BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021332
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containi...   268   3e-70
ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi...   267   1e-69
ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|2...   254   9e-66
gb|AAO41891.1| putative selenium-binding protein [Arabidopsis th...   253   2e-65
ref|NP_178481.1| pentatricopeptide repeat-containing protein [Ar...   253   2e-65

>ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
           gi|449475689|ref|XP_004154524.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  268 bits (686), Expect = 3e-70
 Identities = 124/185 (67%), Positives = 150/185 (81%)
 Frame = +1

Query: 7   NLRTYID*AFA*RYAGLVDDGWCHFQSMKRLYGIDPGREHYGCIVDLLGRAGKLDEAIQF 186
           N  T +   FA  +AGLV+DGW +FQSMK  +GIDPGREHYGCI+DLLGRAGKLDEA++ 
Sbjct: 314 NYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKL 373

Query: 187 IQEMEGEPDAVIWRTLLGACRVHKNADLLTYVAKQILEIEPHDEGTYVLLSNIYANSQRW 366
           I EM  EPDAV WR LLGACRVHKN DL  Y AK+IL+++P D GTY+LLSNIYANSQ+W
Sbjct: 374 IHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKW 433

Query: 367 EDVAGVRKNMSERGIKKEPGCSWIEHNKQVHAFVLGDESHPQIKTIYREMNHLIKRITEV 546
           EDVA VR+ M  RG+KK+PGCSWIE +KQVHAF+LGD SHP+I+ I RE++ LI+R+  +
Sbjct: 434 EDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRL 493

Query: 547 GYTPD 561
           GY PD
Sbjct: 494 GYVPD 498


>ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  267 bits (682), Expect = 1e-69
 Identities = 120/185 (64%), Positives = 151/185 (81%)
 Frame = +1

Query: 7   NLRTYID*AFA*RYAGLVDDGWCHFQSMKRLYGIDPGREHYGCIVDLLGRAGKLDEAIQF 186
           N  T +   FA  +AGLV+ GW +F+SMK+L+G+DPGREHYGC++DLLGRAG+LDEA++ 
Sbjct: 351 NYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKL 410

Query: 187 IQEMEGEPDAVIWRTLLGACRVHKNADLLTYVAKQILEIEPHDEGTYVLLSNIYANSQRW 366
           I EME EPD+V WRTLLGACRVH+N DL  Y AK+I+E+EP D GTY+LLSNIYAN+QRW
Sbjct: 411 IHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRW 470

Query: 367 EDVAGVRKNMSERGIKKEPGCSWIEHNKQVHAFVLGDESHPQIKTIYREMNHLIKRITEV 546
           EDVA VRK M+ RGI+K PGCSWIE +KQ+H F+LGD SHP+I+ I + +N LI+R+  V
Sbjct: 471 EDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGV 530

Query: 547 GYTPD 561
           GY PD
Sbjct: 531 GYVPD 535


>ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|222837655|gb|EEE76020.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  254 bits (648), Expect = 9e-66
 Identities = 118/185 (63%), Positives = 144/185 (77%)
 Frame = +1

Query: 7   NLRTYID*AFA*RYAGLVDDGWCHFQSMKRLYGIDPGREHYGCIVDLLGRAGKLDEAIQF 186
           N  T +   FA  +AGLV++G  +F SMK L+GIDPGREHYGC++DLLGRAG+L EA+  
Sbjct: 262 NYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDL 321

Query: 187 IQEMEGEPDAVIWRTLLGACRVHKNADLLTYVAKQILEIEPHDEGTYVLLSNIYANSQRW 366
           I EME EPDAV WR LL ACRVH+N D+  + AKQIL ++P D GTYVLLSNIYAN+QRW
Sbjct: 322 INEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRW 381

Query: 367 EDVAGVRKNMSERGIKKEPGCSWIEHNKQVHAFVLGDESHPQIKTIYREMNHLIKRITEV 546
            DVA VR+ M+ RGIKKEPGCSWIE +KQ+HAF+LGD SHPQI+ I  ++N LI ++  V
Sbjct: 382 NDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGV 441

Query: 547 GYTPD 561
           GY PD
Sbjct: 442 GYVPD 446


>gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  253 bits (645), Expect = 2e-65
 Identities = 112/185 (60%), Positives = 146/185 (78%)
 Frame = +1

Query: 7   NLRTYID*AFA*RYAGLVDDGWCHFQSMKRLYGIDPGREHYGCIVDLLGRAGKLDEAIQF 186
           N  T +   FA  +AGL++DGW +F+SMK+LYGIDP REHYGC++DLLG+AGKLD+A++ 
Sbjct: 358 NYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKL 417

Query: 187 IQEMEGEPDAVIWRTLLGACRVHKNADLLTYVAKQILEIEPHDEGTYVLLSNIYANSQRW 366
           + EME EPDAV WRTLLGACRV +N  L  Y AK+++ ++P D GTY LLSNIYANSQ+W
Sbjct: 418 LNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKW 477

Query: 367 EDVAGVRKNMSERGIKKEPGCSWIEHNKQVHAFVLGDESHPQIKTIYREMNHLIKRITEV 546
           + V  +R  M +RGIKKEPGCSWIE NKQ+HAF++GD SHPQI  + +++N LI R+T +
Sbjct: 478 DSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGI 537

Query: 547 GYTPD 561
           GY P+
Sbjct: 538 GYVPE 542


>ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
           gi|4582435|gb|AAD24821.1| putative selenium-binding
           protein [Arabidopsis thaliana]
           gi|330250668|gb|AEC05762.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  253 bits (645), Expect = 2e-65
 Identities = 112/185 (60%), Positives = 146/185 (78%)
 Frame = +1

Query: 7   NLRTYID*AFA*RYAGLVDDGWCHFQSMKRLYGIDPGREHYGCIVDLLGRAGKLDEAIQF 186
           N  T +   FA  +AGL++DGW +F+SMK+LYGIDP REHYGC++DLLG+AGKLD+A++ 
Sbjct: 358 NYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKL 417

Query: 187 IQEMEGEPDAVIWRTLLGACRVHKNADLLTYVAKQILEIEPHDEGTYVLLSNIYANSQRW 366
           + EME EPDAV WRTLLGACRV +N  L  Y AK+++ ++P D GTY LLSNIYANSQ+W
Sbjct: 418 LNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKW 477

Query: 367 EDVAGVRKNMSERGIKKEPGCSWIEHNKQVHAFVLGDESHPQIKTIYREMNHLIKRITEV 546
           + V  +R  M +RGIKKEPGCSWIE NKQ+HAF++GD SHPQI  + +++N LI R+T +
Sbjct: 478 DSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGI 537

Query: 547 GYTPD 561
           GY P+
Sbjct: 538 GYVPE 542