BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021336
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   151   3e-70
ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like...   132   5e-60
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...   130   2e-57
gb|AAL86477.1|AC077693_16 putative GTPase domain containing prot...   131   3e-57
ref|NP_001065460.2| Os10g0572000 [Oryza sativa Japonica Group] g...   131   3e-57

>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
           gi|297744953|emb|CBI38545.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  151 bits (382), Expect(2) = 3e-70
 Identities = 74/94 (78%), Positives = 84/94 (89%)
 Frame = -2

Query: 854 KFDKSKFTITVMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHATVSPLPGETKDITSL 675
           K D S +T T+MLVGIPNVGKSALANSLHQIGRISAAEKGKLKHATVSP+PGET+DI+SL
Sbjct: 125 KIDHSSYTATIMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHATVSPIPGETRDISSL 184

Query: 674 KIASCPNIYVLDTPGVLHPDSIDIEMGSKLALTG 573
           KI S PN+YVLDTPG+L PD +D+ + SKLALTG
Sbjct: 185 KIGSHPNVYVLDTPGILPPDILDVVVCSKLALTG 218



 Score =  140 bits (354), Expect(2) = 3e-70
 Identities = 73/136 (53%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
 Frame = -3

Query: 499 LAQYLLAILNLSGEHKRWESLISKEDDCLSIEHNAK-LSDSVGSNMKKKIFCTDHTQDFV 323
           LAQY L+ILN S E+K+WE L ++E++  +I+     L  S   + +K+ + TDHTQDFV
Sbjct: 230 LAQYFLSILNRSDEYKKWEKLSAEENEISTIDQRVGCLGSSELDSRQKRQYPTDHTQDFV 289

Query: 322 VQDVRRTLFKTISSFEGNVEEANYLASLIDSQLVALRDAFRVCSESDDDILHSVPTKLLN 143
           V++VRR LF+TISSF G++E+   L+ LI++Q  ALR+AFRV SES +D+ + V  KLLN
Sbjct: 290 VREVRRVLFETISSFPGSLEKEKDLSRLIETQFTALREAFRVASESGEDVENKVAAKLLN 349

Query: 142 LYRIGRLGHYILDIVP 95
           LYR GRLGHY LD VP
Sbjct: 350 LYRTGRLGHYTLDSVP 365


>ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like [Glycine max]
          Length = 399

 Score =  132 bits (333), Expect(2) = 5e-60
 Identities = 71/102 (69%), Positives = 80/102 (78%), Gaps = 3/102 (2%)
 Frame = -2

Query: 869 RVRELKFDK---SKFTITVMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHATVSPLPG 699
           RV ELK      + +T TVMLVGIPNVGKSAL N+LHQ+GRISAAEKGKLKHATVSP PG
Sbjct: 146 RVSELKGADQCDNNYTATVMLVGIPNVGKSALVNALHQVGRISAAEKGKLKHATVSPEPG 205

Query: 698 ETKDITSLKIASCPNIYVLDTPGVLHPDSIDIEMGSKLALTG 573
           ETKDI S KI S PNIYVLDTP +L P   ++++ SKL LTG
Sbjct: 206 ETKDIRSFKIGSHPNIYVLDTPAILSPKVPNVDILSKLILTG 247



 Score =  125 bits (314), Expect(2) = 5e-60
 Identities = 72/138 (52%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
 Frame = -3

Query: 499 LAQYLLAILNLSGEHKRWESLISKEDDCLSIEHNAKLSDSVGSNMK-KKIFCTDHTQDFV 323
           +AQ+ LAI N S ++K+W  L  K++D L +    +   S G +MK K    TDHTQD V
Sbjct: 259 VAQHFLAIHNSSEQYKKWAKLSMKDNDRLFLNGTTEQLTSSGLHMKHKNQIPTDHTQDCV 318

Query: 322 VQDVRRTLFKTISSFEGNVEEANYLASLIDSQLVALRDAFRVCSESDDDILH-SVPTKLL 146
           VQDVRRTLF+TISSFEG+V   + + +LI  Q  AL++AF V  ES++D  H  V  KLL
Sbjct: 319 VQDVRRTLFETISSFEGDVRCEDEMEALIARQFTALQEAFHVSIESEEDDAHDKVAGKLL 378

Query: 145 NLYRIGRLGHYILDIVPG 92
           NL+R GRLGHYILD +PG
Sbjct: 379 NLFRTGRLGHYILDNLPG 396


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
           gi|223534309|gb|EEF36021.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 373

 Score =  130 bits (327), Expect(2) = 2e-57
 Identities = 75/107 (70%), Positives = 81/107 (75%), Gaps = 8/107 (7%)
 Frame = -2

Query: 869 RVRELK-FDKSKFTITVMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHATVSPLPGET 693
           +VR LK  D S  TIT+M+VGIPNVGKSALA SLH IGRISAAEKGKLKHA V+P PGET
Sbjct: 119 QVRGLKNIDHSGCTITMMMVGIPNVGKSALAKSLHHIGRISAAEKGKLKHAKVTPHPGET 178

Query: 692 KDITSLK-------IASCPNIYVLDTPGVLHPDSIDIEMGSKLALTG 573
           KDI+SLK       I S PNIYVLDTPGVL P   D E+  KLALTG
Sbjct: 179 KDISSLKACSLSLIIGSHPNIYVLDTPGVLPPQIFDAEVCFKLALTG 225



 Score =  119 bits (297), Expect(2) = 2e-57
 Identities = 65/133 (48%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
 Frame = -3

