV 1165
            READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV
Sbjct: 124  READGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVV 183

Query: 1164 QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL 985
            QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL
Sbjct: 184  QPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTL 243

Query: 984  RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNI 805
            RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQ KNI
Sbjct: 244  RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQAKNI 303

Query: 804  MVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS 625
            MVSSYARTK+ASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS
Sbjct: 304  MVSSYARTKDASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALS 363

Query: 624  RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSE 445
            RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQY+KLR+KQAFLDNYRKFPMFADNDLSE
Sbjct: 364  RKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYDKLRRKQAFLDNYRKFPMFADNDLSE 423

Query: 444  FDESREIIESLVDEYKACESPDYIKWGMEDPDSILTGEGSATGALDPK 301
            FDESR+IIESLVDEYKACESPDYIKWGMEDP++++TGEGSA G+LDPK
Sbjct: 424  FDESRDIIESLVDEYKACESPDYIKWGMEDPNNMMTGEGSAAGSLDPK 471


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