BLASTX nr result

ID: Coptis25_contig00021338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021338
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265738.1| PREDICTED: uncharacterized protein LOC100266...   140   1e-31
ref|XP_003541926.1| PREDICTED: uncharacterized protein LOC100816...   135   3e-30
ref|XP_002864830.1| EMB1692 [Arabidopsis lyrata subsp. lyrata] g...   127   1e-27
ref|XP_004152293.1| PREDICTED: uncharacterized protein LOC101217...   125   4e-27
ref|XP_002302898.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27

>ref|XP_002265738.1| PREDICTED: uncharacterized protein LOC100266927 [Vitis vinifera]
           gi|296089617|emb|CBI39436.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score =  140 bits (353), Expect = 1e-31
 Identities = 83/168 (49%), Positives = 106/168 (63%), Gaps = 5/168 (2%)
 Frame = +3

Query: 33  SLPSLPKPNNISTSLHSNFLPINPPSL--TQKPNXXXXXXXXXXXXXXXXXXXXXXXCPP 206
           SLP   + +  +  L+SNFLP+NP  +  T   N                        P 
Sbjct: 4   SLPVSSQKDKHTIFLNSNFLPLNPQWIPYTINRNDSKNRKPKNLSISVSCSSLKIVRSPS 63

Query: 207 LDRHVVKQNKIRFVQKLKTLLLSKPKHYIPLPILSKCRSYLSLHKPRSLLSMIHRYPTIF 386
           LD+++VKQNK+RF+QKLKTLLLSKPKHY+P+ ILSKCRSYLSL KPRSLLSMI+RYP+IF
Sbjct: 64  LDKNIVKQNKLRFIQKLKTLLLSKPKHYMPIHILSKCRSYLSLSKPRSLLSMIYRYPSIF 123

Query: 387 QLLKIPS-SLPSSTYKD--QLFISLTPQASLLFAQELSLKHTISNALA 521
           +L +IP+   P +  K   QL + LTP A+ L AQE +LK  +S  LA
Sbjct: 124 ELFRIPTPPTPFNATKSCTQLCVRLTPAAASLAAQECNLKSAMSITLA 171


>ref|XP_003541926.1| PREDICTED: uncharacterized protein LOC100816820 [Glycine max]
          Length = 498

 Score =  135 bits (341), Expect = 3e-30
 Identities = 71/108 (65%), Positives = 85/108 (78%), Gaps = 3/108 (2%)
 Frame = +3

Query: 207 LDRHVVKQNKIRFVQKLKTLLLSKPKHYIPLPILSKCRSYLSLHKPRSLLSMIHRYPTIF 386
           LDRHVV +NK RFVQKLKTLLLSKPKHYIPL ILSKCR+YL L KPRS+LSMIHRYP+IF
Sbjct: 64  LDRHVVTKNKTRFVQKLKTLLLSKPKHYIPLHILSKCRTYLCLSKPRSILSMIHRYPSIF 123

Query: 387 QLLKI---PSSLPSSTYKDQLFISLTPQASLLFAQELSLKHTISNALA 521
           +L  +   P+ L ++    QL + LTP A+ L A+ELSL+ +ISN LA
Sbjct: 124 ELFNVPWPPTPLNATKLHPQLCVRLTPAAAALAAEELSLQSSISNMLA 171


>ref|XP_002864830.1| EMB1692 [Arabidopsis lyrata subsp. lyrata]
           gi|297310665|gb|EFH41089.1| EMB1692 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 492

 Score =  127 bits (319), Expect = 1e-27
 Identities = 68/110 (61%), Positives = 82/110 (74%), Gaps = 3/110 (2%)
 Frame = +3

Query: 201 PPLDRHVVKQNKIRFVQKLKTLLLSKPKHYIPLPILSKCRSYLSLHKPRSLLSMIHRYPT 380
           P LDRHVVKQN++RFVQKLKT+LLSKPKH+IP+ IL KCRSYL +  PR++LSMI RYPT
Sbjct: 61  PSLDRHVVKQNRVRFVQKLKTILLSKPKHFIPIQILYKCRSYLCIENPRAILSMIRRYPT 120

Query: 381 IFQLLKIPS-SLPSSTYK--DQLFISLTPQASLLFAQELSLKHTISNALA 521
           IF+L   P+  LP +  K   QL + LT  AS L  QEL+LK  IS+ LA
Sbjct: 121 IFELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDQLA 170


>ref|XP_004152293.1| PREDICTED: uncharacterized protein LOC101217073 [Cucumis sativus]
          Length = 484

 Score =  125 bits (314), Expect = 4e-27
 Identities = 68/108 (62%), Positives = 78/108 (72%), Gaps = 3/108 (2%)
 Frame = +3

Query: 207 LDRHVVKQNKIRFVQKLKTLLLSKPKHYIPLPILSKCRSYLSLHKPRSLLSMIHRYPTIF 386
           LDRH VK NK RFVQKL  LLLSKPKHYIPL ILSKCR YLSL +PRSLLSMIHRYP+IF
Sbjct: 64  LDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYPSIF 123

Query: 387 QLLKI---PSSLPSSTYKDQLFISLTPQASLLFAQELSLKHTISNALA 521
           +L  I   P+ L ++    QL + LTP A+ +  Q+  LK  ISN LA
Sbjct: 124 ELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLA 171


>ref|XP_002302898.1| predicted protein [Populus trichocarpa] gi|222844624|gb|EEE82171.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  125 bits (314), Expect = 4e-27
 Identities = 69/108 (63%), Positives = 84/108 (77%), Gaps = 3/108 (2%)
 Frame = +3

Query: 207 LDRHVVKQNKIRFVQKLKTLLLSKPKHYIPLPILSKCRSYLSLHKPRSLLSMIHRYPTIF 386
           LD+HVV+Q++IRFVQKLKTLLLSKPKHYIPL ILSKCRSYLSL KP S+ SMI+RYP+IF
Sbjct: 59  LDKHVVRQSRIRFVQKLKTLLLSKPKHYIPLHILSKCRSYLSLTKPCSIRSMIYRYPSIF 118

Query: 387 QLLKIPS-SLPSSTYKD--QLFISLTPQASLLFAQELSLKHTISNALA 521
           ++  +P+  LP +  K   QL + LTP A+ L AQEL L+  IS  LA
Sbjct: 119 EIFPMPTPPLPLNATKPYYQLCVRLTPAAAALAAQELRLQSEISTDLA 166


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