BLASTX nr result

ID: Coptis25_contig00021330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021330
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319871.1| predicted protein [Populus trichocarpa] gi|2...   284   3e-74
ref|XP_002280352.1| PREDICTED: macro domain-containing protein V...   279   7e-73
emb|CBI25361.3| unnamed protein product [Vitis vinifera]              278   2e-72
ref|XP_002520862.1| Protein LRP16, putative [Ricinus communis] g...   276   5e-72
ref|XP_002881729.1| hypothetical protein ARALYDRAFT_483117 [Arab...   276   8e-72

>ref|XP_002319871.1| predicted protein [Populus trichocarpa] gi|222858247|gb|EEE95794.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  284 bits (726), Expect = 3e-74
 Identities = 135/177 (76%), Positives = 150/177 (84%)
 Frame = -1

Query: 821 SSSLLKLQMGDITKWSIDGLSDAIVNAANERMLGGGGVDGAIHRAAGPELREACYKVPEV 642
           S  LLK+  GDITKWS+DG SDAIVN ANERMLGGGG DGAIHRAAGP+LR+ACY VPEV
Sbjct: 2   SPCLLKISKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPQLRDACYTVPEV 61

Query: 641 RRGVRCPTGEARVTPAFQLPVSRVIHTVGPIYDDHEKPEVLLESAYRNSLTLAKENSIQY 462
           R GVRCPTGEAR+TP F LP  RVIHTVGPIYD    PE  L +AYRNSL LAK+N+I+Y
Sbjct: 62  RPGVRCPTGEARITPGFNLPAFRVIHTVGPIYDVDGNPEASLRNAYRNSLILAKDNNIKY 121

Query: 461 IAFPAISCGVYGYPYEEAATISISVIKEFAGDFKEVHFVLFSDDIYNIWLERASMLL 291
           IAFPAISCGVYGYPYEEAA ++IS +KEFA D KEVHFVLFSD+IYN+WLE+A  LL
Sbjct: 122 IAFPAISCGVYGYPYEEAAKVAISTVKEFADDLKEVHFVLFSDEIYNVWLEKAKELL 178


>ref|XP_002280352.1| PREDICTED: macro domain-containing protein VPA0103 [Vitis vinifera]
           gi|147769460|emb|CAN70345.1| hypothetical protein
           VITISV_012577 [Vitis vinifera]
          Length = 231

 Score =  279 bits (714), Expect = 7e-73
 Identities = 142/226 (62%), Positives = 164/226 (72%)
 Frame = -1

Query: 968 LHKTRYRKNPNFSILKKQISSVIIMAQXXXXXXXXXXXXKYGVGHFSLGSSSLLKLQMGD 789
           L K R   NP    L K  SS  I++Q                   +L  +S LK+Q GD
Sbjct: 15  LPKPRNLDNPISKTLPKYSSSWKIVSQMADLPT-----------QLALSPTSSLKIQKGD 63

Query: 788 ITKWSIDGLSDAIVNAANERMLGGGGVDGAIHRAAGPELREACYKVPEVRRGVRCPTGEA 609
           ITKW +DG SDAIVN ANERMLGGGG DGAIHRAAGPEL  ACYKVPEVR G+RCPTGEA
Sbjct: 64  ITKWFVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELVAACYKVPEVRPGIRCPTGEA 123

Query: 608 RVTPAFQLPVSRVIHTVGPIYDDHEKPEVLLESAYRNSLTLAKENSIQYIAFPAISCGVY 429
           R+T  F+LP + VIHTVGPIYD    PE  L+SAY N L+LAKEN++QYIAFPAISCGV+
Sbjct: 124 RITQGFKLPAAHVIHTVGPIYDVDSNPEASLKSAYANCLSLAKENNVQYIAFPAISCGVF 183

Query: 428 GYPYEEAATISISVIKEFAGDFKEVHFVLFSDDIYNIWLERASMLL 291
           GYPY+EAAT++IS +KEF  D KEVHFVLFSDDIYN+WL +A+ LL
Sbjct: 184 GYPYDEAATVAISTVKEFGKDLKEVHFVLFSDDIYNVWLNKANELL 229


>emb|CBI25361.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score =  278 bits (711), Expect = 2e-72
 Identities = 131/180 (72%), Positives = 151/180 (83%)
 Frame = -1

Query: 830 SLGSSSLLKLQMGDITKWSIDGLSDAIVNAANERMLGGGGVDGAIHRAAGPELREACYKV 651
           +L  +S LK+Q GDITKW +DG SDAIVN ANERMLGGGG DGAIHRAAGPEL  ACYKV
Sbjct: 9   ALSPTSSLKIQKGDITKWFVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELVAACYKV 68