Query: 499 LAQYLLAILNLSGEHKRWESLISKEDDCLSIEHNAK-LSDSVGSNMKKKIFCTDHTQDFV 323
           LAQY LAILNLS E+K+W  L ++E +    ++ A+ L D       KK   TDHTQDF+
Sbjct: 237 LAQYFLAILNLSDEYKKWAKLSAREKEKSFTDNKAECLRDKQLDTEGKKEHLTDHTQDFI 296

Query: 322 VQDVRRTLFKTISSFEGNVEEANYLASLIDSQLVALRDAFRVCSESDDDILHSVPTKLLN 143
           V   RR LF+T+SSF+G+V+    L  LI+ Q+ AL + F +  + +DD    V TKLLN
Sbjct: 297 VHCARRKLFETVSSFDGDVQNEVDLQKLIELQVAALTETFHLPLDLEDDACSKVATKLLN 356

Query: 142 LYRIGRLGHYILD 104
           LYR GRLGHY LD
Sbjct: 357 LYRTGRLGHYTLD 369


>gb|AAL86477.1|AC077693_16 putative GTPase domain containing protein [Oryza sativa Japonica
           Group] gi|31433619|gb|AAP55111.1| expressed protein
           [Oryza sativa Japonica Group]
           gi|125533031|gb|EAY79596.1| hypothetical protein
           OsI_34736 [Oryza sativa Indica Group]
           gi|125575767|gb|EAZ17051.1| hypothetical protein
           OsJ_32544 [Oryza sativa Japonica Group]
          Length = 370

 Score =  131 bits (329), Expect(2) = 3e-57
 Identities = 67/100 (67%), Positives = 79/100 (79%)
 Frame = -2

Query: 872 ARVRELKFDKSKFTITVMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHATVSPLPGET 693
           A++RE+K  +S  T TV+LVGIPNVGKSA+ N++H+IGRI AAEKGKLKHA VS  PGET
Sbjct: 122 AKIREIKLGESDCTGTVLLVGIPNVGKSAIVNAMHRIGRIGAAEKGKLKHAIVSSHPGET 181

Query: 692 KDITSLKIASCPNIYVLDTPGVLHPDSIDIEMGSKLALTG 573
           KDI+  K+AS PNIYVLDTPGVL P   + E G  LALTG
Sbjct: 182 KDISGYKVASHPNIYVLDTPGVLSPVFFNDESGPLLALTG 221



 Score =  117 bits (294), Expect(2) = 3e-57
 Identities = 64/135 (47%), Positives = 90/135 (66%)
 Frame = -3

Query: 499 LAQYLLAILNLSGEHKRWESLISKEDDCLSIEHNAKLSDSVGSNMKKKIFCTDHTQDFVV 320
           +AQ+LLAILN    +K+WE++ ++  D  S  H    + S  S+  K+ + +DHTQDFVV
Sbjct: 233 IAQFLLAILNSRETYKKWENM-NQAGDMPSFSH----AMSSSSHHNKRQYASDHTQDFVV 287

Query: 319 QDVRRTLFKTISSFEGNVEEANYLASLIDSQLVALRDAFRVCSESDDDILHSVPTKLLNL 140
           + VR+ LF +ISSF+G +E  N L SLI+ Q +AL++AFRV ++  +D+   V  KLLNL
Sbjct: 288 KAVRQVLFDSISSFKGYLENENELKSLIECQFIALQEAFRVSADLSEDVRKLVAMKLLNL 347

Query: 139 YRIGRLGHYILDIVP 95
           YR GRLG Y LD  P
Sbjct: 348 YRTGRLGRYTLDCAP 362


>ref|NP_001065460.2| Os10g0572000 [Oryza sativa Japonica Group]
           gi|255679658|dbj|BAF27297.2| Os10g0572000 [Oryza sativa
           Japonica Group]
          Length = 348

 Score =  131 bits (329), Expect(2) = 3e-57
 Identities = 67/100 (67%), Positives = 79/100 (79%)
 Frame = -2

Query: 872 ARVRELKFDKSKFTITVMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHATVSPLPGET 693
           A++RE+K  +S  T TV+LVGIPNVGKSA+ N++H+IGRI AAEKGKLKHA VS  PGET
Sbjct: 95  AKIREIKLGESDCTGTVLLVGIPNVGKSAIVNAMHRIGRIGAAEKGKLKHAIVSSHPGET 154

Query: 692 KDITSLKIASCPNIYVLDTPGVLHPDSIDIEMGSKLALTG 573
           KDI+  K+AS PNIYVLDTPGVL P   + E G  LALTG
Sbjct: 155 KDISGYKVASHPNIYVLDTPGVLSPVFFNDESGPLLALTG 194



 Score =  117 bits (294), Expect(2) = 3e-57
 Identities = 64/135 (47%), Positives = 90/135 (66%)
 Frame = -3

Query: 499 LAQYLLAILNLSGEHKRWESLISKEDDCLSIEHNAKLSDSVGSNMKKKIFCTDHTQDFVV 320
           +AQ+LLAILN    +K+WE++ ++  D  S  H    + S  S+  K+ + +DHTQDFVV
Sbjct: 211 IAQFLLAILNSRETYKKWENM-NQAGDMPSFSH----AMSSSSHHNKRQYASDHTQDFVV 265

Query: 319 QDVRRTLFKTISSFEGNVEEANYLASLIDSQLVALRDAFRVCSESDDDILHSVPTKLLNL 140
           + VR+ LF +ISSF+G +E  N L SLI+ Q +AL++AFRV ++  +D+   V  KLLNL
Sbjct: 266 KAVRQVLFDSISSFKGYLENENELKSLIECQFIALQEAFRVSADLSEDVRKLVAMKLLNL 325

Query: 139 YRIGRLGHYILDIVP 95
           YR GRLG Y LD  P
Sbjct: 326 YRTGRLGRYTLDCAP 340