BLASTX nr result

ID: Coptis25_contig00021311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021311
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623539.1| hypothetical protein MTR_7g072170 [Medicago ...    57   2e-06
gb|ACU19112.1| unknown [Glycine max]                                   57   2e-06
ref|XP_003623535.1| hypothetical protein MTR_7g072120 [Medicago ...    56   3e-06
ref|XP_003552292.1| PREDICTED: protein LURP-one-related 15-like ...    55   8e-06

>ref|XP_003623539.1| hypothetical protein MTR_7g072170 [Medicago truncatula]
           gi|355498554|gb|AES79757.1| hypothetical protein
           MTR_7g072170 [Medicago truncatula]
          Length = 226

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/74 (43%), Positives = 42/74 (56%)
 Frame = +3

Query: 15  SESQAMQPANPIAVIGPQYCTSVPLTFTVVRKVRSINDGNLAAVDVKGNIMDILLRVRVS 194
           S S    P  P  + GPQYC   PL   VV+KV +I+DGN    DV GN   I+ +V+VS
Sbjct: 10  SASAPPMPVLPTTIFGPQYCAPYPLDLAVVKKVIAISDGNFVVTDVNGN---IVFKVKVS 66

Query: 195 RSIFFQGDNVLLDA 236
             + F+   VL+DA
Sbjct: 67  -LLTFRDRRVLVDA 79


>gb|ACU19112.1| unknown [Glycine max]
          Length = 216

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/44 (54%), Positives = 31/44 (70%)
 Frame = +3

Query: 36  PANPIAVIGPQYCTSVPLTFTVVRKVRSINDGNLAAVDVKGNIM 167
           PA P AVIGPQ+C S PL   VV+KV +++DGN    DV GN++
Sbjct: 20  PAVPTAVIGPQFCASYPLDLAVVKKVMTLSDGNFVVTDVNGNVV 63


>ref|XP_003623535.1| hypothetical protein MTR_7g072120 [Medicago truncatula]
           gi|355498550|gb|AES79753.1| hypothetical protein
           MTR_7g072120 [Medicago truncatula]
           gi|388494416|gb|AFK35274.1| unknown [Medicago
           truncatula]
          Length = 212

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +3

Query: 15  SESQAMQPANPIAVIGPQYCTSVPLTFTVVRKVRSINDGNLAAVDVKGNIMDILLRVRVS 194
           S S  M P    A+ GPQYC   P+   VV+KV +I+DGN A  DV GNI+      +V 
Sbjct: 10  SASAPMPPLPTAAIFGPQYCAPYPVDLAVVKKVMTISDGNFAVTDVNGNIV-----FKVK 64

Query: 195 RSIFFQGD-NVLLDA 236
            S+    D  VLLDA
Sbjct: 65  GSLLTLRDRRVLLDA 79


>ref|XP_003552292.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]
          Length = 216

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/44 (52%), Positives = 30/44 (68%)
 Frame = +3

Query: 36  PANPIAVIGPQYCTSVPLTFTVVRKVRSINDGNLAAVDVKGNIM 167
           PA P AVIGPQ+C   PL   VV+KV +++DGN    DV GN++
Sbjct: 20  PAVPTAVIGPQFCAPYPLDLAVVKKVMTLSDGNFVVTDVNGNVV 63


Top