Query: 650 PEVRRGVRCPTGEARVTPAFQLPVSRVIHTVGPIYDDHEKPEVLLESAYRNSLTLAKENS 471
           PEVR G+RCPTGEAR+T  F+LP + VIHTVGPIYD    PE  L+SAY N L+LAKEN+
Sbjct: 69  PEVRPGIRCPTGEARITQGFKLPAAHVIHTVGPIYDVDSNPEASLKSAYANCLSLAKENN 128

Query: 470 IQYIAFPAISCGVYGYPYEEAATISISVIKEFAGDFKEVHFVLFSDDIYNIWLERASMLL 291
           +QYIAFPAISCGV+GYPY+EAAT++IS +KEF  D KEVHFVLFSDDIYN+WL +A+ LL
Sbjct: 129 VQYIAFPAISCGVFGYPYDEAATVAISTVKEFGKDLKEVHFVLFSDDIYNVWLNKANELL 188


>ref|XP_002520862.1| Protein LRP16, putative [Ricinus communis]
           gi|223539993|gb|EEF41571.1| Protein LRP16, putative
           [Ricinus communis]
          Length = 269

 Score =  276 bits (707), Expect = 5e-72
 Identities = 129/181 (71%), Positives = 156/181 (86%)
 Frame = -1

Query: 833 FSLGSSSLLKLQMGDITKWSIDGLSDAIVNAANERMLGGGGVDGAIHRAAGPELREACYK 654
           F L SSS+LK+  GDITKW +DG SDAIVN ANE+MLGGGG DGAIHRAAGPEL +ACYK
Sbjct: 87  FPLSSSSVLKINKGDITKWFVDGSSDAIVNPANEKMLGGGGADGAIHRAAGPELVDACYK 146

Query: 653 VPEVRRGVRCPTGEARVTPAFQLPVSRVIHTVGPIYDDHEKPEVLLESAYRNSLTLAKEN 474
           VPEVR G+RCPTGEAR+TP F+LP S VIHTVGPIYD +     +L++AYRNSL++AK+N
Sbjct: 147 VPEVRPGIRCPTGEARITPGFKLPASHVIHTVGPIYDANRNSAAILKNAYRNSLSVAKDN 206

Query: 473 SIQYIAFPAISCGVYGYPYEEAATISISVIKEFAGDFKEVHFVLFSDDIYNIWLERASML 294
           +I++IAFPAISCGVY YP+EEAA++SIS IKEFA D KEVHFVLFSD+I+N+W+++A  L
Sbjct: 207 NIKFIAFPAISCGVYLYPFEEAASVSISTIKEFADDIKEVHFVLFSDEIFNVWVKKAKEL 266

Query: 293 L 291
           L
Sbjct: 267 L 267


>ref|XP_002881729.1| hypothetical protein ARALYDRAFT_483117 [Arabidopsis lyrata subsp.
           lyrata] gi|297327568|gb|EFH57988.1| hypothetical protein
           ARALYDRAFT_483117 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score =  276 bits (705), Expect = 8e-72
 Identities = 129/181 (71%), Positives = 152/181 (83%)
 Frame = -1

Query: 833 FSLGSSSLLKLQMGDITKWSIDGLSDAIVNAANERMLGGGGVDGAIHRAAGPELREACYK 654
           F+L  SSLLK+  GDITKWS+D  SDAIV  ANERMLGGGG DGAIHRAAGP+LR ACY+
Sbjct: 73  FNLSDSSLLKILKGDITKWSVDSSSDAIVTPANERMLGGGGADGAIHRAAGPQLRAACYE 132

Query: 653 VPEVRRGVRCPTGEARVTPAFQLPVSRVIHTVGPIYDDHEKPEVLLESAYRNSLTLAKEN 474
           VPEVR GVRCPTGEARVTP F LP SRVIHTVGPIYD    P+  L +AY+NSL +AKEN
Sbjct: 133 VPEVRPGVRCPTGEARVTPGFNLPASRVIHTVGPIYDSDVNPQESLTNAYKNSLRVAKEN 192

Query: 473 SIQYIAFPAISCGVYGYPYEEAATISISVIKEFAGDFKEVHFVLFSDDIYNIWLERASML 294
           +I+YIAFPAISCG+YGYP++EAA I IS IK+F+ DFKEVHFVLF+DDI+++W+ +A  +
Sbjct: 193 NIKYIAFPAISCGIYGYPFDEAAAIGISTIKQFSNDFKEVHFVLFADDIFSVWVNKAKEV 252

Query: 293 L 291
           L
Sbjct: 253 L 253


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