BLASTX nr result

ID: Coptis25_contig00021304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021304
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279372.1| PREDICTED: uncharacterized protein LOC100257...    57   2e-06
emb|CBI27819.3| unnamed protein product [Vitis vinifera]               57   2e-06
gb|AFW64281.1| hypothetical protein ZEAMMB73_455211 [Zea mays]         56   4e-06
gb|AFW64279.1| hypothetical protein ZEAMMB73_455211 [Zea mays] g...    56   4e-06
gb|ACR38174.1| unknown [Zea mays]                                      56   4e-06

>ref|XP_002279372.1| PREDICTED: uncharacterized protein LOC100257610 [Vitis vinifera]
          Length = 805

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +2

Query: 2   RDRSFMRHFVDTQLFSVHTDLVLSFYQKD 88
           RDR FM+HFVDTQLFSVHTDLVLSF+QK+
Sbjct: 777 RDRPFMKHFVDTQLFSVHTDLVLSFFQKE 805


>emb|CBI27819.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +2

Query: 2   RDRSFMRHFVDTQLFSVHTDLVLSFYQKD 88
           RDR FM+HFVDTQLFSVHTDLVLSF+QK+
Sbjct: 760 RDRPFMKHFVDTQLFSVHTDLVLSFFQKE 788


>gb|AFW64281.1| hypothetical protein ZEAMMB73_455211 [Zea mays]
          Length = 213

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +2

Query: 2   RDRSFMRHFVDTQLFSVHTDLVLSFYQKD 88
           RDR FM+ FVDTQLFSVHTDLVLSFYQKD
Sbjct: 185 RDRPFMKLFVDTQLFSVHTDLVLSFYQKD 213


>gb|AFW64279.1| hypothetical protein ZEAMMB73_455211 [Zea mays]
           gi|413924348|gb|AFW64280.1| hypothetical protein
           ZEAMMB73_455211 [Zea mays]
          Length = 830

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +2

Query: 2   RDRSFMRHFVDTQLFSVHTDLVLSFYQKD 88
           RDR FM+ FVDTQLFSVHTDLVLSFYQKD
Sbjct: 802 RDRPFMKLFVDTQLFSVHTDLVLSFYQKD 830


>gb|ACR38174.1| unknown [Zea mays]
          Length = 576

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +2

Query: 2   RDRSFMRHFVDTQLFSVHTDLVLSFYQKD 88
           RDR FM+ FVDTQLFSVHTDLVLSFYQKD
Sbjct: 548 RDRPFMKLFVDTQLFSVHTDLVLSFYQKD 576


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